RNA–Protein interactions for RNA: ENST00000561996.1

CPT1A-207, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-207ENST00000561996 LRRIQ1Q96JM4 1722 aa30.07■■■□□ 2.4
CPT1A-207ENST00000561996 ARID4BQ4LE39 1312 aaPredicted RBP30.06■■■□□ 2.4
CPT1A-207ENST00000561996 ADAMTSL3P82987 1691 aa30.04■■■□□ 2.4
CPT1A-207ENST00000561996 ZFYVE16Q7Z3T8 1539 aa30.03■■■□□ 2.4
CPT1A-207ENST00000561996 ARHGAP5Q13017 1502 aa30.01■■■□□ 2.39
CPT1A-207ENST00000561996 BCORL1Q5H9F3 1711 aa30■■■□□ 2.39
CPT1A-207ENST00000561996 PTPRMP28827 1452 aa29.99■■■□□ 2.39
CPT1A-207ENST00000561996 YEATS2Q9ULM3 1422 aa29.98■■■□□ 2.39
CPT1A-207ENST00000561996 ZNF518AQ6AHZ1 1483 aa29.97■■■□□ 2.39
CPT1A-207ENST00000561996 HECW2Q9P2P5 1572 aa29.96■■■□□ 2.39
CPT1A-207ENST00000561996 PREX2Q70Z35 1606 aa29.9■■■□□ 2.38
CPT1A-207ENST00000561996 ATP10AO60312 1499 aa29.9■■■□□ 2.38
CPT1A-207ENST00000561996 MADDQ8WXG6 1647 aa29.89■■■□□ 2.38
CPT1A-207ENST00000561996 KDM5CP41229 1560 aa29.89■■■□□ 2.38
CPT1A-207ENST00000561996 CDC42BPBQ9Y5S2 1711 aa29.88■■■□□ 2.37
CPT1A-207ENST00000561996 C9orf84Q5VXU9 1444 aa29.87■■■□□ 2.37
CPT1A-207ENST00000561996 AFAP1Q8N556 730 aa29.86■■■□□ 2.37
CPT1A-207ENST00000561996 CEP162Q5TB80 1403 aa29.86■■■□□ 2.37
CPT1A-207ENST00000561996 ABCC1P33527 1531 aa29.83■■■□□ 2.37
CPT1A-207ENST00000561996 MLH3Q9UHC1 1453 aa29.81■■■□□ 2.36
CPT1A-207ENST00000561996 MTUS2Q5JR59 1369 aa29.79■■■□□ 2.36
CPT1A-207ENST00000561996 GPATCH8Q9UKJ3 1502 aaKnown RBP29.79■■■□□ 2.36
CPT1A-207ENST00000561996 CDC42BPAQ5VT25 1732 aa29.78■■■□□ 2.36
CPT1A-207ENST00000561996 SIGLEC1Q9BZZ2 1709 aa29.78■■■□□ 2.36
CPT1A-207ENST00000561996 TRAPPC8Q9Y2L5 1435 aa29.77■■■□□ 2.36
CPT1A-207ENST00000561996 ARHGEF12Q9NZN5 1544 aa29.76■■■□□ 2.36
CPT1A-207ENST00000561996 RIMS1Q86UR5 1692 aaKnown RBP29.76■■■□□ 2.36
CPT1A-207ENST00000561996 MYT1LQ9UL68 1186 aa29.76■■■□□ 2.35
CPT1A-207ENST00000561996 REREQ9P2R6 1566 aa29.74■■■□□ 2.35
CPT1A-207ENST00000561996 MLECQ14165 292 aa29.74■■■□□ 2.35
CPT1A-207ENST00000561996 CCNB3Q8WWL7 1395 aa29.73■■■□□ 2.35
CPT1A-207ENST00000561996 ITSN2Q9NZM3 1697 aa29.72■■■□□ 2.35
CPT1A-207ENST00000561996 DIP2CQ9Y2E4 1556 aa29.72■■■□□ 2.35
CPT1A-207ENST00000561996 CFDP1Q9UEE9 299 aaPredicted RBP29.71■■■□□ 2.35
CPT1A-207ENST00000561996 PLEKHH2Q8IVE3 1493 aa29.71■■■□□ 2.35
CPT1A-207ENST00000561996 ZNF777Q9ULD5 760 aaPredicted RBP29.7■■■□□ 2.35
CPT1A-207ENST00000561996 KIAA1107Q9UPP5 1409 aa29.7■■■□□ 2.34
CPT1A-207ENST00000561996 EHBP1L1Q8N3D4 1523 aa29.69■■■□□ 2.34
CPT1A-207ENST00000561996 SAMD9LQ8IVG5 1584 aa29.67■■■□□ 2.34
CPT1A-207ENST00000561996 FER1L4A9Z1Z3 1794 aa29.66■■■□□ 2.34
CPT1A-207ENST00000561996 ABCA6Q8N139 1617 aa29.65■■■□□ 2.34
CPT1A-207ENST00000561996 LMTK3Q96Q04 1460 aa29.65■■■□□ 2.34
CPT1A-207ENST00000561996 AGLP35573 1532 aa29.65■■■□□ 2.34
CPT1A-207ENST00000561996 SYCP2Q9BX26 1530 aa29.63■■■□□ 2.33
CPT1A-207ENST00000561996 SPAG9O60271 1321 aaKnown RBP29.61■■■□□ 2.33
CPT1A-207ENST00000561996 HNRNPMP52272 730 aaKnown RBP eCLIP29.6■■■□□ 2.33
CPT1A-207ENST00000561996 KIDINS220Q9ULH0 1771 aa29.59■■■□□ 2.33
CPT1A-207ENST00000561996 LOC105371045A0A1W2PR82 267 aa29.59■■■□□ 2.33
CPT1A-207ENST00000561996 TIAM1Q13009 1591 aa29.57■■■□□ 2.32
CPT1A-207ENST00000561996 VPS8Q8N3P4 1428 aa29.57■■■□□ 2.32
CPT1A-207ENST00000561996 PLPPR3Q6T4P5 718 aa29.56■■■□□ 2.32
CPT1A-207ENST00000561996 ESF1Q9H501 851 aaKnown RBP29.51■■■□□ 2.31
CPT1A-207ENST00000561996 ATP7AQ04656 1500 aa29.5■■■□□ 2.31
CPT1A-207ENST00000561996 NCOA2Q15596 1464 aa29.48■■■□□ 2.31
CPT1A-207ENST00000561996 INO80Q9ULG1 1556 aaPredicted RBP29.48■■■□□ 2.31
CPT1A-207ENST00000561996 CNTLNQ9NXG0 1405 aa29.48■■■□□ 2.31
CPT1A-207ENST00000561996 SUPT6HQ7KZ85 1726 aaKnown RBP29.47■■■□□ 2.31
CPT1A-207ENST00000561996 MBD5Q9P267 1494 aa29.47■■■□□ 2.31
CPT1A-207ENST00000561996 ZNF644Q9H582 1327 aaPredicted RBP29.46■■■□□ 2.31
CPT1A-207ENST00000561996 CEBPAP49715 358 aaPredicted RBP29.46■■■□□ 2.31
CPT1A-207ENST00000561996 HSPA2P54652 639 aa29.44■■■□□ 2.3
CPT1A-207ENST00000561996 ILDR1Q86SU0 546 aaPredicted RBP29.44■■■□□ 2.3
CPT1A-207ENST00000561996 MAP3K1Q13233 1512 aa29.44■■■□□ 2.3
CPT1A-207ENST00000561996 A2MP01023 1474 aa29.43■■■□□ 2.3
CPT1A-207ENST00000561996 RSPH4AQ5TD94 716 aa29.43■■■□□ 2.3
CPT1A-207ENST00000561996 RTEL1-TNFRSF6BF6WH68 1400 aa29.43■■■□□ 2.3
CPT1A-207ENST00000561996 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
CPT1A-207ENST00000561996 PLXNC1O60486 1568 aa29.41■■■□□ 2.3
CPT1A-207ENST00000561996 PREX1Q8TCU6 1659 aa29.4■■■□□ 2.3
CPT1A-207ENST00000561996 SETD1BQ9UPS6 1966 aaKnown RBP29.39■■■□□ 2.29
CPT1A-207ENST00000561996 UHRF1BP1Q6BDS2 1440 aa29.38■■■□□ 2.29
CPT1A-207ENST00000561996 CAMSAP2Q08AD1 1489 aa29.36■■■□□ 2.29
CPT1A-207ENST00000561996 CCDC141Q6ZP82 1450 aa29.36■■■□□ 2.29
CPT1A-207ENST00000561996 PPP6R1Q9UPN7 881 aa29.35■■■□□ 2.29
CPT1A-207ENST00000561996 C3P01024 1663 aa29.34■■■□□ 2.29
CPT1A-207ENST00000561996 ADGBQ8N7X0 1667 aa29.33■■■□□ 2.29
CPT1A-207ENST00000561996 MROH2AA6NES4 1674 aa29.31■■■□□ 2.28
CPT1A-207ENST00000561996 DHX29Q7Z478 1369 aaKnown RBP29.3■■■□□ 2.28
CPT1A-207ENST00000561996 NPATQ14207 1427 aa29.29■■■□□ 2.28
CPT1A-207ENST00000561996 ZMYM3Q14202 1370 aa29.29■■■□□ 2.28
CPT1A-207ENST00000561996 ARHGEF5Q12774 1597 aa29.28■■■□□ 2.28
CPT1A-207ENST00000561996 KANK4Q5T7N3 995 aaPredicted RBP29.27■■■□□ 2.28
CPT1A-207ENST00000561996 GGT6Q6P531 493 aa29.26■■■□□ 2.27
CPT1A-207ENST00000561996 TSPY4P0CV99 314 aa29.25■■■□□ 2.27
CPT1A-207ENST00000561996 TSPY10P0CW01 314 aa29.25■■■□□ 2.27
CPT1A-207ENST00000561996 DMRT2Q9Y5R5 561 aa29.25■■■□□ 2.27
CPT1A-207ENST00000561996 MIA2Q96PC5 1412 aa29.25■■■□□ 2.27
CPT1A-207ENST00000561996 APLP2Q06481 763 aa29.23■■■□□ 2.27
CPT1A-207ENST00000561996 FBXO41Q8TF61 875 aa29.23■■■□□ 2.27
CPT1A-207ENST00000561996 MYOM3Q5VTT5 1437 aa29.21■■■□□ 2.27
CPT1A-207ENST00000561996 CLTCQ00610 1675 aaKnown RBP29.17■■■□□ 2.26
CPT1A-207ENST00000561996 FAM135AQ9P2D6 1515 aa29.16■■■□□ 2.26
CPT1A-207ENST00000561996 PTPRKQ15262 1439 aa29.15■■■□□ 2.26
CPT1A-207ENST00000561996 KIF3BO15066 747 aa29.15■■■□□ 2.26
CPT1A-207ENST00000561996 MAST1Q9Y2H9 1570 aa29.13■■■□□ 2.25
CPT1A-207ENST00000561996 STRCQ7RTU9 1775 aa29.11■■■□□ 2.25
CPT1A-207ENST00000561996 PTPRTO14522 1441 aa29.11■■■□□ 2.25
CPT1A-207ENST00000561996 NCOA1Q15788 1441 aa29.09■■■□□ 2.25
CPT1A-207ENST00000561996 KDM5DQ9BY66 1539 aa29.07■■■□□ 2.24
CPT1A-207ENST00000561996 WASHC2CQ9Y4E1 1318 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms