RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 GLI2P10070 1586 aa17.41■□□□□ 0.38
PCAT1-202ENST00000561978 MAGI3Q5TCQ9 1506 aa17.39■□□□□ 0.37
PCAT1-202ENST00000561978 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
PCAT1-202ENST00000561978 MAP3K4Q9Y6R4 1608 aa17.38■□□□□ 0.37
PCAT1-202ENST00000561978 CD109Q6YHK3 1445 aa17.36■□□□□ 0.37
PCAT1-202ENST00000561978 TROQ12816 1431 aaPredicted RBP17.36■□□□□ 0.37
PCAT1-202ENST00000561978 KIF14Q15058 1648 aa17.35■□□□□ 0.37
PCAT1-202ENST00000561978 PPRC1Q5VV67 1664 aaKnown RBP17.35■□□□□ 0.37
PCAT1-202ENST00000561978 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
PCAT1-202ENST00000561978 KANK4Q5T7N3 995 aaPredicted RBP17.35■□□□□ 0.37
PCAT1-202ENST00000561978 ABCA9Q8IUA7 1624 aa17.34■□□□□ 0.37
PCAT1-202ENST00000561978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCAT1-202ENST00000561978 TTC37Q6PGP7 1564 aa17.33■□□□□ 0.37
PCAT1-202ENST00000561978 MTUS2Q5JR59 1369 aa17.32■□□□□ 0.36
PCAT1-202ENST00000561978 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
PCAT1-202ENST00000561978 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
PCAT1-202ENST00000561978 TEX14Q8IWB6 1497 aa17.27■□□□□ 0.35
PCAT1-202ENST00000561978 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
PCAT1-202ENST00000561978 LRRC9Q6ZRR7 1453 aa17.24■□□□□ 0.35
PCAT1-202ENST00000561978 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
PCAT1-202ENST00000561978 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
PCAT1-202ENST00000561978 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
PCAT1-202ENST00000561978 PLCH2O75038 1416 aa17.22■□□□□ 0.35
PCAT1-202ENST00000561978 FANCAO15360 1455 aa17.21■□□□□ 0.35
PCAT1-202ENST00000561978 COL17A1Q9UMD9 1497 aaPredicted RBP17.21■□□□□ 0.35
PCAT1-202ENST00000561978 KDM6BO15054 1643 aa17.21■□□□□ 0.35
PCAT1-202ENST00000561978 CDC42BPBQ9Y5S2 1711 aa17.2■□□□□ 0.34
PCAT1-202ENST00000561978 CDC42BPAQ5VT25 1732 aa17.19■□□□□ 0.34
PCAT1-202ENST00000561978 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
PCAT1-202ENST00000561978 SUPT6HQ7KZ85 1726 aaKnown RBP17.19■□□□□ 0.34
PCAT1-202ENST00000561978 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
PCAT1-202ENST00000561978 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
PCAT1-202ENST00000561978 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
PCAT1-202ENST00000561978 PREX2Q70Z35 1606 aa17.17■□□□□ 0.34
PCAT1-202ENST00000561978 NEO1Q92859 1461 aa17.17■□□□□ 0.34
PCAT1-202ENST00000561978 AKNAQ7Z591 1439 aa17.16■□□□□ 0.34
PCAT1-202ENST00000561978 EFCAB2Q5VUJ9 269 aa17.16■□□□□ 0.34
PCAT1-202ENST00000561978 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
PCAT1-202ENST00000561978 RAPGEF3O95398 923 aa17.15■□□□□ 0.34
PCAT1-202ENST00000561978 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
PCAT1-202ENST00000561978 ARAP3Q8WWN8 1544 aa17.14■□□□□ 0.33
PCAT1-202ENST00000561978 CFDP1Q9UEE9 299 aaPredicted RBP17.14■□□□□ 0.33
PCAT1-202ENST00000561978 ADGRL1O94910 1474 aa17.13■□□□□ 0.33
PCAT1-202ENST00000561978 CFAP74Q9C0B2 1584 aa17.13■□□□□ 0.33
PCAT1-202ENST00000561978 PHLDB1Q86UU1 1377 aa17.11■□□□□ 0.33
PCAT1-202ENST00000561978 SCAPERQ9BY12 1400 aa17.1■□□□□ 0.33
PCAT1-202ENST00000561978 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
PCAT1-202ENST00000561978 ZNF644Q9H582 1327 aaPredicted RBP17.1■□□□□ 0.33
PCAT1-202ENST00000561978 SAMD9LQ8IVG5 1584 aa17.08■□□□□ 0.32
PCAT1-202ENST00000561978 DENND4BO75064 1496 aaPredicted RBP17.08■□□□□ 0.32
PCAT1-202ENST00000561978 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
PCAT1-202ENST00000561978 FRMPD1Q5SYB0 1578 aa17.06■□□□□ 0.32
PCAT1-202ENST00000561978 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
PCAT1-202ENST00000561978 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
PCAT1-202ENST00000561978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCAT1-202ENST00000561978 RICTORQ6R327 1708 aa17.05■□□□□ 0.32
PCAT1-202ENST00000561978 ABCC1P33527 1531 aa17.05■□□□□ 0.32
PCAT1-202ENST00000561978 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCAT1-202ENST00000561978 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
PCAT1-202ENST00000561978 SYCP2Q9BX26 1530 aa17.04■□□□□ 0.32
PCAT1-202ENST00000561978 POGZQ7Z3K3 1410 aa17.03■□□□□ 0.32
PCAT1-202ENST00000561978 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
PCAT1-202ENST00000561978 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
PCAT1-202ENST00000561978 CAMSAP2Q08AD1 1489 aa17.01■□□□□ 0.31
PCAT1-202ENST00000561978 ITGAEP38570 1179 aa17.01■□□□□ 0.31
PCAT1-202ENST00000561978 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
PCAT1-202ENST00000561978 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
PCAT1-202ENST00000561978 DIEXFQ68CQ4 756 aaKnown RBP16.99■□□□□ 0.31
PCAT1-202ENST00000561978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCAT1-202ENST00000561978 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
PCAT1-202ENST00000561978 SETD5Q9C0A6 1442 aa16.98■□□□□ 0.31
PCAT1-202ENST00000561978 KIAA1107Q9UPP5 1409 aa16.98■□□□□ 0.31
PCAT1-202ENST00000561978 MIA2Q96PC5 1412 aa16.98■□□□□ 0.31
PCAT1-202ENST00000561978 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
PCAT1-202ENST00000561978 FGD6Q6ZV73 1430 aa16.97■□□□□ 0.31
PCAT1-202ENST00000561978 MBD5Q9P267 1494 aa16.96■□□□□ 0.31
PCAT1-202ENST00000561978 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
PCAT1-202ENST00000561978 KDM5CP41229 1560 aa16.96■□□□□ 0.31
PCAT1-202ENST00000561978 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
PCAT1-202ENST00000561978 ZMYM4Q5VZL5 1548 aa16.95■□□□□ 0.3
PCAT1-202ENST00000561978 RAB3GAP2Q9H2M9 1393 aa16.95■□□□□ 0.3
PCAT1-202ENST00000561978 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
PCAT1-202ENST00000561978 C1QBPQ07021 282 aaKnown RBP16.93■□□□□ 0.3
PCAT1-202ENST00000561978 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
PCAT1-202ENST00000561978 HECW2Q9P2P5 1572 aa16.92■□□□□ 0.3
PCAT1-202ENST00000561978 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
PCAT1-202ENST00000561978 CCDC141Q6ZP82 1450 aa16.91■□□□□ 0.3
PCAT1-202ENST00000561978 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
PCAT1-202ENST00000561978 ARHGEF40Q8TER5 1519 aa16.9■□□□□ 0.3
PCAT1-202ENST00000561978 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
PCAT1-202ENST00000561978 KIDINS220Q9ULH0 1771 aa16.9■□□□□ 0.3
PCAT1-202ENST00000561978 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
PCAT1-202ENST00000561978 ERICH6Q7L0X2 663 aa16.88■□□□□ 0.29
PCAT1-202ENST00000561978 ARHGEF5Q12774 1597 aa16.88■□□□□ 0.29
PCAT1-202ENST00000561978 ABCA6Q8N139 1617 aa16.88■□□□□ 0.29
PCAT1-202ENST00000561978 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
PCAT1-202ENST00000561978 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
PCAT1-202ENST00000561978 RSPH4AQ5TD94 716 aa16.88■□□□□ 0.29
PCAT1-202ENST00000561978 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
PCAT1-202ENST00000561978 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms