RNA–Protein interactions for RNA: ENST00000560985.5

TICRR-202, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TICRR, Length 6,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-202ENST00000560985 CHMP4BQ9H444 224 aaKnown RBP17.71■□□□□ 0.43
TICRR-202ENST00000560985 TPM4P67936 248 aa17.71■□□□□ 0.43
TICRR-202ENST00000560985 FOXD4L5Q5VV16 416 aaPredicted RBP17.71■□□□□ 0.43
TICRR-202ENST00000560985 FOXD4L4Q8WXT5 416 aaPredicted RBP17.71■□□□□ 0.43
TICRR-202ENST00000560985 MS4A1P11836 297 aa17.7■□□□□ 0.42
TICRR-202ENST00000560985 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
TICRR-202ENST00000560985 KIAA1211Q6ZU35 1233 aa17.69■□□□□ 0.42
TICRR-202ENST00000560985 TIMELESSQ9UNS1 1208 aa17.69■□□□□ 0.42
TICRR-202ENST00000560985 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
TICRR-202ENST00000560985 MLECQ14165 292 aa17.67■□□□□ 0.42
TICRR-202ENST00000560985 SYAP1Q96A49 352 aaPredicted RBP17.67■□□□□ 0.42
TICRR-202ENST00000560985 CDCA8Q53HL2 280 aa17.66■□□□□ 0.42
TICRR-202ENST00000560985 CCAR2Q8N163 923 aaKnown RBP17.66■□□□□ 0.42
TICRR-202ENST00000560985 POGKQ9P215 609 aa17.63■□□□□ 0.41
TICRR-202ENST00000560985 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
TICRR-202ENST00000560985 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
TICRR-202ENST00000560985 TAF7LQ5H9L4 462 aa17.62■□□□□ 0.41
TICRR-202ENST00000560985 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
TICRR-202ENST00000560985 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
TICRR-202ENST00000560985 PES1O00541 588 aaKnown RBP17.59■□□□□ 0.41
TICRR-202ENST00000560985 RASSF8Q8NHQ8 419 aa17.59■□□□□ 0.41
TICRR-202ENST00000560985 HTATSF1O43719 755 aaKnown RBP17.59■□□□□ 0.41
TICRR-202ENST00000560985 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
TICRR-202ENST00000560985 TPM3P06753 285 aa17.58■□□□□ 0.4
TICRR-202ENST00000560985 ZNF592Q92610 1267 aa17.57■□□□□ 0.4
TICRR-202ENST00000560985 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
TICRR-202ENST00000560985 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
TICRR-202ENST00000560985 CCDC9Q9Y3X0 531 aaKnown RBP17.56■□□□□ 0.4
TICRR-202ENST00000560985 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
TICRR-202ENST00000560985 FOXD4L6Q3SYB3 417 aaPredicted RBP17.56■□□□□ 0.4
TICRR-202ENST00000560985 FOXD4L3Q6VB84 417 aaPredicted RBP17.56■□□□□ 0.4
TICRR-202ENST00000560985 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
TICRR-202ENST00000560985 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
TICRR-202ENST00000560985 IPO9Q96P70 1041 aaKnown RBP17.54■□□□□ 0.4
TICRR-202ENST00000560985 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
TICRR-202ENST00000560985 CFAP44Q96MT7 982 aa17.52■□□□□ 0.4
TICRR-202ENST00000560985 USP35Q9P2H5 1018 aa17.51■□□□□ 0.39
TICRR-202ENST00000560985 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
TICRR-202ENST00000560985 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
TICRR-202ENST00000560985 RTF1Q92541 710 aaKnown RBP17.5■□□□□ 0.39
TICRR-202ENST00000560985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
TICRR-202ENST00000560985 FAM13BQ9NYF5 915 aa17.49■□□□□ 0.39
TICRR-202ENST00000560985 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
TICRR-202ENST00000560985 VPS53Q5VIR6 699 aa17.49■□□□□ 0.39
TICRR-202ENST00000560985 TPD52L1Q16890 204 aaPredicted RBP17.48■□□□□ 0.39
TICRR-202ENST00000560985 CSPP1Q1MSJ5 1256 aa17.48■□□□□ 0.39
TICRR-202ENST00000560985 MORC1Q86VD1 984 aa17.47■□□□□ 0.39
TICRR-202ENST00000560985 RWDD1Q9H446 243 aaPredicted RBP17.47■□□□□ 0.39
TICRR-202ENST00000560985 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
TICRR-202ENST00000560985 PHF14O94880 888 aa17.46■□□□□ 0.39
TICRR-202ENST00000560985 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
TICRR-202ENST00000560985 GORABQ5T7V8 394 aa17.45■□□□□ 0.38
TICRR-202ENST00000560985 SF3A1Q15459 793 aaKnown RBP17.44■□□□□ 0.38
TICRR-202ENST00000560985 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
TICRR-202ENST00000560985 CLIP1P30622 1438 aa17.43■□□□□ 0.38
TICRR-202ENST00000560985 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
TICRR-202ENST00000560985 TMF1P82094 1093 aa17.43■□□□□ 0.38
TICRR-202ENST00000560985 IPO8O15397 1037 aaKnown RBP17.42■□□□□ 0.38
TICRR-202ENST00000560985 GPS2Q13227 327 aa17.42■□□□□ 0.38
TICRR-202ENST00000560985 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
TICRR-202ENST00000560985 MARCH6O60337 910 aa17.41■□□□□ 0.38
TICRR-202ENST00000560985 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
TICRR-202ENST00000560985 TOMM22Q9NS69 142 aa17.41■□□□□ 0.38
TICRR-202ENST00000560985 GOLGA6L19H0YKK7 550 aa17.41■□□□□ 0.38
TICRR-202ENST00000560985 TSR1Q2NL82 804 aaKnown RBP17.4■□□□□ 0.38
TICRR-202ENST00000560985 DCAF11Q8TEB1 546 aa17.4■□□□□ 0.38
TICRR-202ENST00000560985 APPP05067 770 aa17.4■□□□□ 0.38
TICRR-202ENST00000560985 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
TICRR-202ENST00000560985 PMFBP1Q8TBY8 1022 aa17.39■□□□□ 0.37
TICRR-202ENST00000560985 TEX35Q5T0J7 233 aa17.39■□□□□ 0.37
TICRR-202ENST00000560985 KIF16BQ96L93 1317 aa17.39■□□□□ 0.37
TICRR-202ENST00000560985 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
TICRR-202ENST00000560985 H3BQV1 296 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 IFFO2Q5TF58 517 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 GPATCH3Q96I76 525 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 GSE1Q14687 1217 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 CCDC70Q6NSX1 233 aa17.38■□□□□ 0.37
TICRR-202ENST00000560985 FBXW7Q969H0 707 aa17.37■□□□□ 0.37
TICRR-202ENST00000560985 PCMTD1Q96MG8 357 aaPredicted RBP17.36■□□□□ 0.37
TICRR-202ENST00000560985 BECN2A8MW95 431 aa17.35■□□□□ 0.37
TICRR-202ENST00000560985 ST18O60284 1047 aa17.34■□□□□ 0.37
TICRR-202ENST00000560985 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
TICRR-202ENST00000560985 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
TICRR-202ENST00000560985 STK26Q9P289 416 aa17.33■□□□□ 0.37
TICRR-202ENST00000560985 CFDP1Q9UEE9 299 aaPredicted RBP17.33■□□□□ 0.37
TICRR-202ENST00000560985 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.36
TICRR-202ENST00000560985 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
TICRR-202ENST00000560985 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
TICRR-202ENST00000560985 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
TICRR-202ENST00000560985 HOMER1Q86YM7 354 aa17.32■□□□□ 0.36
TICRR-202ENST00000560985 PAK3O75914 559 aaPredicted RBP17.32■□□□□ 0.36
TICRR-202ENST00000560985 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
TICRR-202ENST00000560985 PLCD4Q9BRC7 762 aa17.32■□□□□ 0.36
TICRR-202ENST00000560985 MCTP1Q6DN14 999 aa17.31■□□□□ 0.36
TICRR-202ENST00000560985 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
TICRR-202ENST00000560985 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms