RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 MYOM3Q5VTT5 1437 aa24.68■■□□□ 1.54
SHF-209ENST00000561091 ARAP3Q8WWN8 1544 aa24.67■■□□□ 1.54
SHF-209ENST00000561091 CFAP74Q9C0B2 1584 aa24.65■■□□□ 1.54
SHF-209ENST00000561091 FANCAO15360 1455 aa24.64■■□□□ 1.54
SHF-209ENST00000561091 TEX14Q8IWB6 1497 aa24.64■■□□□ 1.53
SHF-209ENST00000561091 CFDP1Q9UEE9 299 aaPredicted RBP24.63■■□□□ 1.53
SHF-209ENST00000561091 SAMD9LQ8IVG5 1584 aa24.62■■□□□ 1.53
SHF-209ENST00000561091 EFCAB2Q5VUJ9 269 aa24.6■■□□□ 1.53
SHF-209ENST00000561091 ZNF777Q9ULD5 760 aaPredicted RBP24.6■■□□□ 1.53
SHF-209ENST00000561091 FGD6Q6ZV73 1430 aa24.6■■□□□ 1.53
SHF-209ENST00000561091 PTPN23Q9H3S7 1636 aa24.59■■□□□ 1.53
SHF-209ENST00000561091 NEO1Q92859 1461 aa24.58■■□□□ 1.53
SHF-209ENST00000561091 AKNAQ7Z591 1439 aa24.57■■□□□ 1.52
SHF-209ENST00000561091 MIA2Q96PC5 1412 aa24.57■■□□□ 1.52
SHF-209ENST00000561091 ZNF644Q9H582 1327 aaPredicted RBP24.57■■□□□ 1.52
SHF-209ENST00000561091 CAMSAP2Q08AD1 1489 aa24.56■■□□□ 1.52
SHF-209ENST00000561091 ABCC1P33527 1531 aa24.55■■□□□ 1.52
SHF-209ENST00000561091 ADGRL1O94910 1474 aa24.53■■□□□ 1.52
SHF-209ENST00000561091 SYCP2Q9BX26 1530 aa24.51■■□□□ 1.51
SHF-209ENST00000561091 TCOF1Q13428 1488 aaKnown RBP24.51■■□□□ 1.51
SHF-209ENST00000561091 ARHGEF12Q9NZN5 1544 aa24.51■■□□□ 1.51
SHF-209ENST00000561091 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
SHF-209ENST00000561091 SCAPERQ9BY12 1400 aa24.49■■□□□ 1.51
SHF-209ENST00000561091 PLEKHH2Q8IVE3 1493 aa24.48■■□□□ 1.51
SHF-209ENST00000561091 RRBP1Q9P2E9 1410 aaKnown RBP24.48■■□□□ 1.51
SHF-209ENST00000561091 RICTORQ6R327 1708 aa24.47■■□□□ 1.51
SHF-209ENST00000561091 KDM6BO15054 1643 aa24.46■■□□□ 1.51
SHF-209ENST00000561091 COL17A1Q9UMD9 1497 aaPredicted RBP24.46■■□□□ 1.51
SHF-209ENST00000561091 HNRNPMP52272 730 aaKnown RBP eCLIP24.46■■□□□ 1.51
SHF-209ENST00000561091 FAM50AQ14320 339 aaKnown RBP24.46■■□□□ 1.51
SHF-209ENST00000561091 KIAA1107Q9UPP5 1409 aa24.44■■□□□ 1.5
SHF-209ENST00000561091 FRMPD1Q5SYB0 1578 aa24.44■■□□□ 1.5
SHF-209ENST00000561091 DENND4BO75064 1496 aaPredicted RBP24.44■■□□□ 1.5
SHF-209ENST00000561091 MBD5Q9P267 1494 aa24.43■■□□□ 1.5
SHF-209ENST00000561091 TRAPPC8Q9Y2L5 1435 aa24.43■■□□□ 1.5
SHF-209ENST00000561091 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
SHF-209ENST00000561091 DNMT1P26358 1616 aaKnown RBP24.41■■□□□ 1.5
SHF-209ENST00000561091 POGZQ7Z3K3 1410 aa24.41■■□□□ 1.5
SHF-209ENST00000561091 CROCC2H7BZ55 1655 aa24.4■■□□□ 1.5
SHF-209ENST00000561091 RAPGEF3O95398 923 aa24.4■■□□□ 1.5
SHF-209ENST00000561091 AFAP1Q8N556 730 aa24.37■■□□□ 1.49
SHF-209ENST00000561091 ZNF518AQ6AHZ1 1483 aa24.37■■□□□ 1.49
SHF-209ENST00000561091 CCDC141Q6ZP82 1450 aa24.37■■□□□ 1.49
SHF-209ENST00000561091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.36■■□□□ 1.49
SHF-209ENST00000561091 KDM5CP41229 1560 aa24.36■■□□□ 1.49
SHF-209ENST00000561091 ABCC5O15440 1437 aa24.35■■□□□ 1.49
SHF-209ENST00000561091 DAPK1P53355 1430 aa24.35■■□□□ 1.49
SHF-209ENST00000561091 ZMYM4Q5VZL5 1548 aa24.31■■□□□ 1.48
SHF-209ENST00000561091 ITGAEP38570 1179 aa24.31■■□□□ 1.48
SHF-209ENST00000561091 HECW2Q9P2P5 1572 aa24.31■■□□□ 1.48
SHF-209ENST00000561091 INO80Q9ULG1 1556 aaPredicted RBP24.3■■□□□ 1.48
SHF-209ENST00000561091 KIDINS220Q9ULH0 1771 aa24.3■■□□□ 1.48
SHF-209ENST00000561091 RSPH4AQ5TD94 716 aa24.29■■□□□ 1.48
SHF-209ENST00000561091 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
SHF-209ENST00000561091 PTPRKQ15262 1439 aa24.28■■□□□ 1.48
SHF-209ENST00000561091 ADGBQ8N7X0 1667 aa24.27■■□□□ 1.48
SHF-209ENST00000561091 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
SHF-209ENST00000561091 ZFYVE16Q7Z3T8 1539 aa24.27■■□□□ 1.48
SHF-209ENST00000561091 SPAG9O60271 1321 aaKnown RBP24.27■■□□□ 1.48
SHF-209ENST00000561091 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
SHF-209ENST00000561091 SHANK2Q9UPX8 1470 aa24.26■■□□□ 1.47
SHF-209ENST00000561091 MYT1LQ9UL68 1186 aa24.25■■□□□ 1.47
SHF-209ENST00000561091 MLH3Q9UHC1 1453 aa24.25■■□□□ 1.47
SHF-209ENST00000561091 TSPY4P0CV99 314 aa24.24■■□□□ 1.47
SHF-209ENST00000561091 TSPY10P0CW01 314 aa24.24■■□□□ 1.47
SHF-209ENST00000561091 CHIC2Q9UKJ5 165 aa24.24■■□□□ 1.47
SHF-209ENST00000561091 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
SHF-209ENST00000561091 YEATS2Q9ULM3 1422 aa24.22■■□□□ 1.47
SHF-209ENST00000561091 DIP2CQ9Y2E4 1556 aa24.2■■□□□ 1.47
SHF-209ENST00000561091 ARHGEF40Q8TER5 1519 aa24.2■■□□□ 1.47
SHF-209ENST00000561091 MAGI2Q86UL8 1455 aa24.2■■□□□ 1.47
SHF-209ENST00000561091 RTEL1-TNFRSF6BF6WH68 1400 aa24.2■■□□□ 1.46
SHF-209ENST00000561091 PLXNC1O60486 1568 aa24.2■■□□□ 1.46
SHF-209ENST00000561091 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
SHF-209ENST00000561091 ADGRL2O95490 1459 aa24.18■■□□□ 1.46
SHF-209ENST00000561091 ANKRD30AQ9BXX3 1397 aa24.14■■□□□ 1.45
SHF-209ENST00000561091 NCOA1Q15788 1441 aa24.13■■□□□ 1.45
SHF-209ENST00000561091 RRP7BPQ9NSQ0 103 aa24.12■■□□□ 1.45
SHF-209ENST00000561091 SIGLEC1Q9BZZ2 1709 aa24.12■■□□□ 1.45
SHF-209ENST00000561091 ROCK1Q13464 1354 aa24.11■■□□□ 1.45
SHF-209ENST00000561091 ATP10AO60312 1499 aa24.11■■□□□ 1.45
SHF-209ENST00000561091 KIF15Q9NS87 1388 aa24.1■■□□□ 1.45
SHF-209ENST00000561091 GCC2Q8IWJ2 1684 aa24.1■■□□□ 1.45
SHF-209ENST00000561091 A2MP01023 1474 aa24.08■■□□□ 1.45
SHF-209ENST00000561091 DUOX2Q9NRD8 1548 aa24.07■■□□□ 1.44
SHF-209ENST00000561091 REREQ9P2R6 1566 aa24.06■■□□□ 1.44
SHF-209ENST00000561091 NAIPQ13075 1403 aa24.03■■□□□ 1.44
SHF-209ENST00000561091 DHX29Q7Z478 1369 aaKnown RBP24.03■■□□□ 1.44
SHF-209ENST00000561091 HFM1A2PYH4 1435 aa24.01■■□□□ 1.43
SHF-209ENST00000561091 EIF2AK4Q9P2K8 1649 aaKnown RBP24■■□□□ 1.43
SHF-209ENST00000561091 ERBINQ96RT1 1412 aa23.99■■□□□ 1.43
SHF-209ENST00000561091 ANKRD50Q9ULJ7 1429 aa23.99■■□□□ 1.43
SHF-209ENST00000561091 BCORL1Q5H9F3 1711 aa23.98■■□□□ 1.43
SHF-209ENST00000561091 AGLP35573 1532 aa23.97■■□□□ 1.43
SHF-209ENST00000561091 PCGF6Q9BYE7 350 aa23.97■■□□□ 1.43
SHF-209ENST00000561091 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
SHF-209ENST00000561091 KIF3BO15066 747 aa23.94■■□□□ 1.42
SHF-209ENST00000561091 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
SHF-209ENST00000561091 RNF17Q9BXT8 1623 aaKnown RBP23.92■■□□□ 1.42
SHF-209ENST00000561091 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms