RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 POGZQ7Z3K3 1410 aa38.09■■■■□ 3.69
CDR2-202ENST00000561630 ZMYM4Q5VZL5 1548 aa38.07■■■■□ 3.68
CDR2-202ENST00000561630 MAGI2Q86UL8 1455 aa38.03■■■■□ 3.68
CDR2-202ENST00000561630 MTUS2Q5JR59 1369 aa38.02■■■■□ 3.68
CDR2-202ENST00000561630 ARHGEF40Q8TER5 1519 aa38.02■■■■□ 3.68
CDR2-202ENST00000561630 PREX2Q70Z35 1606 aa38.01■■■■□ 3.67
CDR2-202ENST00000561630 CDC42BPBQ9Y5S2 1711 aa37.99■■■■□ 3.67
CDR2-202ENST00000561630 ZFYVE16Q7Z3T8 1539 aa37.96■■■■□ 3.67
CDR2-202ENST00000561630 VPS8Q8N3P4 1428 aa37.95■■■■□ 3.67
CDR2-202ENST00000561630 YEATS2Q9ULM3 1422 aa37.95■■■■□ 3.67
CDR2-202ENST00000561630 GPATCH8Q9UKJ3 1502 aaKnown RBP37.94■■■■□ 3.66
CDR2-202ENST00000561630 ZNF518AQ6AHZ1 1483 aa37.94■■■■□ 3.66
CDR2-202ENST00000561630 AFAP1Q8N556 730 aa37.92■■■■□ 3.66
CDR2-202ENST00000561630 ARID4BQ4LE39 1312 aaPredicted RBP37.91■■■■□ 3.66
CDR2-202ENST00000561630 CDC42BPAQ5VT25 1732 aa37.91■■■■□ 3.66
CDR2-202ENST00000561630 EHBP1L1Q8N3D4 1523 aa37.89■■■■□ 3.66
CDR2-202ENST00000561630 CCNB3Q8WWL7 1395 aa37.88■■■■□ 3.65
CDR2-202ENST00000561630 ABCC1P33527 1531 aa37.87■■■■□ 3.65
CDR2-202ENST00000561630 ARHGEF12Q9NZN5 1544 aa37.86■■■■□ 3.65
CDR2-202ENST00000561630 KDM5CP41229 1560 aa37.85■■■■□ 3.65
CDR2-202ENST00000561630 CFDP1Q9UEE9 299 aaPredicted RBP37.83■■■■□ 3.65
CDR2-202ENST00000561630 ZNF777Q9ULD5 760 aaPredicted RBP37.83■■■■□ 3.65
CDR2-202ENST00000561630 TRAPPC8Q9Y2L5 1435 aa37.82■■■■□ 3.64
CDR2-202ENST00000561630 ADAMTSL3P82987 1691 aa37.8■■■■□ 3.64
CDR2-202ENST00000561630 ATP10AO60312 1499 aa37.8■■■■□ 3.64
CDR2-202ENST00000561630 TIAM1Q13009 1591 aa37.79■■■■□ 3.64
CDR2-202ENST00000561630 BCORL1Q5H9F3 1711 aa37.78■■■■□ 3.64
CDR2-202ENST00000561630 MLH3Q9UHC1 1453 aa37.77■■■■□ 3.64
CDR2-202ENST00000561630 SAMD9LQ8IVG5 1584 aa37.76■■■■□ 3.64
CDR2-202ENST00000561630 C9orf84Q5VXU9 1444 aa37.75■■■■□ 3.63
CDR2-202ENST00000561630 ITSN2Q9NZM3 1697 aa37.75■■■■□ 3.63
CDR2-202ENST00000561630 KIAA1107Q9UPP5 1409 aa37.73■■■■□ 3.63
CDR2-202ENST00000561630 HECW2Q9P2P5 1572 aa37.72■■■■□ 3.63
CDR2-202ENST00000561630 MYT1LQ9UL68 1186 aa37.72■■■■□ 3.63
CDR2-202ENST00000561630 PLEKHH2Q8IVE3 1493 aa37.71■■■■□ 3.63
CDR2-202ENST00000561630 SIGLEC1Q9BZZ2 1709 aa37.71■■■■□ 3.63
CDR2-202ENST00000561630 HNRNPMP52272 730 aaKnown RBP eCLIP37.69■■■■□ 3.62
CDR2-202ENST00000561630 SYCP2Q9BX26 1530 aa37.69■■■■□ 3.62
CDR2-202ENST00000561630 PTPRMP28827 1452 aa37.69■■■■□ 3.62
CDR2-202ENST00000561630 NCOA2Q15596 1464 aa37.69■■■■□ 3.62
CDR2-202ENST00000561630 MAP3K1Q13233 1512 aa37.68■■■■□ 3.62
CDR2-202ENST00000561630 LRRC9Q6ZRR7 1453 aa37.67■■■■□ 3.62
CDR2-202ENST00000561630 MADDQ8WXG6 1647 aa37.66■■■■□ 3.62
CDR2-202ENST00000561630 DIP2CQ9Y2E4 1556 aa37.64■■■■□ 3.62
CDR2-202ENST00000561630 SUPT6HQ7KZ85 1726 aaKnown RBP37.64■■■■□ 3.62
CDR2-202ENST00000561630 ZNF644Q9H582 1327 aaPredicted RBP37.62■■■■□ 3.61
CDR2-202ENST00000561630 MLECQ14165 292 aa37.61■■■■□ 3.61
CDR2-202ENST00000561630 ABCA6Q8N139 1617 aa37.59■■■■□ 3.61
CDR2-202ENST00000561630 KANK4Q5T7N3 995 aaPredicted RBP37.59■■■■□ 3.61
CDR2-202ENST00000561630 REREQ9P2R6 1566 aa37.59■■■■□ 3.61
CDR2-202ENST00000561630 SPAG9O60271 1321 aaKnown RBP37.59■■■■□ 3.61
CDR2-202ENST00000561630 KIDINS220Q9ULH0 1771 aa37.55■■■■□ 3.6
CDR2-202ENST00000561630 MBD5Q9P267 1494 aa37.53■■■■□ 3.6
CDR2-202ENST00000561630 RIMS1Q86UR5 1692 aaKnown RBP37.5■■■■□ 3.59
CDR2-202ENST00000561630 APLP2Q06481 763 aa37.49■■■■□ 3.59
CDR2-202ENST00000561630 AGLP35573 1532 aa37.48■■■■□ 3.59
CDR2-202ENST00000561630 ATP7AQ04656 1500 aa37.46■■■■□ 3.59
CDR2-202ENST00000561630 CAMSAP2Q08AD1 1489 aa37.45■■■■□ 3.59
CDR2-202ENST00000561630 INO80Q9ULG1 1556 aaPredicted RBP37.44■■■■□ 3.58
CDR2-202ENST00000561630 FER1L4A9Z1Z3 1794 aa37.4■■■■□ 3.58
CDR2-202ENST00000561630 RSPH4AQ5TD94 716 aa37.39■■■■□ 3.58
CDR2-202ENST00000561630 RTEL1-TNFRSF6BF6WH68 1400 aa37.37■■■■□ 3.57
CDR2-202ENST00000561630 CCDC141Q6ZP82 1450 aa37.36■■■■□ 3.57
CDR2-202ENST00000561630 MYOM3Q5VTT5 1437 aa37.36■■■■□ 3.57
CDR2-202ENST00000561630 PLPPR3Q6T4P5 718 aa37.34■■■■□ 3.57
CDR2-202ENST00000561630 MIA2Q96PC5 1412 aa37.34■■■■□ 3.57
CDR2-202ENST00000561630 A2MP01023 1474 aa37.33■■■■□ 3.57
CDR2-202ENST00000561630 PLXNC1O60486 1568 aa37.29■■■■□ 3.56
CDR2-202ENST00000561630 ARHGEF5Q12774 1597 aa37.29■■■■□ 3.56
CDR2-202ENST00000561630 ESF1Q9H501 851 aaKnown RBP37.26■■■■□ 3.56
CDR2-202ENST00000561630 CEBPAP49715 358 aaPredicted RBP37.25■■■■□ 3.55
CDR2-202ENST00000561630 LMTK3Q96Q04 1460 aa37.24■■■■□ 3.55
CDR2-202ENST00000561630 TSPY4P0CV99 314 aa37.23■■■■□ 3.55
CDR2-202ENST00000561630 TSPY10P0CW01 314 aa37.23■■■■□ 3.55
CDR2-202ENST00000561630 ADGBQ8N7X0 1667 aa37.21■■■■□ 3.55
CDR2-202ENST00000561630 DHX29Q7Z478 1369 aaKnown RBP37.2■■■■□ 3.55
CDR2-202ENST00000561630 CNTLNQ9NXG0 1405 aa37.19■■■■□ 3.54
CDR2-202ENST00000561630 GGT6Q6P531 493 aa37.12■■■■□ 3.53
CDR2-202ENST00000561630 FGD6Q6ZV73 1430 aa37.1■■■■□ 3.53
CDR2-202ENST00000561630 PPP6R1Q9UPN7 881 aa37.1■■■■□ 3.53
CDR2-202ENST00000561630 MAST1Q9Y2H9 1570 aa37.08■■■■□ 3.53
CDR2-202ENST00000561630 C3P01024 1663 aa37.06■■■■□ 3.52
CDR2-202ENST00000561630 HSPA2P54652 639 aa37.06■■■■□ 3.52
CDR2-202ENST00000561630 PTPN23Q9H3S7 1636 aa37.06■■■■□ 3.52
CDR2-202ENST00000561630 ZMYM3Q14202 1370 aa37.05■■■■□ 3.52
CDR2-202ENST00000561630 KIF3BO15066 747 aa37.04■■■■□ 3.52
CDR2-202ENST00000561630 TCOF1Q13428 1488 aaKnown RBP37.03■■■■□ 3.52
CDR2-202ENST00000561630 MROH2AA6NES4 1674 aa37.01■■■■□ 3.52
CDR2-202ENST00000561630 ABCC5O15440 1437 aa37.01■■■■□ 3.51
CDR2-202ENST00000561630 PREX1Q8TCU6 1659 aa36.99■■■■□ 3.51
CDR2-202ENST00000561630 UHRF1BP1Q6BDS2 1440 aa36.99■■■■□ 3.51
CDR2-202ENST00000561630 SHANK2Q9UPX8 1470 aa36.96■■■■□ 3.51
CDR2-202ENST00000561630 NPATQ14207 1427 aa36.96■■■■□ 3.51
CDR2-202ENST00000561630 CLTCQ00610 1675 aaKnown RBP36.95■■■■□ 3.51
CDR2-202ENST00000561630 SETD1BQ9UPS6 1966 aaKnown RBP36.94■■■■□ 3.5
CDR2-202ENST00000561630 DAPK1P53355 1430 aa36.93■■■■□ 3.5
CDR2-202ENST00000561630 DNMT1P26358 1616 aaKnown RBP36.89■■■■□ 3.5
CDR2-202ENST00000561630 FAM135AQ9P2D6 1515 aa36.89■■■■□ 3.5
CDR2-202ENST00000561630 PTPRKQ15262 1439 aa36.87■■■■□ 3.49
CDR2-202ENST00000561630 CROCC2H7BZ55 1655 aa36.86■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms