RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 CHGAP10645 457 aaKnown RBP15.24■□□□□ 0.03
LINC01243-201ENST00000562065 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
LINC01243-201ENST00000562065 HS3ST6Q96QI5 342 aa15.22■□□□□ 0.03
LINC01243-201ENST00000562065 HOXB1P14653 301 aaPredicted RBP15.2■□□□□ 0.02
LINC01243-201ENST00000562065 PPP1R37O75864 691 aa15.16■□□□□ 0.02
LINC01243-201ENST00000562065 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
LINC01243-201ENST00000562065 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
LINC01243-201ENST00000562065 ERBB3P21860 1342 aa15.15■□□□□ 0.02
LINC01243-201ENST00000562065 C2orf72A6NCS6 295 aa15.14■□□□□ 0.01
LINC01243-201ENST00000562065 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
LINC01243-201ENST00000562065 TMC2Q8TDI7 906 aa15.11■□□□□ 0.01
LINC01243-201ENST00000562065 ZSWIM6Q9HCJ5 1215 aa15.11■□□□□ 0.01
LINC01243-201ENST00000562065 KIF3CO14782 793 aa15.07■□□□□ 0
LINC01243-201ENST00000562065 ARSIQ5FYB1 569 aa15.07■□□□□ 0
LINC01243-201ENST00000562065 VARS2Q5ST30 1063 aaKnown RBP15.06■□□□□ 0
LINC01243-201ENST00000562065 GPR153Q6NV75 609 aa15.06■□□□□ 0
LINC01243-201ENST00000562065 NKX1-1Q15270 411 aaPredicted RBP15.02■□□□□ -0
LINC01243-201ENST00000562065 SPNS2Q8IVW8 549 aa15.02■□□□□ -0
LINC01243-201ENST00000562065 KHSRPQ92945 711 aaKnown RBP eCLIP15.02■□□□□ -0
LINC01243-201ENST00000562065 KRTAP3-3Q9BYR6 98 aa15.02■□□□□ -0
LINC01243-201ENST00000562065 KRTAP3-2Q9BYR7 98 aa15.02■□□□□ -0
LINC01243-201ENST00000562065 RYDENQ9NUL5 291 aaKnown RBP14.96□□□□□ -0.01
LINC01243-201ENST00000562065 MMRN1Q13201 1228 aa14.95□□□□□ -0.02
LINC01243-201ENST00000562065 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
LINC01243-201ENST00000562065 NUDT7P0C024 238 aa14.93□□□□□ -0.02
LINC01243-201ENST00000562065 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
LINC01243-201ENST00000562065 PCDHGA4Q9Y5G9 962 aa14.91□□□□□ -0.02
LINC01243-201ENST00000562065 ZNF687Q8N1G0 1237 aa14.89□□□□□ -0.03
LINC01243-201ENST00000562065 SLC34A2O95436 690 aa14.88□□□□□ -0.03
LINC01243-201ENST00000562065 PLPP6Q8IY26 295 aa14.87□□□□□ -0.03
LINC01243-201ENST00000562065 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
LINC01243-201ENST00000562065 FOXK1P85037 733 aa14.85□□□□□ -0.03
LINC01243-201ENST00000562065 DSG2Q14126 1118 aa14.84□□□□□ -0.03
LINC01243-201ENST00000562065 LHX6Q9UPM6 363 aa14.83□□□□□ -0.04
LINC01243-201ENST00000562065 GTPBP6O43824 516 aaPredicted RBP14.8□□□□□ -0.04
LINC01243-201ENST00000562065 PTCD2Q8WV60 388 aaKnown RBP14.75□□□□□ -0.05
LINC01243-201ENST00000562065 ANKRD13DQ6ZTN6 518 aa14.74□□□□□ -0.05
LINC01243-201ENST00000562065 TBC1D12O60347 775 aa14.73□□□□□ -0.05
LINC01243-201ENST00000562065 CRISPLD2Q9H0B8 497 aa14.73□□□□□ -0.05
LINC01243-201ENST00000562065 PPP1R15BQ5SWA1 713 aa14.72□□□□□ -0.05
LINC01243-201ENST00000562065 UPF1Q92900 1129 aaKnown RBP eCLIP14.72□□□□□ -0.05
LINC01243-201ENST00000562065 PDE4AP27815 886 aa14.7□□□□□ -0.06
LINC01243-201ENST00000562065 AXIN2Q9Y2T1 843 aa14.69□□□□□ -0.06
LINC01243-201ENST00000562065 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
LINC01243-201ENST00000562065 LSM11P83369 360 aaKnown RBP eCLIP14.68□□□□□ -0.06
LINC01243-201ENST00000562065 PBX2P40425 430 aa14.67□□□□□ -0.06
LINC01243-201ENST00000562065 PSDA5PKW4 1024 aaPredicted RBP14.66□□□□□ -0.06
LINC01243-201ENST00000562065 RNF166Q96A37 237 aaPredicted RBP14.66□□□□□ -0.06
LINC01243-201ENST00000562065 LARP6Q9BRS8 491 aaKnown RBP14.66□□□□□ -0.06
LINC01243-201ENST00000562065 MYT1LQ9UL68 1186 aa14.66□□□□□ -0.06
LINC01243-201ENST00000562065 AMER1Q5JTC6 1135 aaPredicted RBP14.63□□□□□ -0.07
LINC01243-201ENST00000562065 KDM4FA0A1W2PPD8 638 aa14.62□□□□□ -0.07
LINC01243-201ENST00000562065 OXER1Q8TDS5 423 aa14.62□□□□□ -0.07
LINC01243-201ENST00000562065 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
LINC01243-201ENST00000562065 POTEEQ6S8J3 1075 aa14.61□□□□□ -0.07
LINC01243-201ENST00000562065 PPP4R3BQ5MIZ7 849 aa14.6□□□□□ -0.07
LINC01243-201ENST00000562065 PTGER2P43116 358 aa14.58□□□□□ -0.08
LINC01243-201ENST00000562065 ARHGAP33O14559 1287 aa14.57□□□□□ -0.08
LINC01243-201ENST00000562065 RTN4Q9NQC3 1192 aaKnown RBP14.57□□□□□ -0.08
LINC01243-201ENST00000562065 CADPS2Q86UW7 1296 aa14.55□□□□□ -0.08
LINC01243-201ENST00000562065 BBXQ8WY36 941 aaPredicted RBP14.55□□□□□ -0.08
LINC01243-201ENST00000562065 PSEN2P49810 448 aa14.53□□□□□ -0.08
LINC01243-201ENST00000562065 ZNF454Q8N9F8 522 aa14.52□□□□□ -0.09
LINC01243-201ENST00000562065 MFSD10Q14728 455 aa14.51□□□□□ -0.09
LINC01243-201ENST00000562065 KCNH8Q96L42 1107 aa14.5□□□□□ -0.09
LINC01243-201ENST00000562065 MAP3K9P80192 1104 aa14.49□□□□□ -0.09
LINC01243-201ENST00000562065 KCNK17Q96T54 332 aa14.49□□□□□ -0.09
LINC01243-201ENST00000562065 DMRTA1Q5VZB9 504 aa14.48□□□□□ -0.09
LINC01243-201ENST00000562065 ADGRD1Q6QNK2 874 aa14.48□□□□□ -0.09
LINC01243-201ENST00000562065 EVI5O60447 810 aa14.47□□□□□ -0.09
LINC01243-201ENST00000562065 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.46□□□□□ -0.09
LINC01243-201ENST00000562065 EMILIN3Q9NT22 766 aa14.44□□□□□ -0.1
LINC01243-201ENST00000562065 SPRYD3Q8NCJ5 442 aa14.43□□□□□ -0.1
LINC01243-201ENST00000562065 FOSBP53539 338 aa14.41□□□□□ -0.1
LINC01243-201ENST00000562065 TK2O00142 265 aa14.4□□□□□ -0.1
LINC01243-201ENST00000562065 JPH4Q96JJ6 628 aa14.39□□□□□ -0.11
LINC01243-201ENST00000562065 STAC3Q96MF2 364 aa14.39□□□□□ -0.11
LINC01243-201ENST00000562065 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
LINC01243-201ENST00000562065 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
LINC01243-201ENST00000562065 NISCHQ9Y2I1 1504 aa14.37□□□□□ -0.11
LINC01243-201ENST00000562065 BCL2L12Q9HB09 334 aa14.37□□□□□ -0.11
LINC01243-201ENST00000562065 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
LINC01243-201ENST00000562065 PTPREP23469 700 aa14.35□□□□□ -0.11
LINC01243-201ENST00000562065 ZDHHC16Q969W1 377 aa14.35□□□□□ -0.11
LINC01243-201ENST00000562065 HRO43593 1189 aa14.32□□□□□ -0.12
LINC01243-201ENST00000562065 ADAM33Q9BZ11 813 aa14.32□□□□□ -0.12
LINC01243-201ENST00000562065 DPYSL4O14531 572 aa14.31□□□□□ -0.12
LINC01243-201ENST00000562065 VPS9D1Q9Y2B5 631 aa14.3□□□□□ -0.12
LINC01243-201ENST00000562065 CAMK2BQ13554 666 aa14.28□□□□□ -0.12
LINC01243-201ENST00000562065 KCTD12Q96CX2 325 aaKnown RBP14.28□□□□□ -0.12
LINC01243-201ENST00000562065 PCDHGA10Q9Y5H3 936 aa14.27□□□□□ -0.13
LINC01243-201ENST00000562065 HCSTQ9UBK5 93 aa14.25□□□□□ -0.13
LINC01243-201ENST00000562065 TYW1BQ6NUM6 668 aa14.23□□□□□ -0.13
LINC01243-201ENST00000562065 ZBED2Q9BTP6 218 aa14.23□□□□□ -0.13
LINC01243-201ENST00000562065 PHF14O94880 888 aa14.21□□□□□ -0.13
LINC01243-201ENST00000562065 SLC4A5Q9BY07 1137 aa14.21□□□□□ -0.13
LINC01243-201ENST00000562065 FBXW7Q969H0 707 aa14.2□□□□□ -0.14
LINC01243-201ENST00000562065 WDR70Q9NW82 654 aa14.2□□□□□ -0.14
LINC01243-201ENST00000562065 GOLGA8CPA6NN73 597 aa14.19□□□□□ -0.14
LINC01243-201ENST00000562065 DDX12PQ92771 950 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms