RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 VPS8Q8N3P4 1428 aa30.83■■■□□ 2.53
TMEM249-202ENST00000562477 MTUS2Q5JR59 1369 aa30.83■■■□□ 2.53
TMEM249-202ENST00000562477 CDC42BPBQ9Y5S2 1711 aa30.79■■■□□ 2.52
TMEM249-202ENST00000562477 PREX2Q70Z35 1606 aa30.78■■■□□ 2.52
TMEM249-202ENST00000562477 POGZQ7Z3K3 1410 aa30.78■■■□□ 2.52
TMEM249-202ENST00000562477 CDC42BPAQ5VT25 1732 aa30.74■■■□□ 2.51
TMEM249-202ENST00000562477 ZMYM4Q5VZL5 1548 aa30.73■■■□□ 2.51
TMEM249-202ENST00000562477 EHBP1L1Q8N3D4 1523 aa30.73■■■□□ 2.51
TMEM249-202ENST00000562477 GPATCH8Q9UKJ3 1502 aaKnown RBP30.73■■■□□ 2.51
TMEM249-202ENST00000562477 ARHGEF40Q8TER5 1519 aa30.71■■■□□ 2.51
TMEM249-202ENST00000562477 YEATS2Q9ULM3 1422 aa30.71■■■□□ 2.51
TMEM249-202ENST00000562477 CCNB3Q8WWL7 1395 aa30.68■■■□□ 2.5
TMEM249-202ENST00000562477 TIAM1Q13009 1591 aa30.68■■■□□ 2.5
TMEM249-202ENST00000562477 AFAP1Q8N556 730 aa30.68■■■□□ 2.5
TMEM249-202ENST00000562477 ARHGEF12Q9NZN5 1544 aa30.68■■■□□ 2.5
TMEM249-202ENST00000562477 ZNF777Q9ULD5 760 aaPredicted RBP30.67■■■□□ 2.5
TMEM249-202ENST00000562477 ABCC1P33527 1531 aa30.66■■■□□ 2.5
TMEM249-202ENST00000562477 ZFYVE16Q7Z3T8 1539 aa30.66■■■□□ 2.5
TMEM249-202ENST00000562477 TRAPPC8Q9Y2L5 1435 aa30.64■■■□□ 2.5
TMEM249-202ENST00000562477 ZNF518AQ6AHZ1 1483 aa30.63■■■□□ 2.49
TMEM249-202ENST00000562477 MAGI2Q86UL8 1455 aa30.63■■■□□ 2.49
TMEM249-202ENST00000562477 CFDP1Q9UEE9 299 aaPredicted RBP30.62■■■□□ 2.49
TMEM249-202ENST00000562477 ARID4BQ4LE39 1312 aaPredicted RBP30.61■■■□□ 2.49
TMEM249-202ENST00000562477 SAMD9LQ8IVG5 1584 aa30.61■■■□□ 2.49
TMEM249-202ENST00000562477 KDM5CP41229 1560 aa30.59■■■□□ 2.49
TMEM249-202ENST00000562477 NCOA2Q15596 1464 aa30.58■■■□□ 2.49
TMEM249-202ENST00000562477 KANK4Q5T7N3 995 aaPredicted RBP30.58■■■□□ 2.49
TMEM249-202ENST00000562477 ITSN2Q9NZM3 1697 aa30.58■■■□□ 2.49
TMEM249-202ENST00000562477 LRRC9Q6ZRR7 1453 aa30.57■■■□□ 2.48
TMEM249-202ENST00000562477 HNRNPMP52272 730 aaKnown RBP eCLIP30.55■■■□□ 2.48
TMEM249-202ENST00000562477 SYCP2Q9BX26 1530 aa30.55■■■□□ 2.48
TMEM249-202ENST00000562477 ZNF644Q9H582 1327 aaPredicted RBP30.54■■■□□ 2.48
TMEM249-202ENST00000562477 SIGLEC1Q9BZZ2 1709 aa30.54■■■□□ 2.48
TMEM249-202ENST00000562477 SUPT6HQ7KZ85 1726 aaKnown RBP30.53■■■□□ 2.48
TMEM249-202ENST00000562477 MYT1LQ9UL68 1186 aa30.53■■■□□ 2.48
TMEM249-202ENST00000562477 MAP3K1Q13233 1512 aa30.52■■■□□ 2.48
TMEM249-202ENST00000562477 ATP10AO60312 1499 aa30.51■■■□□ 2.48
TMEM249-202ENST00000562477 HECW2Q9P2P5 1572 aa30.5■■■□□ 2.47
TMEM249-202ENST00000562477 BCORL1Q5H9F3 1711 aa30.49■■■□□ 2.47
TMEM249-202ENST00000562477 ADAMTSL3P82987 1691 aa30.49■■■□□ 2.47
TMEM249-202ENST00000562477 KIAA1107Q9UPP5 1409 aa30.48■■■□□ 2.47
TMEM249-202ENST00000562477 MLH3Q9UHC1 1453 aa30.48■■■□□ 2.47
TMEM249-202ENST00000562477 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
TMEM249-202ENST00000562477 PLEKHH2Q8IVE3 1493 aa30.47■■■□□ 2.47
TMEM249-202ENST00000562477 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.47
TMEM249-202ENST00000562477 ABCA6Q8N139 1617 aa30.44■■■□□ 2.46
TMEM249-202ENST00000562477 MLECQ14165 292 aa30.43■■■□□ 2.46
TMEM249-202ENST00000562477 APLP2Q06481 763 aa30.42■■■□□ 2.46
TMEM249-202ENST00000562477 MADDQ8WXG6 1647 aa30.41■■■□□ 2.46
TMEM249-202ENST00000562477 SPAG9O60271 1321 aaKnown RBP30.41■■■□□ 2.46
TMEM249-202ENST00000562477 KIDINS220Q9ULH0 1771 aa30.41■■■□□ 2.46
TMEM249-202ENST00000562477 MBD5Q9P267 1494 aa30.39■■■□□ 2.46
TMEM249-202ENST00000562477 PTPRMP28827 1452 aa30.37■■■□□ 2.45
TMEM249-202ENST00000562477 CAMSAP2Q08AD1 1489 aa30.37■■■□□ 2.45
TMEM249-202ENST00000562477 REREQ9P2R6 1566 aa30.32■■■□□ 2.44
TMEM249-202ENST00000562477 ATP7AQ04656 1500 aa30.32■■■□□ 2.44
TMEM249-202ENST00000562477 RIMS1Q86UR5 1692 aaKnown RBP30.3■■■□□ 2.44
TMEM249-202ENST00000562477 INO80Q9ULG1 1556 aaPredicted RBP30.3■■■□□ 2.44
TMEM249-202ENST00000562477 MYOM3Q5VTT5 1437 aa30.3■■■□□ 2.44
TMEM249-202ENST00000562477 CCDC141Q6ZP82 1450 aa30.25■■■□□ 2.43
TMEM249-202ENST00000562477 PLPPR3Q6T4P5 718 aa30.25■■■□□ 2.43
TMEM249-202ENST00000562477 AGLP35573 1532 aa30.24■■■□□ 2.43
TMEM249-202ENST00000562477 FER1L4A9Z1Z3 1794 aa30.22■■■□□ 2.43
TMEM249-202ENST00000562477 MIA2Q96PC5 1412 aa30.22■■■□□ 2.43
TMEM249-202ENST00000562477 A2MP01023 1474 aa30.19■■■□□ 2.42
TMEM249-202ENST00000562477 RTEL1-TNFRSF6BF6WH68 1400 aa30.19■■■□□ 2.42
TMEM249-202ENST00000562477 ARHGEF5Q12774 1597 aa30.19■■■□□ 2.42
TMEM249-202ENST00000562477 RSPH4AQ5TD94 716 aa30.17■■■□□ 2.42
TMEM249-202ENST00000562477 PLXNC1O60486 1568 aa30.15■■■□□ 2.42
TMEM249-202ENST00000562477 CEBPAP49715 358 aaPredicted RBP30.13■■■□□ 2.41
TMEM249-202ENST00000562477 FGD6Q6ZV73 1430 aa30.12■■■□□ 2.41
TMEM249-202ENST00000562477 TSPY4P0CV99 314 aa30.11■■■□□ 2.41
TMEM249-202ENST00000562477 TSPY10P0CW01 314 aa30.11■■■□□ 2.41
TMEM249-202ENST00000562477 PTPN23Q9H3S7 1636 aa30.1■■■□□ 2.41
TMEM249-202ENST00000562477 ADGBQ8N7X0 1667 aa30.1■■■□□ 2.41
TMEM249-202ENST00000562477 DHX29Q7Z478 1369 aaKnown RBP30.08■■■□□ 2.41
TMEM249-202ENST00000562477 PPARGC1BQ86YN6 1023 aaKnown RBP30.05■■■□□ 2.4
TMEM249-202ENST00000562477 GGT6Q6P531 493 aa30.04■■■□□ 2.4
TMEM249-202ENST00000562477 ESF1Q9H501 851 aaKnown RBP30.04■■■□□ 2.4
TMEM249-202ENST00000562477 TCOF1Q13428 1488 aaKnown RBP30.04■■■□□ 2.4
TMEM249-202ENST00000562477 ABCC5O15440 1437 aa30.02■■■□□ 2.4
TMEM249-202ENST00000562477 MAST1Q9Y2H9 1570 aa30.02■■■□□ 2.4
TMEM249-202ENST00000562477 LMTK3Q96Q04 1460 aa30■■■□□ 2.39
TMEM249-202ENST00000562477 CNTLNQ9NXG0 1405 aa29.98■■■□□ 2.39
TMEM249-202ENST00000562477 KIF3BO15066 747 aa29.98■■■□□ 2.39
TMEM249-202ENST00000562477 DAPK1P53355 1430 aa29.96■■■□□ 2.39
TMEM249-202ENST00000562477 C3P01024 1663 aa29.95■■■□□ 2.39
TMEM249-202ENST00000562477 FAM50AQ14320 339 aaKnown RBP29.94■■■□□ 2.38
TMEM249-202ENST00000562477 HSPA2P54652 639 aa29.93■■■□□ 2.38
TMEM249-202ENST00000562477 SHANK2Q9UPX8 1470 aa29.93■■■□□ 2.38
TMEM249-202ENST00000562477 DNMT1P26358 1616 aaKnown RBP29.93■■■□□ 2.38
TMEM249-202ENST00000562477 CROCC2H7BZ55 1655 aa29.92■■■□□ 2.38
TMEM249-202ENST00000562477 ZMYM3Q14202 1370 aa29.91■■■□□ 2.38
TMEM249-202ENST00000562477 CLTCQ00610 1675 aaKnown RBP29.91■■■□□ 2.38
TMEM249-202ENST00000562477 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
TMEM249-202ENST00000562477 RRP7BPQ9NSQ0 103 aa29.88■■■□□ 2.37
TMEM249-202ENST00000562477 KIF15Q9NS87 1388 aa29.88■■■□□ 2.37
TMEM249-202ENST00000562477 PPP6R1Q9UPN7 881 aa29.87■■■□□ 2.37
TMEM249-202ENST00000562477 MROH2AA6NES4 1674 aa29.87■■■□□ 2.37
TMEM249-202ENST00000562477 DUOX2Q9NRD8 1548 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms