RNA–Protein interactions for RNA: ENST00000561308.5

LINS1-214, Transcript of lines homolog 1, humanhuman

TSL 1 (best) BASIC

Gene LINS1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-214ENST00000561308 HS3ST6Q96QI5 342 aa13.02□□□□□ -0.32
LINS1-214ENST00000561308 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.33
LINS1-214ENST00000561308 POTEB3A0JP26 581 aa12.99□□□□□ -0.33
LINS1-214ENST00000561308 POTEBQ6S5H4 581 aa12.99□□□□□ -0.33
LINS1-214ENST00000561308 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
LINS1-214ENST00000561308 ERBB3P21860 1342 aa12.93□□□□□ -0.34
LINS1-214ENST00000561308 SPNS2Q8IVW8 549 aa12.91□□□□□ -0.34
LINS1-214ENST00000561308 HS6ST3Q8IZP7 471 aa12.9□□□□□ -0.34
LINS1-214ENST00000561308 GPR153Q6NV75 609 aa12.89□□□□□ -0.35
LINS1-214ENST00000561308 KRTAP3-3Q9BYR6 98 aa12.89□□□□□ -0.35
LINS1-214ENST00000561308 KRTAP3-2Q9BYR7 98 aa12.89□□□□□ -0.35
LINS1-214ENST00000561308 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
LINS1-214ENST00000561308 KIF3CO14782 793 aa12.88□□□□□ -0.35
LINS1-214ENST00000561308 PPP1R37O75864 691 aa12.87□□□□□ -0.35
LINS1-214ENST00000561308 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
LINS1-214ENST00000561308 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
LINS1-214ENST00000561308 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
LINS1-214ENST00000561308 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
LINS1-214ENST00000561308 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
LINS1-214ENST00000561308 KHSRPQ92945 711 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINS1-214ENST00000561308 ZNF687Q8N1G0 1237 aa12.75□□□□□ -0.37
LINS1-214ENST00000561308 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
LINS1-214ENST00000561308 SLC34A2O95436 690 aa12.73□□□□□ -0.37
LINS1-214ENST00000561308 DNAJC5Q9H3Z4 198 aa12.73□□□□□ -0.37
LINS1-214ENST00000561308 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
LINS1-214ENST00000561308 NUDT7P0C024 238 aa12.7□□□□□ -0.38
LINS1-214ENST00000561308 PCDHGA4Q9Y5G9 962 aa12.7□□□□□ -0.38
LINS1-214ENST00000561308 RYDENQ9NUL5 291 aaKnown RBP12.69□□□□□ -0.38
LINS1-214ENST00000561308 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
LINS1-214ENST00000561308 FOXK1P85037 733 aa12.65□□□□□ -0.38
LINS1-214ENST00000561308 PLPP6Q8IY26 295 aa12.64□□□□□ -0.39
LINS1-214ENST00000561308 LHX6Q9UPM6 363 aa12.63□□□□□ -0.39
LINS1-214ENST00000561308 DSG2Q14126 1118 aa12.61□□□□□ -0.39
LINS1-214ENST00000561308 PTCD2Q8WV60 388 aaKnown RBP12.6□□□□□ -0.39
LINS1-214ENST00000561308 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
LINS1-214ENST00000561308 NISCHQ9Y2I1 1504 aa12.58□□□□□ -0.4
LINS1-214ENST00000561308 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
LINS1-214ENST00000561308 PBX2P40425 430 aa12.55□□□□□ -0.4
LINS1-214ENST00000561308 LSM11P83369 360 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINS1-214ENST00000561308 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
LINS1-214ENST00000561308 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
LINS1-214ENST00000561308 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
LINS1-214ENST00000561308 KDM4FA0A1W2PPD8 638 aa12.53□□□□□ -0.4
LINS1-214ENST00000561308 PSDA5PKW4 1024 aaPredicted RBP12.53□□□□□ -0.4
LINS1-214ENST00000561308 TBC1D12O60347 775 aa12.53□□□□□ -0.4
LINS1-214ENST00000561308 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
LINS1-214ENST00000561308 PTGER2P43116 358 aa12.52□□□□□ -0.4
LINS1-214ENST00000561308 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
LINS1-214ENST00000561308 AXIN2Q9Y2T1 843 aa12.5□□□□□ -0.41
LINS1-214ENST00000561308 PDE4AP27815 886 aa12.48□□□□□ -0.41
LINS1-214ENST00000561308 PPP1R15BQ5SWA1 713 aa12.48□□□□□ -0.41
LINS1-214ENST00000561308 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
LINS1-214ENST00000561308 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
LINS1-214ENST00000561308 UPF1Q92900 1129 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINS1-214ENST00000561308 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
LINS1-214ENST00000561308 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
LINS1-214ENST00000561308 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
LINS1-214ENST00000561308 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
LINS1-214ENST00000561308 PSEN2P49810 448 aa12.37□□□□□ -0.43
LINS1-214ENST00000561308 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
LINS1-214ENST00000561308 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
LINS1-214ENST00000561308 MFSD10Q14728 455 aa12.34□□□□□ -0.43
LINS1-214ENST00000561308 TK2O00142 265 aa12.33□□□□□ -0.44
LINS1-214ENST00000561308 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
LINS1-214ENST00000561308 KCNH8Q96L42 1107 aa12.33□□□□□ -0.44
LINS1-214ENST00000561308 KCNK17Q96T54 332 aa12.31□□□□□ -0.44
LINS1-214ENST00000561308 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
LINS1-214ENST00000561308 EVI5O60447 810 aa12.29□□□□□ -0.44
LINS1-214ENST00000561308 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
LINS1-214ENST00000561308 FOSBP53539 338 aa12.28□□□□□ -0.44
LINS1-214ENST00000561308 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
LINS1-214ENST00000561308 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
LINS1-214ENST00000561308 HRO43593 1189 aa12.26□□□□□ -0.45
LINS1-214ENST00000561308 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
LINS1-214ENST00000561308 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
LINS1-214ENST00000561308 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
LINS1-214ENST00000561308 JPH4Q96JJ6 628 aa12.24□□□□□ -0.45
LINS1-214ENST00000561308 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
LINS1-214ENST00000561308 PTPREP23469 700 aa12.21□□□□□ -0.46
LINS1-214ENST00000561308 ZDHHC16Q969W1 377 aa12.21□□□□□ -0.46
LINS1-214ENST00000561308 HCSTQ9UBK5 93 aa12.21□□□□□ -0.46
LINS1-214ENST00000561308 VPS9D1Q9Y2B5 631 aa12.21□□□□□ -0.46
LINS1-214ENST00000561308 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
LINS1-214ENST00000561308 ADAM33Q9BZ11 813 aa12.18□□□□□ -0.46
LINS1-214ENST00000561308 CAMK2BQ13554 666 aa12.15□□□□□ -0.46
LINS1-214ENST00000561308 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
LINS1-214ENST00000561308 KCTD12Q96CX2 325 aaKnown RBP12.15□□□□□ -0.46
LINS1-214ENST00000561308 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
LINS1-214ENST00000561308 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.47
LINS1-214ENST00000561308 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
LINS1-214ENST00000561308 PCDHGA10Q9Y5H3 936 aa12.13□□□□□ -0.47
LINS1-214ENST00000561308 DPYSL4O14531 572 aa12.1□□□□□ -0.47
LINS1-214ENST00000561308 BHMG1C9JSJ3 638 aaPredicted RBP12.09□□□□□ -0.47
LINS1-214ENST00000561308 PHF14O94880 888 aa12.09□□□□□ -0.47
LINS1-214ENST00000561308 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
LINS1-214ENST00000561308 FBXW7Q969H0 707 aa12.09□□□□□ -0.47
LINS1-214ENST00000561308 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
LINS1-214ENST00000561308 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
LINS1-214ENST00000561308 GOLGA8CPA6NN73 597 aa12.05□□□□□ -0.48
LINS1-214ENST00000561308 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms