RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 POTEB3A0JP26 581 aa9.07□□□□□ -0.96
HERC1-211ENST00000560983 DOK7Q18PE1 504 aa9.07□□□□□ -0.96
HERC1-211ENST00000560983 POTEBQ6S5H4 581 aa9.07□□□□□ -0.96
HERC1-211ENST00000560983 KIF3CO14782 793 aa9.06□□□□□ -0.96
HERC1-211ENST00000560983 EMP3P54852 163 aa9.06□□□□□ -0.96
HERC1-211ENST00000560983 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
HERC1-211ENST00000560983 ZSWIM6Q9HCJ5 1215 aa9.04□□□□□ -0.96
HERC1-211ENST00000560983 PPP1R37O75864 691 aa9.01□□□□□ -0.97
HERC1-211ENST00000560983 GPR153Q6NV75 609 aa9.01□□□□□ -0.97
HERC1-211ENST00000560983 FAM205CA6NFA0 338 aa9□□□□□ -0.97
HERC1-211ENST00000560983 ZNF710Q8N1W2 664 aa9□□□□□ -0.97
HERC1-211ENST00000560983 RIMBP2O15034 1052 aa8.99□□□□□ -0.97
HERC1-211ENST00000560983 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
HERC1-211ENST00000560983 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
HERC1-211ENST00000560983 C2orf72A6NCS6 295 aa8.98□□□□□ -0.97
HERC1-211ENST00000560983 NKX1-1Q15270 411 aaPredicted RBP8.96□□□□□ -0.98
HERC1-211ENST00000560983 SPNS2Q8IVW8 549 aa8.95□□□□□ -0.98
HERC1-211ENST00000560983 SLC34A2O95436 690 aa8.94□□□□□ -0.98
HERC1-211ENST00000560983 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
HERC1-211ENST00000560983 ERBB3P21860 1342 aa8.91□□□□□ -0.98
HERC1-211ENST00000560983 CCDC180Q9P1Z9 1646 aa8.91□□□□□ -0.98
HERC1-211ENST00000560983 MMRN1Q13201 1228 aa8.9□□□□□ -0.98
HERC1-211ENST00000560983 ARSIQ5FYB1 569 aa8.9□□□□□ -0.98
HERC1-211ENST00000560983 VARS2Q5ST30 1063 aaKnown RBP8.89□□□□□ -0.99
HERC1-211ENST00000560983 TMC2Q8TDI7 906 aa8.89□□□□□ -0.99
HERC1-211ENST00000560983 ZNF687Q8N1G0 1237 aa8.88□□□□□ -0.99
HERC1-211ENST00000560983 FOXK1P85037 733 aa8.87□□□□□ -0.99
HERC1-211ENST00000560983 KHSRPQ92945 711 aaKnown RBP eCLIP8.87□□□□□ -0.99
HERC1-211ENST00000560983 ZNF316A6NFI3 1004 aaPredicted RBP8.86□□□□□ -0.99
HERC1-211ENST00000560983 GPHNQ9NQX3 736 aaPredicted RBP8.86□□□□□ -0.99
HERC1-211ENST00000560983 RYDENQ9NUL5 291 aaKnown RBP8.86□□□□□ -0.99
HERC1-211ENST00000560983 KDM4FA0A1W2PPD8 638 aa8.85□□□□□ -0.99
HERC1-211ENST00000560983 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
HERC1-211ENST00000560983 PTCD2Q8WV60 388 aaKnown RBP8.83□□□□□ -1
HERC1-211ENST00000560983 GTPBP6O43824 516 aaPredicted RBP8.82□□□□□ -1
HERC1-211ENST00000560983 CRISPLD2Q9H0B8 497 aa8.82□□□□□ -1
HERC1-211ENST00000560983 NUDT7P0C024 238 aa8.81□□□□□ -1
HERC1-211ENST00000560983 DSG2Q14126 1118 aa8.8□□□□□ -1
HERC1-211ENST00000560983 PLPP6Q8IY26 295 aa8.8□□□□□ -1
HERC1-211ENST00000560983 RB1CC1Q8TDY2 1594 aa8.8□□□□□ -1
HERC1-211ENST00000560983 LHX6Q9UPM6 363 aa8.78□□□□□ -1
HERC1-211ENST00000560983 POTEEQ6S8J3 1075 aa8.76□□□□□ -1.01
HERC1-211ENST00000560983 NCKAP5LQ9HCH0 1330 aa8.76□□□□□ -1.01
HERC1-211ENST00000560983 PBX2P40425 430 aa8.74□□□□□ -1.01
HERC1-211ENST00000560983 OXER1Q8TDS5 423 aa8.74□□□□□ -1.01
HERC1-211ENST00000560983 PSDA5PKW4 1024 aaPredicted RBP8.72□□□□□ -1.01
HERC1-211ENST00000560983 LSM11P83369 360 aaKnown RBP eCLIP8.71□□□□□ -1.02
HERC1-211ENST00000560983 MFSD10Q14728 455 aa8.71□□□□□ -1.02
HERC1-211ENST00000560983 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
HERC1-211ENST00000560983 PDE4AP27815 886 aa8.7□□□□□ -1.02
HERC1-211ENST00000560983 PTGER2P43116 358 aa8.7□□□□□ -1.02
HERC1-211ENST00000560983 CECR2Q9BXF3 1484 aa8.69□□□□□ -1.02
HERC1-211ENST00000560983 TBC1D12O60347 775 aa8.68□□□□□ -1.02
HERC1-211ENST00000560983 RNF166Q96A37 237 aaPredicted RBP8.67□□□□□ -1.02
HERC1-211ENST00000560983 DCAF8L2P0C7V8 631 aa8.66□□□□□ -1.02
HERC1-211ENST00000560983 MYT1LQ9UL68 1186 aa8.66□□□□□ -1.02
HERC1-211ENST00000560983 CADPS2Q86UW7 1296 aa8.65□□□□□ -1.02
HERC1-211ENST00000560983 AXIN2Q9Y2T1 843 aa8.65□□□□□ -1.02
HERC1-211ENST00000560983 NACADO15069 1562 aa8.65□□□□□ -1.03
HERC1-211ENST00000560983 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
HERC1-211ENST00000560983 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
HERC1-211ENST00000560983 ANKRD13DQ6ZTN6 518 aa8.64□□□□□ -1.03
HERC1-211ENST00000560983 DDX27Q96GQ7 796 aaKnown RBP8.64□□□□□ -1.03
HERC1-211ENST00000560983 ANO8Q9HCE9 1232 aaPredicted RBP8.64□□□□□ -1.03
HERC1-211ENST00000560983 BBXQ8WY36 941 aaPredicted RBP8.63□□□□□ -1.03
HERC1-211ENST00000560983 LARP6Q9BRS8 491 aaKnown RBP8.63□□□□□ -1.03
HERC1-211ENST00000560983 BICRAQ9NZM4 1560 aa8.63□□□□□ -1.03
HERC1-211ENST00000560983 PPP4R3BQ5MIZ7 849 aa8.62□□□□□ -1.03
HERC1-211ENST00000560983 UPF1Q92900 1129 aaKnown RBP eCLIP8.62□□□□□ -1.03
HERC1-211ENST00000560983 TK2O00142 265 aa8.6□□□□□ -1.03
HERC1-211ENST00000560983 ADGRD1Q6QNK2 874 aa8.6□□□□□ -1.03
HERC1-211ENST00000560983 EMILIN3Q9NT22 766 aa8.6□□□□□ -1.03
HERC1-211ENST00000560983 HRO43593 1189 aa8.59□□□□□ -1.03
HERC1-211ENST00000560983 FOSBP53539 338 aa8.59□□□□□ -1.03
HERC1-211ENST00000560983 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
HERC1-211ENST00000560983 RTN4Q9NQC3 1192 aaKnown RBP8.59□□□□□ -1.03
HERC1-211ENST00000560983 CAMK2BQ13554 666 aa8.58□□□□□ -1.04
HERC1-211ENST00000560983 PSEN2P49810 448 aa8.57□□□□□ -1.04
HERC1-211ENST00000560983 CC2D2AQ9P2K1 1620 aa8.57□□□□□ -1.04
HERC1-211ENST00000560983 EVI5O60447 810 aa8.56□□□□□ -1.04
HERC1-211ENST00000560983 JPH4Q96JJ6 628 aa8.56□□□□□ -1.04
HERC1-211ENST00000560983 BCL2L12Q9HB09 334 aa8.56□□□□□ -1.04
HERC1-211ENST00000560983 ZNF454Q8N9F8 522 aa8.54□□□□□ -1.04
HERC1-211ENST00000560983 SLC4A5Q9BY07 1137 aa8.54□□□□□ -1.04
HERC1-211ENST00000560983 KCNK17Q96T54 332 aa8.52□□□□□ -1.05
HERC1-211ENST00000560983 MAP3K9P80192 1104 aa8.51□□□□□ -1.05
HERC1-211ENST00000560983 ZDHHC16Q969W1 377 aa8.5□□□□□ -1.05
HERC1-211ENST00000560983 VPS9D1Q9Y2B5 631 aa8.5□□□□□ -1.05
HERC1-211ENST00000560983 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
HERC1-211ENST00000560983 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
HERC1-211ENST00000560983 ADAM33Q9BZ11 813 aa8.49□□□□□ -1.05
HERC1-211ENST00000560983 PTPREP23469 700 aa8.48□□□□□ -1.05
HERC1-211ENST00000560983 ZBED2Q9BTP6 218 aa8.48□□□□□ -1.05
HERC1-211ENST00000560983 PCDHGA10Q9Y5H3 936 aa8.48□□□□□ -1.05
HERC1-211ENST00000560983 BHMG1C9JSJ3 638 aaPredicted RBP8.47□□□□□ -1.05
HERC1-211ENST00000560983 KCNH8Q96L42 1107 aa8.47□□□□□ -1.05
HERC1-211ENST00000560983 PHF14O94880 888 aa8.46□□□□□ -1.06
HERC1-211ENST00000560983 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.46□□□□□ -1.06
HERC1-211ENST00000560983 DPYSL4O14531 572 aa8.44□□□□□ -1.06
HERC1-211ENST00000560983 HCSTQ9UBK5 93 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms