RNA–Protein interactions for RNA: ENST00000561397.1

AP4E1-206, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 1,233 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-206ENST00000561397 POTEMA6NI47 508 aa11.95□□□□□ -0.5
AP4E1-206ENST00000561397 G3V3G9 751 aa11.95□□□□□ -0.5
AP4E1-206ENST00000561397 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
AP4E1-206ENST00000561397 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
AP4E1-206ENST00000561397 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
AP4E1-206ENST00000561397 ST18O60284 1047 aa11.88□□□□□ -0.51
AP4E1-206ENST00000561397 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
AP4E1-206ENST00000561397 PPP1R37O75864 691 aa11.87□□□□□ -0.51
AP4E1-206ENST00000561397 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
AP4E1-206ENST00000561397 KDM2AQ9Y2K7 1162 aa11.85□□□□□ -0.51
AP4E1-206ENST00000561397 SNPHO15079 494 aa11.82□□□□□ -0.52
AP4E1-206ENST00000561397 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
AP4E1-206ENST00000561397 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
AP4E1-206ENST00000561397 KIF3CO14782 793 aa11.75□□□□□ -0.53
AP4E1-206ENST00000561397 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
AP4E1-206ENST00000561397 C2orf72A6NCS6 295 aa11.7□□□□□ -0.54
AP4E1-206ENST00000561397 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
AP4E1-206ENST00000561397 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
AP4E1-206ENST00000561397 POTEB3A0JP26 581 aa11.65□□□□□ -0.54
AP4E1-206ENST00000561397 POTEBQ6S5H4 581 aa11.65□□□□□ -0.54
AP4E1-206ENST00000561397 CADPS2Q86UW7 1296 aa11.65□□□□□ -0.54
AP4E1-206ENST00000561397 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
AP4E1-206ENST00000561397 CDAN1Q8IWY9 1227 aa11.64□□□□□ -0.55
AP4E1-206ENST00000561397 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
AP4E1-206ENST00000561397 EMP3P54852 163 aa11.62□□□□□ -0.55
AP4E1-206ENST00000561397 GPR153Q6NV75 609 aa11.62□□□□□ -0.55
AP4E1-206ENST00000561397 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
AP4E1-206ENST00000561397 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
AP4E1-206ENST00000561397 FAM205CA6NFA0 338 aa11.57□□□□□ -0.56
AP4E1-206ENST00000561397 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
AP4E1-206ENST00000561397 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
AP4E1-206ENST00000561397 ARSIQ5FYB1 569 aa11.56□□□□□ -0.56
AP4E1-206ENST00000561397 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
AP4E1-206ENST00000561397 HS3ST6Q96QI5 342 aa11.56□□□□□ -0.56
AP4E1-206ENST00000561397 SLC34A2O95436 690 aa11.54□□□□□ -0.56
AP4E1-206ENST00000561397 FOXK1P85037 733 aa11.54□□□□□ -0.56
AP4E1-206ENST00000561397 DSG2Q14126 1118 aa11.53□□□□□ -0.56
AP4E1-206ENST00000561397 CRISPLD2Q9H0B8 497 aa11.53□□□□□ -0.56
AP4E1-206ENST00000561397 NCKAP5LQ9HCH0 1330 aa11.52□□□□□ -0.57
AP4E1-206ENST00000561397 BCANQ96GW7 911 aa11.51□□□□□ -0.57
AP4E1-206ENST00000561397 PLPP6Q8IY26 295 aa11.5□□□□□ -0.57
AP4E1-206ENST00000561397 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
AP4E1-206ENST00000561397 ERBB3P21860 1342 aa11.48□□□□□ -0.57
AP4E1-206ENST00000561397 KRTAP3-3Q9BYR6 98 aa11.47□□□□□ -0.57
AP4E1-206ENST00000561397 KRTAP3-2Q9BYR7 98 aa11.47□□□□□ -0.57
AP4E1-206ENST00000561397 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.57
AP4E1-206ENST00000561397 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
AP4E1-206ENST00000561397 NUDT7P0C024 238 aa11.44□□□□□ -0.58
AP4E1-206ENST00000561397 MFSD10Q14728 455 aa11.44□□□□□ -0.58
AP4E1-206ENST00000561397 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
AP4E1-206ENST00000561397 PDE4AP27815 886 aa11.42□□□□□ -0.58
AP4E1-206ENST00000561397 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
AP4E1-206ENST00000561397 PPP1R15BQ5SWA1 713 aa11.41□□□□□ -0.58
AP4E1-206ENST00000561397 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
AP4E1-206ENST00000561397 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
AP4E1-206ENST00000561397 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
AP4E1-206ENST00000561397 P3H3Q8IVL6 736 aa11.38□□□□□ -0.59
AP4E1-206ENST00000561397 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
AP4E1-206ENST00000561397 LHX6Q9UPM6 363 aa11.38□□□□□ -0.59
AP4E1-206ENST00000561397 OXER1Q8TDS5 423 aa11.37□□□□□ -0.59
AP4E1-206ENST00000561397 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
AP4E1-206ENST00000561397 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
AP4E1-206ENST00000561397 E2F4Q16254 413 aa11.34□□□□□ -0.59
AP4E1-206ENST00000561397 CAMK2BQ13554 666 aa11.33□□□□□ -0.6
AP4E1-206ENST00000561397 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.6
AP4E1-206ENST00000561397 NBR1Q14596 966 aa11.31□□□□□ -0.6
AP4E1-206ENST00000561397 POTEEQ6S8J3 1075 aa11.31□□□□□ -0.6
AP4E1-206ENST00000561397 ARHGEF1Q92888 912 aaKnown RBP11.3□□□□□ -0.6
AP4E1-206ENST00000561397 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
AP4E1-206ENST00000561397 TBC1D12O60347 775 aa11.29□□□□□ -0.6
AP4E1-206ENST00000561397 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
AP4E1-206ENST00000561397 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
AP4E1-206ENST00000561397 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
AP4E1-206ENST00000561397 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
AP4E1-206ENST00000561397 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
AP4E1-206ENST00000561397 EVI5O60447 810 aa11.2□□□□□ -0.62
AP4E1-206ENST00000561397 PBX2P40425 430 aa11.18□□□□□ -0.62
AP4E1-206ENST00000561397 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
AP4E1-206ENST00000561397 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.62
AP4E1-206ENST00000561397 ANKRD13DQ6ZTN6 518 aa11.17□□□□□ -0.62
AP4E1-206ENST00000561397 FOSBP53539 338 aa11.16□□□□□ -0.62
AP4E1-206ENST00000561397 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
AP4E1-206ENST00000561397 ARHGAP33O14559 1287 aa11.15□□□□□ -0.62
AP4E1-206ENST00000561397 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
AP4E1-206ENST00000561397 PSEN2P49810 448 aa11.14□□□□□ -0.63
AP4E1-206ENST00000561397 ZNF454Q8N9F8 522 aa11.14□□□□□ -0.63
AP4E1-206ENST00000561397 DPYSL4O14531 572 aa11.13□□□□□ -0.63
AP4E1-206ENST00000561397 SEMA3EO15041 775 aa11.13□□□□□ -0.63
AP4E1-206ENST00000561397 DMRTA1Q5VZB9 504 aa11.13□□□□□ -0.63
AP4E1-206ENST00000561397 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
AP4E1-206ENST00000561397 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
AP4E1-206ENST00000561397 PDIA6Q15084 440 aa11.1□□□□□ -0.63
AP4E1-206ENST00000561397 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
AP4E1-206ENST00000561397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
AP4E1-206ENST00000561397 BCL2L12Q9HB09 334 aa11.08□□□□□ -0.64
AP4E1-206ENST00000561397 PCDHGA10Q9Y5H3 936 aa11.08□□□□□ -0.64
AP4E1-206ENST00000561397 KCNK17Q96T54 332 aa11.07□□□□□ -0.64
AP4E1-206ENST00000561397 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
AP4E1-206ENST00000561397 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
AP4E1-206ENST00000561397 SPDYE16A6NNV3 312 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms