RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 NCOA2Q15596 1464 aa21.91■■□□□ 1.1
IFT140-205ENST00000561954 CDC42BPAQ5VT25 1732 aa21.9■■□□□ 1.1
IFT140-205ENST00000561954 GPATCH8Q9UKJ3 1502 aaKnown RBP21.88■■□□□ 1.09
IFT140-205ENST00000561954 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
IFT140-205ENST00000561954 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
IFT140-205ENST00000561954 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
IFT140-205ENST00000561954 ADGRL1O94910 1474 aa21.86■■□□□ 1.09
IFT140-205ENST00000561954 KANK4Q5T7N3 995 aaPredicted RBP21.83■■□□□ 1.09
IFT140-205ENST00000561954 DENND4BO75064 1496 aaPredicted RBP21.83■■□□□ 1.08
IFT140-205ENST00000561954 ABCC1P33527 1531 aa21.82■■□□□ 1.08
IFT140-205ENST00000561954 PLEKHH2Q8IVE3 1493 aa21.82■■□□□ 1.08
IFT140-205ENST00000561954 COL17A1Q9UMD9 1497 aaPredicted RBP21.81■■□□□ 1.08
IFT140-205ENST00000561954 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
IFT140-205ENST00000561954 POGZQ7Z3K3 1410 aa21.8■■□□□ 1.08
IFT140-205ENST00000561954 FRMPD1Q5SYB0 1578 aa21.78■■□□□ 1.08
IFT140-205ENST00000561954 SAMD9LQ8IVG5 1584 aa21.78■■□□□ 1.08
IFT140-205ENST00000561954 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
IFT140-205ENST00000561954 SCAPERQ9BY12 1400 aa21.78■■□□□ 1.08
IFT140-205ENST00000561954 ZNF518AQ6AHZ1 1483 aa21.77■■□□□ 1.08
IFT140-205ENST00000561954 RICTORQ6R327 1708 aa21.77■■□□□ 1.08
IFT140-205ENST00000561954 ZMYM4Q5VZL5 1548 aa21.76■■□□□ 1.07
IFT140-205ENST00000561954 MIA2Q96PC5 1412 aa21.75■■□□□ 1.07
IFT140-205ENST00000561954 KIAA1107Q9UPP5 1409 aa21.74■■□□□ 1.07
IFT140-205ENST00000561954 SYCP2Q9BX26 1530 aa21.74■■□□□ 1.07
IFT140-205ENST00000561954 CAMSAP2Q08AD1 1489 aa21.72■■□□□ 1.07
IFT140-205ENST00000561954 KDM5CP41229 1560 aa21.72■■□□□ 1.07
IFT140-205ENST00000561954 ZNF777Q9ULD5 760 aaPredicted RBP21.71■■□□□ 1.07
IFT140-205ENST00000561954 MAGI2Q86UL8 1455 aa21.71■■□□□ 1.07
IFT140-205ENST00000561954 RAPGEF3O95398 923 aa21.69■■□□□ 1.06
IFT140-205ENST00000561954 ARHGEF40Q8TER5 1519 aa21.69■■□□□ 1.06
IFT140-205ENST00000561954 HECW2Q9P2P5 1572 aa21.67■■□□□ 1.06
IFT140-205ENST00000561954 ARHGEF12Q9NZN5 1544 aa21.67■■□□□ 1.06
IFT140-205ENST00000561954 FGD6Q6ZV73 1430 aa21.67■■□□□ 1.06
IFT140-205ENST00000561954 ZFYVE16Q7Z3T8 1539 aa21.66■■□□□ 1.06
IFT140-205ENST00000561954 ARHGEF5Q12774 1597 aa21.64■■□□□ 1.05
IFT140-205ENST00000561954 CCDC141Q6ZP82 1450 aa21.64■■□□□ 1.05
IFT140-205ENST00000561954 TRAPPC8Q9Y2L5 1435 aa21.63■■□□□ 1.05
IFT140-205ENST00000561954 PTPN23Q9H3S7 1636 aa21.63■■□□□ 1.05
IFT140-205ENST00000561954 TCOF1Q13428 1488 aaKnown RBP21.62■■□□□ 1.05
IFT140-205ENST00000561954 MBD5Q9P267 1494 aa21.62■■□□□ 1.05
IFT140-205ENST00000561954 MLH3Q9UHC1 1453 aa21.62■■□□□ 1.05
IFT140-205ENST00000561954 ZNF644Q9H582 1327 aaPredicted RBP21.6■■□□□ 1.05
IFT140-205ENST00000561954 INO80Q9ULG1 1556 aaPredicted RBP21.59■■□□□ 1.05
IFT140-205ENST00000561954 HNRNPMP52272 730 aaKnown RBP eCLIP21.58■■□□□ 1.05
IFT140-205ENST00000561954 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.05
IFT140-205ENST00000561954 AFAP1Q8N556 730 aa21.58■■□□□ 1.05
IFT140-205ENST00000561954 ATP7AQ04656 1500 aa21.57■■□□□ 1.04
IFT140-205ENST00000561954 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
IFT140-205ENST00000561954 YEATS2Q9ULM3 1422 aa21.55■■□□□ 1.04
IFT140-205ENST00000561954 DIP2CQ9Y2E4 1556 aa21.55■■□□□ 1.04
IFT140-205ENST00000561954 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
IFT140-205ENST00000561954 ABCA6Q8N139 1617 aa21.54■■□□□ 1.04
IFT140-205ENST00000561954 RTEL1-TNFRSF6BF6WH68 1400 aa21.54■■□□□ 1.04
IFT140-205ENST00000561954 C9orf84Q5VXU9 1444 aa21.54■■□□□ 1.04
IFT140-205ENST00000561954 REREQ9P2R6 1566 aa21.53■■□□□ 1.04
IFT140-205ENST00000561954 MYT1LQ9UL68 1186 aa21.53■■□□□ 1.04
IFT140-205ENST00000561954 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
IFT140-205ENST00000561954 DNMT1P26358 1616 aaKnown RBP21.52■■□□□ 1.04
IFT140-205ENST00000561954 KIDINS220Q9ULH0 1771 aa21.52■■□□□ 1.04
IFT140-205ENST00000561954 CROCC2H7BZ55 1655 aa21.52■■□□□ 1.04
IFT140-205ENST00000561954 ATP10AO60312 1499 aa21.52■■□□□ 1.03
IFT140-205ENST00000561954 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
IFT140-205ENST00000561954 DAPK1P53355 1430 aa21.48■■□□□ 1.03
IFT140-205ENST00000561954 TSPY4P0CV99 314 aa21.48■■□□□ 1.03
IFT140-205ENST00000561954 TSPY10P0CW01 314 aa21.48■■□□□ 1.03
IFT140-205ENST00000561954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.03
IFT140-205ENST00000561954 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
IFT140-205ENST00000561954 PLXNC1O60486 1568 aa21.46■■□□□ 1.03
IFT140-205ENST00000561954 ADGBQ8N7X0 1667 aa21.46■■□□□ 1.03
IFT140-205ENST00000561954 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
IFT140-205ENST00000561954 ABCC5O15440 1437 aa21.45■■□□□ 1.02
IFT140-205ENST00000561954 AGLP35573 1532 aa21.43■■□□□ 1.02
IFT140-205ENST00000561954 A2MP01023 1474 aa21.42■■□□□ 1.02
IFT140-205ENST00000561954 ARID4BQ4LE39 1312 aaPredicted RBP21.4■■□□□ 1.02
IFT140-205ENST00000561954 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
IFT140-205ENST00000561954 ADGRL2O95490 1459 aa21.38■■□□□ 1.01
IFT140-205ENST00000561954 SIGLEC1Q9BZZ2 1709 aa21.38■■□□□ 1.01
IFT140-205ENST00000561954 ANKRD30AQ9BXX3 1397 aa21.36■■□□□ 1.01
IFT140-205ENST00000561954 DUOX2Q9NRD8 1548 aa21.35■■□□□ 1.01
IFT140-205ENST00000561954 DHX29Q7Z478 1369 aaKnown RBP21.34■■□□□ 1.01
IFT140-205ENST00000561954 KIF15Q9NS87 1388 aa21.34■■□□□ 1.01
IFT140-205ENST00000561954 EIF2AK4Q9P2K8 1649 aaKnown RBP21.33■■□□□ 1.01
IFT140-205ENST00000561954 ADAMTSL3P82987 1691 aa21.31■■□□□ 1
IFT140-205ENST00000561954 ERBINQ96RT1 1412 aa21.31■■□□□ 1
IFT140-205ENST00000561954 ROCK1Q13464 1354 aa21.3■■□□□ 1
IFT140-205ENST00000561954 NCOA1Q15788 1441 aa21.29■■□□□ 1
IFT140-205ENST00000561954 MADDQ8WXG6 1647 aa21.29■■□□□ 1
IFT140-205ENST00000561954 FAM135AQ9P2D6 1515 aa21.28■■□□□ 1
IFT140-205ENST00000561954 FER1L4A9Z1Z3 1794 aa21.26■□□□□ 0.99
IFT140-205ENST00000561954 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
IFT140-205ENST00000561954 RNF17Q9BXT8 1623 aaKnown RBP21.26■□□□□ 0.99
IFT140-205ENST00000561954 CHIC2Q9UKJ5 165 aa21.25■□□□□ 0.99
IFT140-205ENST00000561954 CNTLNQ9NXG0 1405 aa21.24■□□□□ 0.99
IFT140-205ENST00000561954 KDM4FA0A1W2PPD8 638 aa21.24■□□□□ 0.99
IFT140-205ENST00000561954 MLECQ14165 292 aa21.23■□□□□ 0.99
IFT140-205ENST00000561954 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
IFT140-205ENST00000561954 ITGAEP38570 1179 aa21.22■□□□□ 0.99
IFT140-205ENST00000561954 RIMS1Q86UR5 1692 aaKnown RBP21.21■□□□□ 0.99
IFT140-205ENST00000561954 KIF3BO15066 747 aa21.2■□□□□ 0.98
IFT140-205ENST00000561954 ANKRD50Q9ULJ7 1429 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms