RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
DENND4A-205ENST00000562540 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.63
DENND4A-205ENST00000562540 PHF8Q9UPP1 1060 aa11.1□□□□□ -0.63
DENND4A-205ENST00000562540 SOX12O15370 315 aa11.09□□□□□ -0.63
DENND4A-205ENST00000562540 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.64
DENND4A-205ENST00000562540 LSM11P83369 360 aaKnown RBP eCLIP11.06□□□□□ -0.64
DENND4A-205ENST00000562540 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
DENND4A-205ENST00000562540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.05□□□□□ -0.64
DENND4A-205ENST00000562540 ZFP91Q96JP5 570 aaPredicted RBP11.05□□□□□ -0.64
DENND4A-205ENST00000562540 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.65
DENND4A-205ENST00000562540 POTEEQ6S8J3 1075 aa10.99□□□□□ -0.65
DENND4A-205ENST00000562540 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
DENND4A-205ENST00000562540 NUDT7P0C024 238 aa10.96□□□□□ -0.65
DENND4A-205ENST00000562540 AXIN2Q9Y2T1 843 aa10.96□□□□□ -0.65
DENND4A-205ENST00000562540 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
DENND4A-205ENST00000562540 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
DENND4A-205ENST00000562540 KIF3CO14782 793 aa10.93□□□□□ -0.66
DENND4A-205ENST00000562540 PBX2P40425 430 aa10.93□□□□□ -0.66
DENND4A-205ENST00000562540 NLRP6P59044 892 aa10.92□□□□□ -0.66
DENND4A-205ENST00000562540 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
DENND4A-205ENST00000562540 C2orf72A6NCS6 295 aa10.91□□□□□ -0.66
DENND4A-205ENST00000562540 MFRPQ9BY79 579 aa10.87□□□□□ -0.67
DENND4A-205ENST00000562540 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
DENND4A-205ENST00000562540 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
DENND4A-205ENST00000562540 PCDHGA4Q9Y5G9 962 aa10.87□□□□□ -0.67
DENND4A-205ENST00000562540 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
DENND4A-205ENST00000562540 ADGRD1Q6QNK2 874 aa10.84□□□□□ -0.67
DENND4A-205ENST00000562540 SLC34A2O95436 690 aa10.83□□□□□ -0.68
DENND4A-205ENST00000562540 STK24Q9Y6E0 443 aa10.81□□□□□ -0.68
DENND4A-205ENST00000562540 ARHGAP33O14559 1287 aa10.79□□□□□ -0.68
DENND4A-205ENST00000562540 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
DENND4A-205ENST00000562540 STK25O00506 426 aa10.76□□□□□ -0.69
DENND4A-205ENST00000562540 HRO43593 1189 aa10.76□□□□□ -0.69
DENND4A-205ENST00000562540 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
DENND4A-205ENST00000562540 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
DENND4A-205ENST00000562540 KDM4FA0A1W2PPD8 638 aa10.73□□□□□ -0.69
DENND4A-205ENST00000562540 PSEN2P49810 448 aa10.73□□□□□ -0.69
DENND4A-205ENST00000562540 TK2O00142 265 aa10.72□□□□□ -0.69
DENND4A-205ENST00000562540 PSDA5PKW4 1024 aaPredicted RBP10.7□□□□□ -0.7
DENND4A-205ENST00000562540 PKD2Q13563 968 aa10.7□□□□□ -0.7
DENND4A-205ENST00000562540 KCTD12Q96CX2 325 aaKnown RBP10.7□□□□□ -0.7
DENND4A-205ENST00000562540 RGL2O15211 777 aa10.69□□□□□ -0.7
DENND4A-205ENST00000562540 PPP1R37O75864 691 aa10.66□□□□□ -0.7
DENND4A-205ENST00000562540 PTCD2Q8WV60 388 aaKnown RBP10.65□□□□□ -0.7
DENND4A-205ENST00000562540 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
DENND4A-205ENST00000562540 KCNK17Q96T54 332 aa10.59□□□□□ -0.71
DENND4A-205ENST00000562540 PTPN5P54829 565 aa10.58□□□□□ -0.72
DENND4A-205ENST00000562540 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
DENND4A-205ENST00000562540 FOXK1P85037 733 aa10.57□□□□□ -0.72
DENND4A-205ENST00000562540 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
DENND4A-205ENST00000562540 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
DENND4A-205ENST00000562540 DSG2Q14126 1118 aa10.52□□□□□ -0.73
DENND4A-205ENST00000562540 IFFO2Q5TF58 517 aa10.52□□□□□ -0.73
DENND4A-205ENST00000562540 IRX2Q9BZI1 471 aaPredicted RBP10.52□□□□□ -0.73
DENND4A-205ENST00000562540 RGS20O76081 388 aa10.51□□□□□ -0.73
DENND4A-205ENST00000562540 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
DENND4A-205ENST00000562540 KCNH8Q96L42 1107 aa10.5□□□□□ -0.73
DENND4A-205ENST00000562540 TBC1D12O60347 775 aa10.49□□□□□ -0.73
DENND4A-205ENST00000562540 A0A0G2JS52 829 aa10.48□□□□□ -0.73
DENND4A-205ENST00000562540 THSD4Q6ZMP0 1018 aa10.48□□□□□ -0.73
DENND4A-205ENST00000562540 HS6ST3Q8IZP7 471 aa10.48□□□□□ -0.73
DENND4A-205ENST00000562540 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.73
DENND4A-205ENST00000562540 ZNF454Q8N9F8 522 aa10.44□□□□□ -0.74
DENND4A-205ENST00000562540 SLC4A5Q9BY07 1137 aa10.44□□□□□ -0.74
DENND4A-205ENST00000562540 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
DENND4A-205ENST00000562540 OXER1Q8TDS5 423 aa10.43□□□□□ -0.74
DENND4A-205ENST00000562540 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
DENND4A-205ENST00000562540 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
DENND4A-205ENST00000562540 WNT2BQ93097 391 aa10.41□□□□□ -0.74
DENND4A-205ENST00000562540 ZBED2Q9BTP6 218 aa10.4□□□□□ -0.74
DENND4A-205ENST00000562540 GOLGA8CPA6NN73 597 aa10.38□□□□□ -0.75
DENND4A-205ENST00000562540 FOSBP53539 338 aa10.38□□□□□ -0.75
DENND4A-205ENST00000562540 MRPL50Q8N5N7 158 aaKnown RBP10.38□□□□□ -0.75
DENND4A-205ENST00000562540 PTPREP23469 700 aa10.37□□□□□ -0.75
DENND4A-205ENST00000562540 RYDENQ9NUL5 291 aaKnown RBP10.32□□□□□ -0.76
DENND4A-205ENST00000562540 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
DENND4A-205ENST00000562540 ADAM33Q9BZ11 813 aa10.31□□□□□ -0.76
DENND4A-205ENST00000562540 DNAJC5Q9H3Z4 198 aa10.31□□□□□ -0.76
DENND4A-205ENST00000562540 JPH4Q96JJ6 628 aa10.3□□□□□ -0.76
DENND4A-205ENST00000562540 NBPF3Q9H094 633 aa10.3□□□□□ -0.76
DENND4A-205ENST00000562540 PPP1R15BQ5SWA1 713 aa10.29□□□□□ -0.76
DENND4A-205ENST00000562540 CRISPLD2Q9H0B8 497 aa10.29□□□□□ -0.76
DENND4A-205ENST00000562540 ITGBL1O95965 494 aaPredicted RBP10.28□□□□□ -0.76
DENND4A-205ENST00000562540 Q6ZNB5 142 aa10.28□□□□□ -0.76
DENND4A-205ENST00000562540 ZDHHC16Q969W1 377 aa10.28□□□□□ -0.76
DENND4A-205ENST00000562540 ANO8Q9HCE9 1232 aaPredicted RBP10.28□□□□□ -0.76
DENND4A-205ENST00000562540 EVI5O60447 810 aa10.25□□□□□ -0.77
DENND4A-205ENST00000562540 BCAMP50895 628 aa10.24□□□□□ -0.77
DENND4A-205ENST00000562540 PROX2Q3B8N5 592 aa10.23□□□□□ -0.77
DENND4A-205ENST00000562540 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
DENND4A-205ENST00000562540 NCKAP5LQ9HCH0 1330 aa10.22□□□□□ -0.77
DENND4A-205ENST00000562540 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
DENND4A-205ENST00000562540 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.77
DENND4A-205ENST00000562540 LCE2BO14633 110 aa10.19□□□□□ -0.78
DENND4A-205ENST00000562540 COL9A1P20849 921 aa10.19□□□□□ -0.78
DENND4A-205ENST00000562540 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
DENND4A-205ENST00000562540 DCAF8L2P0C7V8 631 aa10.17□□□□□ -0.78
DENND4A-205ENST00000562540 PDE4AP27815 886 aa10.17□□□□□ -0.78
DENND4A-205ENST00000562540 PCDHGA10Q9Y5H3 936 aa10.16□□□□□ -0.78
DENND4A-205ENST00000562540 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms