RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ITSN2Q9NZM3 1697 aa21.26■□□□□ 0.99
CDH1-204ENST00000562118 FRMPD1Q5SYB0 1578 aa21.26■□□□□ 0.99
CDH1-204ENST00000562118 RICTORQ6R327 1708 aa21.24■□□□□ 0.99
CDH1-204ENST00000562118 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
CDH1-204ENST00000562118 AKNAQ7Z591 1439 aa21.22■□□□□ 0.99
CDH1-204ENST00000562118 ABCC1P33527 1531 aa21.2■□□□□ 0.98
CDH1-204ENST00000562118 ARHGAP5Q13017 1502 aa21.2■□□□□ 0.98
CDH1-204ENST00000562118 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
CDH1-204ENST00000562118 SAMD9LQ8IVG5 1584 aa21.19■□□□□ 0.98
CDH1-204ENST00000562118 ZMYM4Q5VZL5 1548 aa21.18■□□□□ 0.98
CDH1-204ENST00000562118 ADGRL1O94910 1474 aa21.16■□□□□ 0.98
CDH1-204ENST00000562118 KDM5CP41229 1560 aa21.15■□□□□ 0.98
CDH1-204ENST00000562118 POGZQ7Z3K3 1410 aa21.14■□□□□ 0.98
CDH1-204ENST00000562118 CCNB3Q8WWL7 1395 aa21.14■□□□□ 0.98
CDH1-204ENST00000562118 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.97
CDH1-204ENST00000562118 DENND4BO75064 1496 aaPredicted RBP21.13■□□□□ 0.97
CDH1-204ENST00000562118 ARHGEF12Q9NZN5 1544 aa21.13■□□□□ 0.97
CDH1-204ENST00000562118 KIAA1107Q9UPP5 1409 aa21.12■□□□□ 0.97
CDH1-204ENST00000562118 PLEKHH2Q8IVE3 1493 aa21.1■□□□□ 0.97
CDH1-204ENST00000562118 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
CDH1-204ENST00000562118 MIA2Q96PC5 1412 aa21.09■□□□□ 0.97
CDH1-204ENST00000562118 SCAPERQ9BY12 1400 aa21.09■□□□□ 0.97
CDH1-204ENST00000562118 ZNF518AQ6AHZ1 1483 aa21.08■□□□□ 0.97
CDH1-204ENST00000562118 APLP2Q06481 763 aa21.07■□□□□ 0.96
CDH1-204ENST00000562118 ARHGEF40Q8TER5 1519 aa21.07■□□□□ 0.96
CDH1-204ENST00000562118 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
CDH1-204ENST00000562118 MAGI2Q86UL8 1455 aa21.07■□□□□ 0.96
CDH1-204ENST00000562118 MBD5Q9P267 1494 aa21.06■□□□□ 0.96
CDH1-204ENST00000562118 CAMSAP2Q08AD1 1489 aa21.04■□□□□ 0.96
CDH1-204ENST00000562118 ARHGEF5Q12774 1597 aa21.03■□□□□ 0.96
CDH1-204ENST00000562118 HECW2Q9P2P5 1572 aa21.03■□□□□ 0.96
CDH1-204ENST00000562118 CFDP1Q9UEE9 299 aaPredicted RBP21.03■□□□□ 0.96
CDH1-204ENST00000562118 TRAPPC8Q9Y2L5 1435 aa21.03■□□□□ 0.96
CDH1-204ENST00000562118 MLH3Q9UHC1 1453 aa21.02■□□□□ 0.96
CDH1-204ENST00000562118 RAPGEF3O95398 923 aa21.02■□□□□ 0.96
CDH1-204ENST00000562118 TCOF1Q13428 1488 aaKnown RBP21.01■□□□□ 0.95
CDH1-204ENST00000562118 INO80Q9ULG1 1556 aaPredicted RBP21.01■□□□□ 0.95
CDH1-204ENST00000562118 KIDINS220Q9ULH0 1771 aa21■□□□□ 0.95
CDH1-204ENST00000562118 PTPN23Q9H3S7 1636 aa20.99■□□□□ 0.95
CDH1-204ENST00000562118 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
CDH1-204ENST00000562118 REREQ9P2R6 1566 aa20.98■□□□□ 0.95
CDH1-204ENST00000562118 FGD6Q6ZV73 1430 aa20.98■□□□□ 0.95
CDH1-204ENST00000562118 DIP2CQ9Y2E4 1556 aa20.96■□□□□ 0.95
CDH1-204ENST00000562118 ZNF644Q9H582 1327 aaPredicted RBP20.96■□□□□ 0.95
CDH1-204ENST00000562118 ABCA6Q8N139 1617 aa20.96■□□□□ 0.95
CDH1-204ENST00000562118 SIGLEC1Q9BZZ2 1709 aa20.95■□□□□ 0.94
CDH1-204ENST00000562118 CCDC141Q6ZP82 1450 aa20.94■□□□□ 0.94
CDH1-204ENST00000562118 MAST1Q9Y2H9 1570 aa20.94■□□□□ 0.94
CDH1-204ENST00000562118 CROCC2H7BZ55 1655 aa20.94■□□□□ 0.94
CDH1-204ENST00000562118 YEATS2Q9ULM3 1422 aa20.94■□□□□ 0.94
CDH1-204ENST00000562118 AFAP1Q8N556 730 aa20.92■□□□□ 0.94
CDH1-204ENST00000562118 ATP7AQ04656 1500 aa20.92■□□□□ 0.94
CDH1-204ENST00000562118 RTEL1-TNFRSF6BF6WH68 1400 aa20.91■□□□□ 0.94
CDH1-204ENST00000562118 DNMT1P26358 1616 aaKnown RBP20.91■□□□□ 0.94
CDH1-204ENST00000562118 HNRNPMP52272 730 aaKnown RBP eCLIP20.89■□□□□ 0.93
CDH1-204ENST00000562118 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
CDH1-204ENST00000562118 PLXNC1O60486 1568 aa20.89■□□□□ 0.93
CDH1-204ENST00000562118 ATP10AO60312 1499 aa20.88■□□□□ 0.93
CDH1-204ENST00000562118 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
CDH1-204ENST00000562118 RSPH4AQ5TD94 716 aa20.88■□□□□ 0.93
CDH1-204ENST00000562118 ADGBQ8N7X0 1667 aa20.87■□□□□ 0.93
CDH1-204ENST00000562118 C9orf84Q5VXU9 1444 aa20.87■□□□□ 0.93
CDH1-204ENST00000562118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.85■□□□□ 0.93
CDH1-204ENST00000562118 AGLP35573 1532 aa20.85■□□□□ 0.93
CDH1-204ENST00000562118 BCORL1Q5H9F3 1711 aa20.84■□□□□ 0.93
CDH1-204ENST00000562118 RRBP1Q9P2E9 1410 aaKnown RBP20.84■□□□□ 0.93
CDH1-204ENST00000562118 ABCC5O15440 1437 aa20.83■□□□□ 0.93
CDH1-204ENST00000562118 ADAMTSL3P82987 1691 aa20.82■□□□□ 0.92
CDH1-204ENST00000562118 SPAG9O60271 1321 aaKnown RBP20.81■□□□□ 0.92
CDH1-204ENST00000562118 DAPK1P53355 1430 aa20.81■□□□□ 0.92
CDH1-204ENST00000562118 ADGRL2O95490 1459 aa20.77■□□□□ 0.92
CDH1-204ENST00000562118 A2MP01023 1474 aa20.75■□□□□ 0.91
CDH1-204ENST00000562118 EIF2AK4Q9P2K8 1649 aaKnown RBP20.73■□□□□ 0.91
CDH1-204ENST00000562118 KDM4FA0A1W2PPD8 638 aa20.71■□□□□ 0.91
CDH1-204ENST00000562118 PPARGC1BQ86YN6 1023 aaKnown RBP20.71■□□□□ 0.91
CDH1-204ENST00000562118 DHX29Q7Z478 1369 aaKnown RBP20.71■□□□□ 0.91
CDH1-204ENST00000562118 PTPRKQ15262 1439 aa20.7■□□□□ 0.9
CDH1-204ENST00000562118 MADDQ8WXG6 1647 aa20.7■□□□□ 0.9
CDH1-204ENST00000562118 DUOX2Q9NRD8 1548 aa20.69■□□□□ 0.9
CDH1-204ENST00000562118 RNF17Q9BXT8 1623 aaKnown RBP20.69■□□□□ 0.9
CDH1-204ENST00000562118 TSPY4P0CV99 314 aa20.69■□□□□ 0.9
CDH1-204ENST00000562118 TSPY10P0CW01 314 aa20.69■□□□□ 0.9
CDH1-204ENST00000562118 FER1L4A9Z1Z3 1794 aa20.68■□□□□ 0.9
CDH1-204ENST00000562118 NCOA1Q15788 1441 aa20.68■□□□□ 0.9
CDH1-204ENST00000562118 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
CDH1-204ENST00000562118 ROCK1Q13464 1354 aa20.66■□□□□ 0.9
CDH1-204ENST00000562118 DEPDC5O75140 1603 aa20.64■□□□□ 0.9
CDH1-204ENST00000562118 MROH1Q8NDA8 1641 aa20.64■□□□□ 0.9
CDH1-204ENST00000562118 ERBINQ96RT1 1412 aa20.64■□□□□ 0.89
CDH1-204ENST00000562118 MROH2AA6NES4 1674 aa20.63■□□□□ 0.89
CDH1-204ENST00000562118 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
CDH1-204ENST00000562118 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
CDH1-204ENST00000562118 ANKRD30AQ9BXX3 1397 aa20.61■□□□□ 0.89
CDH1-204ENST00000562118 RIMS1Q86UR5 1692 aaKnown RBP20.61■□□□□ 0.89
CDH1-204ENST00000562118 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
CDH1-204ENST00000562118 PRDM15P57071 1507 aaPredicted RBP20.59■□□□□ 0.89
CDH1-204ENST00000562118 KDM5DQ9BY66 1539 aa20.58■□□□□ 0.89
CDH1-204ENST00000562118 ZC3H13Q5T200 1668 aaKnown RBP20.58■□□□□ 0.88
CDH1-204ENST00000562118 PTPRMP28827 1452 aa20.57■□□□□ 0.88
CDH1-204ENST00000562118 GCC2Q8IWJ2 1684 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms