RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 CDC42BPBQ9Y5S2 1711 aa33.62■■■□□ 2.97
NR4A1-219ENST00000562373 MTUS2Q5JR59 1369 aa33.59■■■□□ 2.97
NR4A1-219ENST00000562373 POGZQ7Z3K3 1410 aa33.56■■■□□ 2.96
NR4A1-219ENST00000562373 ARID4BQ4LE39 1312 aaPredicted RBP33.55■■■□□ 2.96
NR4A1-219ENST00000562373 YEATS2Q9ULM3 1422 aa33.55■■■□□ 2.96
NR4A1-219ENST00000562373 AFAP1Q8N556 730 aa33.55■■■□□ 2.96
NR4A1-219ENST00000562373 PREX2Q70Z35 1606 aa33.54■■■□□ 2.96
NR4A1-219ENST00000562373 ZNF777Q9ULD5 760 aaPredicted RBP33.54■■■□□ 2.96
NR4A1-219ENST00000562373 CDC42BPAQ5VT25 1732 aa33.53■■■□□ 2.96
NR4A1-219ENST00000562373 ZMYM4Q5VZL5 1548 aa33.51■■■□□ 2.95
NR4A1-219ENST00000562373 GPATCH8Q9UKJ3 1502 aaKnown RBP33.5■■■□□ 2.95
NR4A1-219ENST00000562373 VPS8Q8N3P4 1428 aa33.5■■■□□ 2.95
NR4A1-219ENST00000562373 ARHGEF40Q8TER5 1519 aa33.49■■■□□ 2.95
NR4A1-219ENST00000562373 ZFYVE16Q7Z3T8 1539 aa33.48■■■□□ 2.95
NR4A1-219ENST00000562373 ARHGEF12Q9NZN5 1544 aa33.48■■■□□ 2.95
NR4A1-219ENST00000562373 MYT1LQ9UL68 1186 aa33.46■■■□□ 2.95
NR4A1-219ENST00000562373 CCNB3Q8WWL7 1395 aa33.46■■■□□ 2.95
NR4A1-219ENST00000562373 TRAPPC8Q9Y2L5 1435 aa33.44■■■□□ 2.94
NR4A1-219ENST00000562373 MAGI2Q86UL8 1455 aa33.44■■■□□ 2.94
NR4A1-219ENST00000562373 CFDP1Q9UEE9 299 aaPredicted RBP33.43■■■□□ 2.94
NR4A1-219ENST00000562373 ZNF518AQ6AHZ1 1483 aa33.42■■■□□ 2.94
NR4A1-219ENST00000562373 EHBP1L1Q8N3D4 1523 aa33.42■■■□□ 2.94
NR4A1-219ENST00000562373 ABCC1P33527 1531 aa33.41■■■□□ 2.94
NR4A1-219ENST00000562373 HNRNPMP52272 730 aaKnown RBP eCLIP33.4■■■□□ 2.94
NR4A1-219ENST00000562373 SIGLEC1Q9BZZ2 1709 aa33.39■■■□□ 2.94
NR4A1-219ENST00000562373 TIAM1Q13009 1591 aa33.38■■■□□ 2.93
NR4A1-219ENST00000562373 SAMD9LQ8IVG5 1584 aa33.38■■■□□ 2.93
NR4A1-219ENST00000562373 MLECQ14165 292 aa33.37■■■□□ 2.93
NR4A1-219ENST00000562373 ITSN2Q9NZM3 1697 aa33.36■■■□□ 2.93
NR4A1-219ENST00000562373 BCORL1Q5H9F3 1711 aa33.36■■■□□ 2.93
NR4A1-219ENST00000562373 KDM5CP41229 1560 aa33.35■■■□□ 2.93
NR4A1-219ENST00000562373 ADAMTSL3P82987 1691 aa33.35■■■□□ 2.93
NR4A1-219ENST00000562373 ZNF644Q9H582 1327 aaPredicted RBP33.34■■■□□ 2.93
NR4A1-219ENST00000562373 ATP10AO60312 1499 aa33.34■■■□□ 2.93
NR4A1-219ENST00000562373 KANK4Q5T7N3 995 aaPredicted RBP33.34■■■□□ 2.93
NR4A1-219ENST00000562373 SYCP2Q9BX26 1530 aa33.3■■■□□ 2.92
NR4A1-219ENST00000562373 NCOA2Q15596 1464 aa33.3■■■□□ 2.92
NR4A1-219ENST00000562373 HECW2Q9P2P5 1572 aa33.28■■■□□ 2.92
NR4A1-219ENST00000562373 LRRC9Q6ZRR7 1453 aa33.27■■■□□ 2.92
NR4A1-219ENST00000562373 MADDQ8WXG6 1647 aa33.27■■■□□ 2.92
NR4A1-219ENST00000562373 C9orf84Q5VXU9 1444 aa33.27■■■□□ 2.92
NR4A1-219ENST00000562373 MLH3Q9UHC1 1453 aa33.26■■■□□ 2.92
NR4A1-219ENST00000562373 SUPT6HQ7KZ85 1726 aaKnown RBP33.25■■■□□ 2.91
NR4A1-219ENST00000562373 PTPRMP28827 1452 aa33.25■■■□□ 2.91
NR4A1-219ENST00000562373 DIP2CQ9Y2E4 1556 aa33.23■■■□□ 2.91
NR4A1-219ENST00000562373 PLPPR3Q6T4P5 718 aa33.23■■■□□ 2.91
NR4A1-219ENST00000562373 ABCA6Q8N139 1617 aa33.21■■■□□ 2.91
NR4A1-219ENST00000562373 KIAA1107Q9UPP5 1409 aa33.21■■■□□ 2.91
NR4A1-219ENST00000562373 SPAG9O60271 1321 aaKnown RBP33.21■■■□□ 2.91
NR4A1-219ENST00000562373 PLEKHH2Q8IVE3 1493 aa33.19■■■□□ 2.9
NR4A1-219ENST00000562373 KIDINS220Q9ULH0 1771 aa33.19■■■□□ 2.9
NR4A1-219ENST00000562373 RIMS1Q86UR5 1692 aaKnown RBP33.18■■■□□ 2.9
NR4A1-219ENST00000562373 MAP3K1Q13233 1512 aa33.18■■■□□ 2.9
NR4A1-219ENST00000562373 APLP2Q06481 763 aa33.17■■■□□ 2.9
NR4A1-219ENST00000562373 MBD5Q9P267 1494 aa33.12■■■□□ 2.89
NR4A1-219ENST00000562373 CAMSAP2Q08AD1 1489 aa33.07■■■□□ 2.88
NR4A1-219ENST00000562373 REREQ9P2R6 1566 aa33.06■■■□□ 2.88
NR4A1-219ENST00000562373 ATP7AQ04656 1500 aa33.06■■■□□ 2.88
NR4A1-219ENST00000562373 FER1L4A9Z1Z3 1794 aa33.06■■■□□ 2.88
NR4A1-219ENST00000562373 CEBPAP49715 358 aaPredicted RBP33.03■■■□□ 2.88
NR4A1-219ENST00000562373 INO80Q9ULG1 1556 aaPredicted RBP33.02■■■□□ 2.88
NR4A1-219ENST00000562373 AGLP35573 1532 aa33■■■□□ 2.87
NR4A1-219ENST00000562373 MYOM3Q5VTT5 1437 aa32.96■■■□□ 2.87
NR4A1-219ENST00000562373 A2MP01023 1474 aa32.95■■■□□ 2.87
NR4A1-219ENST00000562373 CCDC141Q6ZP82 1450 aa32.95■■■□□ 2.87
NR4A1-219ENST00000562373 RSPH4AQ5TD94 716 aa32.94■■■□□ 2.86
NR4A1-219ENST00000562373 ESF1Q9H501 851 aaKnown RBP32.91■■■□□ 2.86
NR4A1-219ENST00000562373 RTEL1-TNFRSF6BF6WH68 1400 aa32.91■■■□□ 2.86
NR4A1-219ENST00000562373 MIA2Q96PC5 1412 aa32.89■■■□□ 2.86
NR4A1-219ENST00000562373 TSPY4P0CV99 314 aa32.89■■■□□ 2.86
NR4A1-219ENST00000562373 TSPY10P0CW01 314 aa32.89■■■□□ 2.86
NR4A1-219ENST00000562373 GGT6Q6P531 493 aa32.88■■■□□ 2.85
NR4A1-219ENST00000562373 ARHGEF5Q12774 1597 aa32.87■■■□□ 2.85
NR4A1-219ENST00000562373 PLXNC1O60486 1568 aa32.85■■■□□ 2.85
NR4A1-219ENST00000562373 ADGBQ8N7X0 1667 aa32.85■■■□□ 2.85
NR4A1-219ENST00000562373 LMTK3Q96Q04 1460 aa32.84■■■□□ 2.85
NR4A1-219ENST00000562373 HSPA2P54652 639 aa32.83■■■□□ 2.85
NR4A1-219ENST00000562373 DHX29Q7Z478 1369 aaKnown RBP32.83■■■□□ 2.85
NR4A1-219ENST00000562373 KIF3BO15066 747 aa32.78■■■□□ 2.84
NR4A1-219ENST00000562373 PPARGC1BQ86YN6 1023 aaKnown RBP32.78■■■□□ 2.84
NR4A1-219ENST00000562373 PTPN23Q9H3S7 1636 aa32.77■■■□□ 2.84
NR4A1-219ENST00000562373 C3P01024 1663 aa32.76■■■□□ 2.84
NR4A1-219ENST00000562373 FGD6Q6ZV73 1430 aa32.76■■■□□ 2.83
NR4A1-219ENST00000562373 CNTLNQ9NXG0 1405 aa32.73■■■□□ 2.83
NR4A1-219ENST00000562373 ZMYM3Q14202 1370 aa32.72■■■□□ 2.83
NR4A1-219ENST00000562373 ABCC5O15440 1437 aa32.7■■■□□ 2.83
NR4A1-219ENST00000562373 CLTCQ00610 1675 aaKnown RBP32.7■■■□□ 2.83
NR4A1-219ENST00000562373 MAST1Q9Y2H9 1570 aa32.69■■■□□ 2.82
NR4A1-219ENST00000562373 TCOF1Q13428 1488 aaKnown RBP32.67■■■□□ 2.82
NR4A1-219ENST00000562373 FAM50AQ14320 339 aaKnown RBP32.65■■■□□ 2.82
NR4A1-219ENST00000562373 CHIC2Q9UKJ5 165 aa32.65■■■□□ 2.82
NR4A1-219ENST00000562373 PREX1Q8TCU6 1659 aa32.64■■■□□ 2.82
NR4A1-219ENST00000562373 SETD1BQ9UPS6 1966 aaKnown RBP32.63■■■□□ 2.81
NR4A1-219ENST00000562373 DAPK1P53355 1430 aa32.63■■■□□ 2.81
NR4A1-219ENST00000562373 RRP7BPQ9NSQ0 103 aa32.63■■■□□ 2.81
NR4A1-219ENST00000562373 PPP6R1Q9UPN7 881 aa32.63■■■□□ 2.81
NR4A1-219ENST00000562373 MROH2AA6NES4 1674 aa32.62■■■□□ 2.81
NR4A1-219ENST00000562373 UHRF1BP1Q6BDS2 1440 aa32.6■■■□□ 2.81
NR4A1-219ENST00000562373 DNMT1P26358 1616 aaKnown RBP32.58■■■□□ 2.81
NR4A1-219ENST00000562373 CROCC2H7BZ55 1655 aa32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms