RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
USP8-216ENST00000561206 ARSIQ5FYB1 569 aa13.57□□□□□ -0.24
USP8-216ENST00000561206 LSM11P83369 360 aaKnown RBP eCLIP13.56□□□□□ -0.24
USP8-216ENST00000561206 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
USP8-216ENST00000561206 PBX2P40425 430 aa13.49□□□□□ -0.25
USP8-216ENST00000561206 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
USP8-216ENST00000561206 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP8-216ENST00000561206 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
USP8-216ENST00000561206 RNF25Q96BH1 459 aaPredicted RBP13.45□□□□□ -0.26
USP8-216ENST00000561206 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.43□□□□□ -0.26
USP8-216ENST00000561206 ZFP91Q96JP5 570 aaPredicted RBP13.43□□□□□ -0.26
USP8-216ENST00000561206 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
USP8-216ENST00000561206 KIF3CO14782 793 aa13.41□□□□□ -0.26
USP8-216ENST00000561206 POTEEQ6S8J3 1075 aa13.41□□□□□ -0.26
USP8-216ENST00000561206 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
USP8-216ENST00000561206 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
USP8-216ENST00000561206 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
USP8-216ENST00000561206 NLRP6P59044 892 aa13.38□□□□□ -0.27
USP8-216ENST00000561206 SLC34A2O95436 690 aa13.37□□□□□ -0.27
USP8-216ENST00000561206 NUDT7P0C024 238 aa13.33□□□□□ -0.28
USP8-216ENST00000561206 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
USP8-216ENST00000561206 C2orf72A6NCS6 295 aa13.3□□□□□ -0.28
USP8-216ENST00000561206 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
USP8-216ENST00000561206 PCDHGA4Q9Y5G9 962 aa13.28□□□□□ -0.28
USP8-216ENST00000561206 ADGRD1Q6QNK2 874 aa13.27□□□□□ -0.29
USP8-216ENST00000561206 ARHGAP33O14559 1287 aa13.24□□□□□ -0.29
USP8-216ENST00000561206 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
USP8-216ENST00000561206 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
USP8-216ENST00000561206 TK2O00142 265 aa13.23□□□□□ -0.29
USP8-216ENST00000561206 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
USP8-216ENST00000561206 HRO43593 1189 aa13.2□□□□□ -0.3
USP8-216ENST00000561206 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
USP8-216ENST00000561206 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
USP8-216ENST00000561206 TMC2Q8TDI7 906 aa13.11□□□□□ -0.31
USP8-216ENST00000561206 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
USP8-216ENST00000561206 RGS20O76081 388 aa13.1□□□□□ -0.31
USP8-216ENST00000561206 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
USP8-216ENST00000561206 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
USP8-216ENST00000561206 IFFO2Q5TF58 517 aa13.07□□□□□ -0.32
USP8-216ENST00000561206 PSEN2P49810 448 aa13.04□□□□□ -0.32
USP8-216ENST00000561206 KCTD12Q96CX2 325 aaKnown RBP13.02□□□□□ -0.33
USP8-216ENST00000561206 STK25O00506 426 aa13.01□□□□□ -0.33
USP8-216ENST00000561206 PPP4R3BQ5MIZ7 849 aa13□□□□□ -0.33
USP8-216ENST00000561206 FOXK1P85037 733 aa12.96□□□□□ -0.33
USP8-216ENST00000561206 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
USP8-216ENST00000561206 VPS9D1Q9Y2B5 631 aa12.93□□□□□ -0.34
USP8-216ENST00000561206 PPP1R37O75864 691 aa12.92□□□□□ -0.34
USP8-216ENST00000561206 SLC4A5Q9BY07 1137 aa12.92□□□□□ -0.34
USP8-216ENST00000561206 PLPP6Q8IY26 295 aa12.89□□□□□ -0.35
USP8-216ENST00000561206 IRX2Q9BZI1 471 aaPredicted RBP12.89□□□□□ -0.35
USP8-216ENST00000561206 A0A0G2JS52 829 aa12.88□□□□□ -0.35
USP8-216ENST00000561206 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
USP8-216ENST00000561206 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
USP8-216ENST00000561206 TBC1D12O60347 775 aa12.87□□□□□ -0.35
USP8-216ENST00000561206 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
USP8-216ENST00000561206 BHMG1C9JSJ3 638 aaPredicted RBP12.85□□□□□ -0.35
USP8-216ENST00000561206 PTPN5P54829 565 aa12.85□□□□□ -0.35
USP8-216ENST00000561206 THSD4Q6ZMP0 1018 aa12.84□□□□□ -0.35
USP8-216ENST00000561206 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
USP8-216ENST00000561206 DSG2Q14126 1118 aa12.81□□□□□ -0.36
USP8-216ENST00000561206 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
USP8-216ENST00000561206 OXER1Q8TDS5 423 aa12.77□□□□□ -0.37
USP8-216ENST00000561206 RGL2O15211 777 aa12.75□□□□□ -0.37
USP8-216ENST00000561206 ZBED2Q9BTP6 218 aa12.73□□□□□ -0.37
USP8-216ENST00000561206 ZNF454Q8N9F8 522 aa12.71□□□□□ -0.37
USP8-216ENST00000561206 WNT2BQ93097 391 aa12.71□□□□□ -0.37
USP8-216ENST00000561206 FOSBP53539 338 aa12.7□□□□□ -0.38
USP8-216ENST00000561206 PKD2Q13563 968 aa12.7□□□□□ -0.38
USP8-216ENST00000561206 PTPREP23469 700 aa12.69□□□□□ -0.38
USP8-216ENST00000561206 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
USP8-216ENST00000561206 MRPL50Q8N5N7 158 aaKnown RBP12.68□□□□□ -0.38
USP8-216ENST00000561206 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
USP8-216ENST00000561206 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
USP8-216ENST00000561206 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
USP8-216ENST00000561206 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
USP8-216ENST00000561206 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP8-216ENST00000561206 CRISPLD2Q9H0B8 497 aa12.6□□□□□ -0.39
USP8-216ENST00000561206 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
USP8-216ENST00000561206 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
USP8-216ENST00000561206 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
USP8-216ENST00000561206 Q6ZNB5 142 aa12.55□□□□□ -0.4
USP8-216ENST00000561206 PPP1R15BQ5SWA1 713 aa12.53□□□□□ -0.4
USP8-216ENST00000561206 NYAP1Q6ZVC0 841 aa12.53□□□□□ -0.4
USP8-216ENST00000561206 RABGEF1Q9UJ41 708 aa12.53□□□□□ -0.4
USP8-216ENST00000561206 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
USP8-216ENST00000561206 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
USP8-216ENST00000561206 EVI5O60447 810 aa12.49□□□□□ -0.41
USP8-216ENST00000561206 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
USP8-216ENST00000561206 LAPTM4BQ86VI4 370 aa12.49□□□□□ -0.41
USP8-216ENST00000561206 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
USP8-216ENST00000561206 SOWAHBA6NEL2 793 aa12.47□□□□□ -0.41
USP8-216ENST00000561206 LCE2BO14633 110 aa12.45□□□□□ -0.42
USP8-216ENST00000561206 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
USP8-216ENST00000561206 BCAMP50895 628 aa12.43□□□□□ -0.42
USP8-216ENST00000561206 KCNC4Q03721 635 aa12.43□□□□□ -0.42
USP8-216ENST00000561206 PROX2Q3B8N5 592 aa12.42□□□□□ -0.42
USP8-216ENST00000561206 RYDENQ9NUL5 291 aaKnown RBP12.42□□□□□ -0.42
USP8-216ENST00000561206 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
USP8-216ENST00000561206 COL9A1P20849 921 aa12.4□□□□□ -0.42
USP8-216ENST00000561206 PDE4AP27815 886 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms