RNA–Protein interactions for RNA: ENST00000560761.5

CPNE6-216, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-216ENST00000560761 RIMS1Q86UR5 1692 aaKnown RBP29.12■■■□□ 2.25
CPNE6-216ENST00000560761 EFCAB2Q5VUJ9 269 aa29.1■■■□□ 2.25
CPNE6-216ENST00000560761 CDK11AQ9UQ88 783 aaPredicted RBP29.09■■■□□ 2.25
CPNE6-216ENST00000560761 POGZQ7Z3K3 1410 aa29.09■■■□□ 2.25
CPNE6-216ENST00000560761 LMTK3Q96Q04 1460 aa29.09■■■□□ 2.25
CPNE6-216ENST00000560761 PCF11O94913 1555 aaKnown RBP29.08■■■□□ 2.25
CPNE6-216ENST00000560761 KIF14Q15058 1648 aa29.07■■■□□ 2.24
CPNE6-216ENST00000560761 MAGI2Q86UL8 1455 aa29.07■■■□□ 2.24
CPNE6-216ENST00000560761 HSPA2P54652 639 aa29.06■■■□□ 2.24
CPNE6-216ENST00000560761 TROQ12816 1431 aaPredicted RBP29.03■■■□□ 2.24
CPNE6-216ENST00000560761 AFAP1Q8N556 730 aa29.01■■■□□ 2.23
CPNE6-216ENST00000560761 FBXO41Q8TF61 875 aa28.99■■■□□ 2.23
CPNE6-216ENST00000560761 MYO5CQ9NQX4 1742 aa28.99■■■□□ 2.23
CPNE6-216ENST00000560761 ATP10AO60312 1499 aa28.98■■■□□ 2.23
CPNE6-216ENST00000560761 LRRIQ1Q96JM4 1722 aa28.98■■■□□ 2.23
CPNE6-216ENST00000560761 ARHGAP5Q13017 1502 aa28.95■■■□□ 2.23
CPNE6-216ENST00000560761 CLIP1P30622 1438 aa28.94■■■□□ 2.22
CPNE6-216ENST00000560761 C9orf84Q5VXU9 1444 aa28.93■■■□□ 2.22
CPNE6-216ENST00000560761 CEBPAP49715 358 aaPredicted RBP28.92■■■□□ 2.22
CPNE6-216ENST00000560761 MYT1LQ9UL68 1186 aa28.91■■■□□ 2.22
CPNE6-216ENST00000560761 ZNF518AQ6AHZ1 1483 aa28.89■■■□□ 2.22
CPNE6-216ENST00000560761 ARHGEF12Q9NZN5 1544 aa28.89■■■□□ 2.21
CPNE6-216ENST00000560761 FER1L4A9Z1Z3 1794 aa28.88■■■□□ 2.21
CPNE6-216ENST00000560761 CASKIN1Q8WXD9 1431 aa28.87■■■□□ 2.21
CPNE6-216ENST00000560761 KDM5CP41229 1560 aa28.84■■■□□ 2.21
CPNE6-216ENST00000560761 CDC42BPBQ9Y5S2 1711 aa28.83■■■□□ 2.21
CPNE6-216ENST00000560761 TRAPPC8Q9Y2L5 1435 aa28.82■■■□□ 2.2
CPNE6-216ENST00000560761 CCDC18Q5T9S5 1454 aa28.79■■■□□ 2.2
CPNE6-216ENST00000560761 DIP2CQ9Y2E4 1556 aa28.79■■■□□ 2.2
CPNE6-216ENST00000560761 MLH3Q9UHC1 1453 aa28.76■■■□□ 2.19
CPNE6-216ENST00000560761 PREX2Q70Z35 1606 aa28.75■■■□□ 2.19
CPNE6-216ENST00000560761 ABCA6Q8N139 1617 aa28.74■■■□□ 2.19
CPNE6-216ENST00000560761 ZNF777Q9ULD5 760 aaPredicted RBP28.74■■■□□ 2.19
CPNE6-216ENST00000560761 ABCC1P33527 1531 aa28.74■■■□□ 2.19
CPNE6-216ENST00000560761 FYCO1Q9BQS8 1478 aa28.7■■■□□ 2.18
CPNE6-216ENST00000560761 CERKQ8TCT0 537 aa28.68■■■□□ 2.18
CPNE6-216ENST00000560761 CDC42BPAQ5VT25 1732 aa28.68■■■□□ 2.18
CPNE6-216ENST00000560761 ITSN2Q9NZM3 1697 aa28.67■■■□□ 2.18
CPNE6-216ENST00000560761 REREQ9P2R6 1566 aa28.67■■■□□ 2.18
CPNE6-216ENST00000560761 HNRNPMP52272 730 aaKnown RBP eCLIP28.66■■■□□ 2.18
CPNE6-216ENST00000560761 PREX1Q8TCU6 1659 aa28.66■■■□□ 2.18
CPNE6-216ENST00000560761 GPATCH8Q9UKJ3 1502 aaKnown RBP28.64■■■□□ 2.17
CPNE6-216ENST00000560761 KIDINS220Q9ULH0 1771 aa28.63■■■□□ 2.17
CPNE6-216ENST00000560761 UHRF1BP1Q6BDS2 1440 aa28.62■■■□□ 2.17
CPNE6-216ENST00000560761 ESF1Q9H501 851 aaKnown RBP28.62■■■□□ 2.17
CPNE6-216ENST00000560761 AGLP35573 1532 aa28.62■■■□□ 2.17
CPNE6-216ENST00000560761 SAMD9LQ8IVG5 1584 aa28.61■■■□□ 2.17
CPNE6-216ENST00000560761 C3P01024 1663 aa28.58■■■□□ 2.16
CPNE6-216ENST00000560761 CFDP1Q9UEE9 299 aaPredicted RBP28.57■■■□□ 2.16
CPNE6-216ENST00000560761 SPAG9O60271 1321 aaKnown RBP28.57■■■□□ 2.16
CPNE6-216ENST00000560761 SYCP2Q9BX26 1530 aa28.57■■■□□ 2.16
CPNE6-216ENST00000560761 STRCQ7RTU9 1775 aa28.56■■■□□ 2.16
CPNE6-216ENST00000560761 DMRT2Q9Y5R5 561 aa28.53■■■□□ 2.16
CPNE6-216ENST00000560761 CCNB3Q8WWL7 1395 aa28.52■■■□□ 2.16
CPNE6-216ENST00000560761 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
CPNE6-216ENST00000560761 ZNF644Q9H582 1327 aaPredicted RBP28.5■■■□□ 2.15
CPNE6-216ENST00000560761 SETD1BQ9UPS6 1966 aaKnown RBP28.5■■■□□ 2.15
CPNE6-216ENST00000560761 KIAA1107Q9UPP5 1409 aa28.48■■■□□ 2.15
CPNE6-216ENST00000560761 CNTLNQ9NXG0 1405 aa28.46■■■□□ 2.15
CPNE6-216ENST00000560761 ZMYM3Q14202 1370 aa28.45■■■□□ 2.14
CPNE6-216ENST00000560761 ATP7AQ04656 1500 aa28.44■■■□□ 2.14
CPNE6-216ENST00000560761 SUPT6HQ7KZ85 1726 aaKnown RBP28.44■■■□□ 2.14
CPNE6-216ENST00000560761 PLEKHH2Q8IVE3 1493 aa28.42■■■□□ 2.14
CPNE6-216ENST00000560761 GGT6Q6P531 493 aa28.41■■■□□ 2.14
CPNE6-216ENST00000560761 A2MP01023 1474 aa28.4■■■□□ 2.14
CPNE6-216ENST00000560761 PTPRTO14522 1441 aa28.4■■■□□ 2.14
CPNE6-216ENST00000560761 INO80Q9ULG1 1556 aaPredicted RBP28.39■■■□□ 2.14
CPNE6-216ENST00000560761 TIAM1Q13009 1591 aa28.37■■■□□ 2.13
CPNE6-216ENST00000560761 PLXNC1O60486 1568 aa28.36■■■□□ 2.13
CPNE6-216ENST00000560761 NPATQ14207 1427 aa28.35■■■□□ 2.13
CPNE6-216ENST00000560761 NCOA1Q15788 1441 aa28.35■■■□□ 2.13
CPNE6-216ENST00000560761 CEP162Q5TB80 1403 aa28.35■■■□□ 2.13
CPNE6-216ENST00000560761 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
CPNE6-216ENST00000560761 MROH2AA6NES4 1674 aa28.33■■■□□ 2.13
CPNE6-216ENST00000560761 CLTCQ00610 1675 aaKnown RBP28.33■■■□□ 2.13
CPNE6-216ENST00000560761 NCKAP5LQ9HCH0 1330 aa28.33■■■□□ 2.13
CPNE6-216ENST00000560761 EHBP1L1Q8N3D4 1523 aa28.31■■■□□ 2.12
CPNE6-216ENST00000560761 CAMSAP1Q5T5Y3 1602 aa28.31■■■□□ 2.12
CPNE6-216ENST00000560761 PTPRKQ15262 1439 aa28.28■■■□□ 2.12
CPNE6-216ENST00000560761 LTBP4Q8N2S1 1624 aa28.28■■■□□ 2.12
CPNE6-216ENST00000560761 DHX29Q7Z478 1369 aaKnown RBP28.24■■■□□ 2.11
CPNE6-216ENST00000560761 RTEL1-TNFRSF6BF6WH68 1400 aa28.23■■■□□ 2.11
CPNE6-216ENST00000560761 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
CPNE6-216ENST00000560761 NCOA2Q15596 1464 aa28.22■■■□□ 2.11
CPNE6-216ENST00000560761 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
CPNE6-216ENST00000560761 PPP6R1Q9UPN7 881 aa28.22■■■□□ 2.11
CPNE6-216ENST00000560761 KIF3BO15066 747 aa28.2■■■□□ 2.1
CPNE6-216ENST00000560761 ZNF335Q9H4Z2 1342 aaPredicted RBP28.19■■■□□ 2.1
CPNE6-216ENST00000560761 MYO3AQ8NEV4 1616 aa28.19■■■□□ 2.1
CPNE6-216ENST00000560761 FBXO31Q5XUX0 539 aaPredicted RBP28.18■■■□□ 2.1
CPNE6-216ENST00000560761 CAMSAP2Q08AD1 1489 aa28.17■■■□□ 2.1
CPNE6-216ENST00000560761 CEP170BQ9Y4F5 1589 aaPredicted RBP28.16■■■□□ 2.1
CPNE6-216ENST00000560761 PKD2Q13563 968 aa28.15■■■□□ 2.1
CPNE6-216ENST00000560761 CCDC141Q6ZP82 1450 aa28.15■■■□□ 2.1
CPNE6-216ENST00000560761 ZNF142P52746 1687 aaPredicted RBP28.13■■■□□ 2.09
CPNE6-216ENST00000560761 PLA2R1Q13018 1463 aa28.12■■■□□ 2.09
CPNE6-216ENST00000560761 TCOF1Q13428 1488 aaKnown RBP28.12■■■□□ 2.09
CPNE6-216ENST00000560761 DISP3Q9P2K9 1392 aa28.11■■■□□ 2.09
CPNE6-216ENST00000560761 RSPH4AQ5TD94 716 aa28.1■■■□□ 2.09
CPNE6-216ENST00000560761 ILDR2Q71H61 639 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms