RNA–Protein interactions for RNA: ENST00000561379.1

IPO4-219, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-219ENST00000561379 MAGI2Q86UL8 1455 aa24.5■■□□□ 1.51
IPO4-219ENST00000561379 PCF11O94913 1555 aaKnown RBP24.5■■□□□ 1.51
IPO4-219ENST00000561379 CDK11AQ9UQ88 783 aaPredicted RBP24.49■■□□□ 1.51
IPO4-219ENST00000561379 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
IPO4-219ENST00000561379 PLPPR3Q6T4P5 718 aa24.47■■□□□ 1.51
IPO4-219ENST00000561379 LMTK3Q96Q04 1460 aa24.45■■□□□ 1.51
IPO4-219ENST00000561379 EFCAB2Q5VUJ9 269 aa24.45■■□□□ 1.5
IPO4-219ENST00000561379 KIF14Q15058 1648 aa24.45■■□□□ 1.5
IPO4-219ENST00000561379 MLECQ14165 292 aa24.44■■□□□ 1.5
IPO4-219ENST00000561379 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
IPO4-219ENST00000561379 FER1L4A9Z1Z3 1794 aa24.41■■□□□ 1.5
IPO4-219ENST00000561379 CLIP1P30622 1438 aa24.4■■□□□ 1.5
IPO4-219ENST00000561379 LRRIQ1Q96JM4 1722 aa24.4■■□□□ 1.5
IPO4-219ENST00000561379 ARHGAP5Q13017 1502 aa24.39■■□□□ 1.49
IPO4-219ENST00000561379 ATP10AO60312 1499 aa24.38■■□□□ 1.49
IPO4-219ENST00000561379 FBXO41Q8TF61 875 aa24.37■■□□□ 1.49
IPO4-219ENST00000561379 C9orf84Q5VXU9 1444 aa24.36■■□□□ 1.49
IPO4-219ENST00000561379 HSPA2P54652 639 aa24.35■■□□□ 1.49
IPO4-219ENST00000561379 ZNF518AQ6AHZ1 1483 aa24.33■■□□□ 1.49
IPO4-219ENST00000561379 MYT1LQ9UL68 1186 aa24.32■■□□□ 1.48
IPO4-219ENST00000561379 ARHGEF12Q9NZN5 1544 aa24.3■■□□□ 1.48
IPO4-219ENST00000561379 CDC42BPBQ9Y5S2 1711 aa24.3■■□□□ 1.48
IPO4-219ENST00000561379 AFAP1Q8N556 730 aa24.3■■□□□ 1.48
IPO4-219ENST00000561379 KDM5CP41229 1560 aa24.29■■□□□ 1.48
IPO4-219ENST00000561379 CASKIN1Q8WXD9 1431 aa24.28■■□□□ 1.48
IPO4-219ENST00000561379 CCDC18Q5T9S5 1454 aa24.28■■□□□ 1.48
IPO4-219ENST00000561379 PREX2Q70Z35 1606 aa24.26■■□□□ 1.47
IPO4-219ENST00000561379 DIP2CQ9Y2E4 1556 aa24.24■■□□□ 1.47
IPO4-219ENST00000561379 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
IPO4-219ENST00000561379 CEBPAP49715 358 aaPredicted RBP24.21■■□□□ 1.47
IPO4-219ENST00000561379 ABCA6Q8N139 1617 aa24.21■■□□□ 1.47
IPO4-219ENST00000561379 ABCC1P33527 1531 aa24.2■■□□□ 1.47
IPO4-219ENST00000561379 ITSN2Q9NZM3 1697 aa24.2■■□□□ 1.46
IPO4-219ENST00000561379 MLH3Q9UHC1 1453 aa24.19■■□□□ 1.46
IPO4-219ENST00000561379 FYCO1Q9BQS8 1478 aa24.19■■□□□ 1.46
IPO4-219ENST00000561379 TRAPPC8Q9Y2L5 1435 aa24.18■■□□□ 1.46
IPO4-219ENST00000561379 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
IPO4-219ENST00000561379 REREQ9P2R6 1566 aa24.18■■□□□ 1.46
IPO4-219ENST00000561379 ZNF777Q9ULD5 760 aaPredicted RBP24.12■■□□□ 1.45
IPO4-219ENST00000561379 SETD1BQ9UPS6 1966 aaKnown RBP24.12■■□□□ 1.45
IPO4-219ENST00000561379 KIDINS220Q9ULH0 1771 aa24.11■■□□□ 1.45
IPO4-219ENST00000561379 AGLP35573 1532 aa24.11■■□□□ 1.45
IPO4-219ENST00000561379 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
IPO4-219ENST00000561379 UHRF1BP1Q6BDS2 1440 aa24.1■■□□□ 1.45
IPO4-219ENST00000561379 C3P01024 1663 aa24.09■■□□□ 1.45
IPO4-219ENST00000561379 CERKQ8TCT0 537 aa24.08■■□□□ 1.45
IPO4-219ENST00000561379 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.44
IPO4-219ENST00000561379 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
IPO4-219ENST00000561379 GPATCH8Q9UKJ3 1502 aaKnown RBP24.05■■□□□ 1.44
IPO4-219ENST00000561379 STRCQ7RTU9 1775 aa24.04■■□□□ 1.44
IPO4-219ENST00000561379 DMRT2Q9Y5R5 561 aa24.02■■□□□ 1.44
IPO4-219ENST00000561379 HNRNPMP52272 730 aaKnown RBP eCLIP24.01■■□□□ 1.43
IPO4-219ENST00000561379 SPAG9O60271 1321 aaKnown RBP24.01■■□□□ 1.43
IPO4-219ENST00000561379 CNTLNQ9NXG0 1405 aa24.01■■□□□ 1.43
IPO4-219ENST00000561379 CFDP1Q9UEE9 299 aaPredicted RBP23.99■■□□□ 1.43
IPO4-219ENST00000561379 CCNB3Q8WWL7 1395 aa23.99■■□□□ 1.43
IPO4-219ENST00000561379 MTUS2Q5JR59 1369 aa23.98■■□□□ 1.43
IPO4-219ENST00000561379 PLEKHH2Q8IVE3 1493 aa23.98■■□□□ 1.43
IPO4-219ENST00000561379 SUPT6HQ7KZ85 1726 aaKnown RBP23.98■■□□□ 1.43
IPO4-219ENST00000561379 ATP7AQ04656 1500 aa23.96■■□□□ 1.43
IPO4-219ENST00000561379 KIAA1107Q9UPP5 1409 aa23.95■■□□□ 1.42
IPO4-219ENST00000561379 MROH2AA6NES4 1674 aa23.94■■□□□ 1.42
IPO4-219ENST00000561379 INO80Q9ULG1 1556 aaPredicted RBP23.93■■□□□ 1.42
IPO4-219ENST00000561379 PTPRTO14522 1441 aa23.91■■□□□ 1.42
IPO4-219ENST00000561379 A2MP01023 1474 aa23.9■■□□□ 1.42
IPO4-219ENST00000561379 ZMYM3Q14202 1370 aa23.89■■□□□ 1.41
IPO4-219ENST00000561379 EHBP1L1Q8N3D4 1523 aa23.89■■□□□ 1.41
IPO4-219ENST00000561379 CLTCQ00610 1675 aaKnown RBP23.89■■□□□ 1.41
IPO4-219ENST00000561379 PLXNC1O60486 1568 aa23.88■■□□□ 1.41
IPO4-219ENST00000561379 TIAM1Q13009 1591 aa23.88■■□□□ 1.41
IPO4-219ENST00000561379 NPATQ14207 1427 aa23.88■■□□□ 1.41
IPO4-219ENST00000561379 NCOA1Q15788 1441 aa23.85■■□□□ 1.41
IPO4-219ENST00000561379 GGT6Q6P531 493 aa23.85■■□□□ 1.41
IPO4-219ENST00000561379 ADGBQ8N7X0 1667 aa23.85■■□□□ 1.41
IPO4-219ENST00000561379 ZNF644Q9H582 1327 aaPredicted RBP23.84■■□□□ 1.41
IPO4-219ENST00000561379 CAMSAP1Q5T5Y3 1602 aa23.83■■□□□ 1.41
IPO4-219ENST00000561379 CEP162Q5TB80 1403 aa23.83■■□□□ 1.4
IPO4-219ENST00000561379 MBD5Q9P267 1494 aa23.8■■□□□ 1.4
IPO4-219ENST00000561379 MYO3AQ8NEV4 1616 aa23.79■■□□□ 1.4
IPO4-219ENST00000561379 PTPRKQ15262 1439 aa23.77■■□□□ 1.4
IPO4-219ENST00000561379 LTBP4Q8N2S1 1624 aa23.77■■□□□ 1.4
IPO4-219ENST00000561379 ZNF142P52746 1687 aaPredicted RBP23.76■■□□□ 1.39
IPO4-219ENST00000561379 PPP6R1Q9UPN7 881 aa23.75■■□□□ 1.39
IPO4-219ENST00000561379 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
IPO4-219ENST00000561379 NCKAP5LQ9HCH0 1330 aa23.74■■□□□ 1.39
IPO4-219ENST00000561379 CEP170BQ9Y4F5 1589 aaPredicted RBP23.74■■□□□ 1.39
IPO4-219ENST00000561379 NCOA2Q15596 1464 aa23.73■■□□□ 1.39
IPO4-219ENST00000561379 CAMSAP2Q08AD1 1489 aa23.71■■□□□ 1.39
IPO4-219ENST00000561379 CCDC141Q6ZP82 1450 aa23.71■■□□□ 1.39
IPO4-219ENST00000561379 DHX29Q7Z478 1369 aaKnown RBP23.71■■□□□ 1.39
IPO4-219ENST00000561379 PLA2R1Q13018 1463 aa23.7■■□□□ 1.38
IPO4-219ENST00000561379 IQSEC2Q5JU85 1478 aa23.69■■□□□ 1.38
IPO4-219ENST00000561379 PKD2Q13563 968 aa23.68■■□□□ 1.38
IPO4-219ENST00000561379 KIF3BO15066 747 aa23.67■■□□□ 1.38
IPO4-219ENST00000561379 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
IPO4-219ENST00000561379 ZNF335Q9H4Z2 1342 aaPredicted RBP23.65■■□□□ 1.38
IPO4-219ENST00000561379 TCOF1Q13428 1488 aaKnown RBP23.65■■□□□ 1.38
IPO4-219ENST00000561379 DISP3Q9P2K9 1392 aa23.65■■□□□ 1.38
IPO4-219ENST00000561379 A2ML1A8K2U0 1454 aa23.64■■□□□ 1.38
IPO4-219ENST00000561379 KDM5DQ9BY66 1539 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms