RNA–Protein interactions for RNA: ENST00000561072.1

NIPA2-210, Transcript of NIPA magnesium transporter 2, human

TSL 4

Gene NIPA2, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPA2-210	ENST00000561072	ADGRL1	O94910	1474 aa		41.04	■■■■■ 4.16
NIPA2-210	ENST00000561072	CDC42BPA	Q5VT25	1732 aa		41.03	■■■■■ 4.16
NIPA2-210	ENST00000561072	EFCAB2	Q5VUJ9	269 aa		41.02	■■■■■ 4.16
NIPA2-210	ENST00000561072	TIAM1	Q13009	1591 aa		41	■■■■■ 4.15
NIPA2-210	ENST00000561072	SCAPER	Q9BY12	1400 aa		40.95	■■■■■ 4.15
NIPA2-210	ENST00000561072	ZMYM4	Q5VZL5	1548 aa		40.94	■■■■■ 4.14
NIPA2-210	ENST00000561072	POGZ	Q7Z3K3	1410 aa		40.93	■■■■■ 4.14
NIPA2-210	ENST00000561072	GPATCH8	Q9UKJ3	1502 aa	Known RBP	40.9	■■■■■ 4.14
NIPA2-210	ENST00000561072	MAP3K1	Q13233	1512 aa		40.88	■■■■■ 4.13
NIPA2-210	ENST00000561072	ARHGEF40	Q8TER5	1519 aa		40.87	■■■■■ 4.13
NIPA2-210	ENST00000561072	ABCC1	P33527	1531 aa		40.86	■■■■■ 4.13
NIPA2-210	ENST00000561072	SUPT6H	Q7KZ85	1726 aa	Known RBP	40.82	■■■■■ 4.13
NIPA2-210	ENST00000561072	CCNB3	Q8WWL7	1395 aa		40.82	■■■■■ 4.12
NIPA2-210	ENST00000561072	KDM4F	A0A1W2PPD8	638 aa		40.8	■■■■■ 4.12
NIPA2-210	ENST00000561072	ZNF518A	Q6AHZ1	1483 aa		40.8	■■■■■ 4.12
NIPA2-210	ENST00000561072	LRRC9	Q6ZRR7	1453 aa		40.8	■■■■■ 4.12
NIPA2-210	ENST00000561072	ITSN2	Q9NZM3	1697 aa		40.79	■■■■■ 4.12
NIPA2-210	ENST00000561072	MAGI2	Q86UL8	1455 aa		40.79	■■■■■ 4.12
NIPA2-210	ENST00000561072	SAMD9L	Q8IVG5	1584 aa		40.78	■■■■■ 4.12
NIPA2-210	ENST00000561072	KDM5C	P41229	1560 aa		40.78	■■■■■ 4.12
NIPA2-210	ENST00000561072	ZFYVE16	Q7Z3T8	1539 aa		40.77	■■■■■ 4.12
NIPA2-210	ENST00000561072	NCOA2	Q15596	1464 aa		40.76	■■■■■ 4.12
NIPA2-210	ENST00000561072	ARHGEF12	Q9NZN5	1544 aa		40.74	■■■■■ 4.11
NIPA2-210	ENST00000561072	AEBP2	Q6ZN18	517 aa	Predicted RBP	40.74	■■■■■ 4.11
NIPA2-210	ENST00000561072	YEATS2	Q9ULM3	1422 aa		40.71	■■■■■ 4.11
NIPA2-210	ENST00000561072	CFDP1	Q9UEE9	299 aa	Predicted RBP	40.69	■■■■■ 4.1
NIPA2-210	ENST00000561072	SYCP2	Q9BX26	1530 aa		40.67	■■■■■ 4.1
NIPA2-210	ENST00000561072	TRAPPC8	Q9Y2L5	1435 aa		40.67	■■■■■ 4.1
NIPA2-210	ENST00000561072	HECW2	Q9P2P5	1572 aa		40.66	■■■■■ 4.1
NIPA2-210	ENST00000561072	AFAP1	Q8N556	730 aa		40.65	■■■■■ 4.1
NIPA2-210	ENST00000561072	ZNF777	Q9ULD5	760 aa	Predicted RBP	40.65	■■■■■ 4.1
NIPA2-210	ENST00000561072	PLEKHH2	Q8IVE3	1493 aa		40.64	■■■■■ 4.1
NIPA2-210	ENST00000561072	KANK4	Q5T7N3	995 aa	Predicted RBP	40.63	■■■■■ 4.09
NIPA2-210	ENST00000561072	KIAA1107	Q9UPP5	1409 aa		40.61	■■■■■ 4.09
NIPA2-210	ENST00000561072	MLH3	Q9UHC1	1453 aa		40.58	■■■■■ 4.09
NIPA2-210	ENST00000561072	APLP2	Q06481	763 aa		40.56	■■■■■ 4.08
NIPA2-210	ENST00000561072	SIGLEC1	Q9BZZ2	1709 aa		40.56	■■■■■ 4.08
NIPA2-210	ENST00000561072	BCORL1	Q5H9F3	1711 aa		40.53	■■■■■ 4.08
NIPA2-210	ENST00000561072	ATP10A	O60312	1499 aa		40.53	■■■■■ 4.08
NIPA2-210	ENST00000561072	DIP2C	Q9Y2E4	1556 aa		40.52	■■■■■ 4.08
NIPA2-210	ENST00000561072	C9orf84	Q5VXU9	1444 aa		40.51	■■■■■ 4.08
NIPA2-210	ENST00000561072	ABCA6	Q8N139	1617 aa		40.51	■■■■■ 4.08
NIPA2-210	ENST00000561072	ADAMTSL3	P82987	1691 aa		40.5	■■■■■ 4.07
NIPA2-210	ENST00000561072	KIDINS220	Q9ULH0	1771 aa		40.5	■■■■■ 4.07
NIPA2-210	ENST00000561072	HNRNPM	P52272	730 aa	Known RBP eCLIP	40.49	■■■■■ 4.07
NIPA2-210	ENST00000561072	ZNF644	Q9H582	1327 aa	Predicted RBP	40.48	■■■■■ 4.07
NIPA2-210	ENST00000561072	ARID4B	Q4LE39	1312 aa	Predicted RBP	40.47	■■■■■ 4.07
NIPA2-210	ENST00000561072	CAMSAP2	Q08AD1	1489 aa		40.46	■■■■■ 4.07
NIPA2-210	ENST00000561072	RERE	Q9P2R6	1566 aa		40.45	■■■■■ 4.07
NIPA2-210	ENST00000561072	MBD5	Q9P267	1494 aa		40.45	■■■■■ 4.07
NIPA2-210	ENST00000561072	MYT1L	Q9UL68	1186 aa		40.43	■■■■■ 4.06
NIPA2-210	ENST00000561072	INO80	Q9ULG1	1556 aa	Predicted RBP	40.43	■■■■■ 4.06
NIPA2-210	ENST00000561072	MYOM3	Q5VTT5	1437 aa		40.41	■■■■■ 4.06
NIPA2-210	ENST00000561072	ATP7A	Q04656	1500 aa		40.38	■■■■■ 4.06
NIPA2-210	ENST00000561072	SPAG9	O60271	1321 aa	Known RBP	40.38	■■■■■ 4.05
NIPA2-210	ENST00000561072	MADD	Q8WXG6	1647 aa		40.38	■■■■■ 4.05
NIPA2-210	ENST00000561072	MIA2	Q96PC5	1412 aa		40.35	■■■■■ 4.05
NIPA2-210	ENST00000561072	CCDC141	Q6ZP82	1450 aa		40.32	■■■■■ 4.05
NIPA2-210	ENST00000561072	ARHGEF5	Q12774	1597 aa		40.31	■■■■■ 4.04
NIPA2-210	ENST00000561072	AGL	P35573	1532 aa		40.28	■■■■■ 4.04
NIPA2-210	ENST00000561072	PTPRM	P28827	1452 aa		40.26	■■■■■ 4.03
NIPA2-210	ENST00000561072	RIMS1	Q86UR5	1692 aa	Known RBP	40.24	■■■■■ 4.03
NIPA2-210	ENST00000561072	RTEL1-TNFRSF6B	F6WH68	1400 aa		40.24	■■■■■ 4.03
NIPA2-210	ENST00000561072	RSPH4A	Q5TD94	716 aa		40.23	■■■■■ 4.03
NIPA2-210	ENST00000561072	FER1L4	A9Z1Z3	1794 aa		40.23	■■■■■ 4.03
NIPA2-210	ENST00000561072	PLXNC1	O60486	1568 aa		40.21	■■■■■ 4.03
NIPA2-210	ENST00000561072	ADGB	Q8N7X0	1667 aa		40.2	■■■■■ 4.03
NIPA2-210	ENST00000561072	MLEC	Q14165	292 aa		40.19	■■■■■ 4.02
NIPA2-210	ENST00000561072	PTPN23	Q9H3S7	1636 aa		40.18	■■■■■ 4.02
NIPA2-210	ENST00000561072	FGD6	Q6ZV73	1430 aa		40.16	■■■■■ 4.02
NIPA2-210	ENST00000561072	A2M	P01023	1474 aa		40.16	■■■■■ 4.02
NIPA2-210	ENST00000561072	MAST1	Q9Y2H9	1570 aa		40.11	■■■■■ 4.01
NIPA2-210	ENST00000561072	TCOF1	Q13428	1488 aa	Known RBP	40.11	■■■■■ 4.01
NIPA2-210	ENST00000561072	TSPY4	P0CV99	314 aa		40.05	■■■■■ 4
NIPA2-210	ENST00000561072	TSPY10	P0CW01	314 aa		40.05	■■■■■ 4
NIPA2-210	ENST00000561072	CROCC2	H7BZ55	1655 aa		40.03	■■■■■ 4
NIPA2-210	ENST00000561072	DNMT1	P26358	1616 aa	Known RBP	40	■■■■□ 3.99
NIPA2-210	ENST00000561072	SHANK2	Q9UPX8	1470 aa		39.99	■■■■□ 3.99
NIPA2-210	ENST00000561072	DHX29	Q7Z478	1369 aa	Known RBP	39.98	■■■■□ 3.99
NIPA2-210	ENST00000561072	ABCC5	O15440	1437 aa		39.96	■■■■□ 3.99
NIPA2-210	ENST00000561072	DAPK1	P53355	1430 aa		39.93	■■■■□ 3.98
NIPA2-210	ENST00000561072	CNTLN	Q9NXG0	1405 aa		39.9	■■■■□ 3.98
NIPA2-210	ENST00000561072	MROH2A	A6NES4	1674 aa		39.86	■■■■□ 3.97
NIPA2-210	ENST00000561072	C3	P01024	1663 aa		39.86	■■■■□ 3.97
NIPA2-210	ENST00000561072	ESF1	Q9H501	851 aa	Known RBP	39.85	■■■■□ 3.97
NIPA2-210	ENST00000561072	PLPPR3	Q6T4P5	718 aa		39.83	■■■■□ 3.97
NIPA2-210	ENST00000561072	PPARGC1B	Q86YN6	1023 aa	Known RBP	39.81	■■■■□ 3.96
NIPA2-210	ENST00000561072	EIF2AK4	Q9P2K8	1649 aa	Known RBP	39.8	■■■■□ 3.96
NIPA2-210	ENST00000561072	CLTC	Q00610	1675 aa	Known RBP	39.8	■■■■□ 3.96
NIPA2-210	ENST00000561072	GGT6	Q6P531	493 aa		39.8	■■■■□ 3.96
NIPA2-210	ENST00000561072	DUOX2	Q9NRD8	1548 aa		39.8	■■■■□ 3.96
NIPA2-210	ENST00000561072	FAM50A	Q14320	339 aa	Known RBP	39.78	■■■■□ 3.96
NIPA2-210	ENST00000561072	LMTK3	Q96Q04	1460 aa		39.77	■■■■□ 3.96
NIPA2-210	ENST00000561072	KIF3B	O15066	747 aa		39.77	■■■■□ 3.96
NIPA2-210	ENST00000561072	CEBPA	P49715	358 aa	Predicted RBP	39.77	■■■■□ 3.96
NIPA2-210	ENST00000561072	PPP6R1	Q9UPN7	881 aa		39.76	■■■■□ 3.96
NIPA2-210	ENST00000561072	KIF15	Q9NS87	1388 aa		39.75	■■■■□ 3.95
NIPA2-210	ENST00000561072	RNF17	Q9BXT8	1623 aa	Known RBP	39.75	■■■■□ 3.95
NIPA2-210	ENST00000561072	FAM135A	Q9P2D6	1515 aa		39.75	■■■■□ 3.95
NIPA2-210	ENST00000561072	PREX1	Q8TCU6	1659 aa		39.71	■■■■□ 3.95

Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms