RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	KCNH8	Q96L42	1107 aa		12.85	□□□□□ -0.35
RNF31-222	ENST00000560631	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.85	□□□□□ -0.35
RNF31-222	ENST00000560631	ABCA9	Q8IUA7	1624 aa		12.84	□□□□□ -0.35
RNF31-222	ENST00000560631	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.84	□□□□□ -0.35
RNF31-222	ENST00000560631	MAGI3	Q5TCQ9	1506 aa		12.83	□□□□□ -0.35
RNF31-222	ENST00000560631	CD109	Q6YHK3	1445 aa		12.83	□□□□□ -0.36
RNF31-222	ENST00000560631	TRO	Q12816	1431 aa	Predicted RBP	12.81	□□□□□ -0.36
RNF31-222	ENST00000560631	VPS8	Q8N3P4	1428 aa		12.81	□□□□□ -0.36
RNF31-222	ENST00000560631	TEX14	Q8IWB6	1497 aa		12.81	□□□□□ -0.36
RNF31-222	ENST00000560631	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
RNF31-222	ENST00000560631	PHLDB1	Q86UU1	1377 aa		12.78	□□□□□ -0.36
RNF31-222	ENST00000560631	MAP3K1	Q13233	1512 aa		12.76	□□□□□ -0.37
RNF31-222	ENST00000560631	KIF14	Q15058	1648 aa		12.75	□□□□□ -0.37
RNF31-222	ENST00000560631	TTC37	Q6PGP7	1564 aa		12.74	□□□□□ -0.37
RNF31-222	ENST00000560631	ARAP3	Q8WWN8	1544 aa		12.74	□□□□□ -0.37
RNF31-222	ENST00000560631	KDM6B	O15054	1643 aa		12.73	□□□□□ -0.37
RNF31-222	ENST00000560631	NEO1	Q92859	1461 aa		12.73	□□□□□ -0.37
RNF31-222	ENST00000560631	PLCH2	O75038	1416 aa		12.73	□□□□□ -0.37
RNF31-222	ENST00000560631	MYO5C	Q9NQX4	1742 aa		12.72	□□□□□ -0.37
RNF31-222	ENST00000560631	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.72	□□□□□ -0.37
RNF31-222	ENST00000560631	MTUS2	Q5JR59	1369 aa		12.71	□□□□□ -0.37
RNF31-222	ENST00000560631	TIAM1	Q13009	1591 aa		12.71	□□□□□ -0.37
RNF31-222	ENST00000560631	CFAP74	Q9C0B2	1584 aa		12.71	□□□□□ -0.37
RNF31-222	ENST00000560631	EHBP1L1	Q8N3D4	1523 aa		12.7	□□□□□ -0.38
RNF31-222	ENST00000560631	CDC42BPB	Q9Y5S2	1711 aa		12.69	□□□□□ -0.38
RNF31-222	ENST00000560631	CDC42BPA	Q5VT25	1732 aa		12.68	□□□□□ -0.38
RNF31-222	ENST00000560631	FANCA	O15360	1455 aa		12.68	□□□□□ -0.38
RNF31-222	ENST00000560631	EFCAB2	Q5VUJ9	269 aa		12.68	□□□□□ -0.38
RNF31-222	ENST00000560631	AKNA	Q7Z591	1439 aa		12.68	□□□□□ -0.38
RNF31-222	ENST00000560631	PREX2	Q70Z35	1606 aa		12.66	□□□□□ -0.38
RNF31-222	ENST00000560631	LRRC9	Q6ZRR7	1453 aa		12.66	□□□□□ -0.38
RNF31-222	ENST00000560631	APLP2	Q06481	763 aa		12.66	□□□□□ -0.38
RNF31-222	ENST00000560631	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.65	□□□□□ -0.38
RNF31-222	ENST00000560631	GPATCH8	Q9UKJ3	1502 aa	Known RBP	12.64	□□□□□ -0.39
RNF31-222	ENST00000560631	RICTOR	Q6R327	1708 aa		12.63	□□□□□ -0.39
RNF31-222	ENST00000560631	ARHGAP5	Q13017	1502 aa		12.62	□□□□□ -0.39
RNF31-222	ENST00000560631	DENND4B	O75064	1496 aa	Predicted RBP	12.62	□□□□□ -0.39
RNF31-222	ENST00000560631	CCNB3	Q8WWL7	1395 aa		12.62	□□□□□ -0.39
RNF31-222	ENST00000560631	KANK4	Q5T7N3	995 aa	Predicted RBP	12.62	□□□□□ -0.39
RNF31-222	ENST00000560631	ADGRL1	O94910	1474 aa		12.61	□□□□□ -0.39
RNF31-222	ENST00000560631	NCOA2	Q15596	1464 aa		12.61	□□□□□ -0.39
RNF31-222	ENST00000560631	SCAPER	Q9BY12	1400 aa		12.61	□□□□□ -0.39
RNF31-222	ENST00000560631	ITSN2	Q9NZM3	1697 aa		12.61	□□□□□ -0.39
RNF31-222	ENST00000560631	FRMPD1	Q5SYB0	1578 aa		12.6	□□□□□ -0.39
RNF31-222	ENST00000560631	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.6	□□□□□ -0.39
RNF31-222	ENST00000560631	RAPGEF3	O95398	923 aa		12.59	□□□□□ -0.39
RNF31-222	ENST00000560631	ZMYM4	Q5VZL5	1548 aa		12.58	□□□□□ -0.4
RNF31-222	ENST00000560631	CFDP1	Q9UEE9	299 aa	Predicted RBP	12.58	□□□□□ -0.4
RNF31-222	ENST00000560631	KIAA1107	Q9UPP5	1409 aa		12.58	□□□□□ -0.4
RNF31-222	ENST00000560631	PLEKHH2	Q8IVE3	1493 aa		12.58	□□□□□ -0.4
RNF31-222	ENST00000560631	ABCC1	P33527	1531 aa		12.57	□□□□□ -0.4
RNF31-222	ENST00000560631	SAMD9L	Q8IVG5	1584 aa		12.57	□□□□□ -0.4
RNF31-222	ENST00000560631	POGZ	Q7Z3K3	1410 aa		12.57	□□□□□ -0.4
RNF31-222	ENST00000560631	MAGI2	Q86UL8	1455 aa		12.57	□□□□□ -0.4
RNF31-222	ENST00000560631	ABCB7	O75027	752 aa		12.56	□□□□□ -0.4
RNF31-222	ENST00000560631	ZNF518A	Q6AHZ1	1483 aa		12.56	□□□□□ -0.4
RNF31-222	ENST00000560631	ARHGEF12	Q9NZN5	1544 aa		12.56	□□□□□ -0.4
RNF31-222	ENST00000560631	KDM5C	P41229	1560 aa		12.56	□□□□□ -0.4
RNF31-222	ENST00000560631	MIA2	Q96PC5	1412 aa		12.54	□□□□□ -0.4
RNF31-222	ENST00000560631	MYOM3	Q5VTT5	1437 aa		12.53	□□□□□ -0.4
RNF31-222	ENST00000560631	TRAPPC8	Q9Y2L5	1435 aa		12.53	□□□□□ -0.4
RNF31-222	ENST00000560631	MLH3	Q9UHC1	1453 aa		12.53	□□□□□ -0.4
RNF31-222	ENST00000560631	RSPH4A	Q5TD94	716 aa		12.52	□□□□□ -0.41
RNF31-222	ENST00000560631	AFAP1	Q8N556	730 aa		12.52	□□□□□ -0.41
RNF31-222	ENST00000560631	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.52	□□□□□ -0.41
RNF31-222	ENST00000560631	MBD5	Q9P267	1494 aa		12.52	□□□□□ -0.41
RNF31-222	ENST00000560631	ARHGEF40	Q8TER5	1519 aa		12.52	□□□□□ -0.41
RNF31-222	ENST00000560631	SYCP2	Q9BX26	1530 aa		12.52	□□□□□ -0.41
RNF31-222	ENST00000560631	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
RNF31-222	ENST00000560631	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.51	□□□□□ -0.41
RNF31-222	ENST00000560631	ZNF644	Q9H582	1327 aa	Predicted RBP	12.5	□□□□□ -0.41
RNF31-222	ENST00000560631	ZFYVE16	Q7Z3T8	1539 aa		12.5	□□□□□ -0.41
RNF31-222	ENST00000560631	KIDINS220	Q9ULH0	1771 aa		12.49	□□□□□ -0.41
RNF31-222	ENST00000560631	HECW2	Q9P2P5	1572 aa		12.49	□□□□□ -0.41
RNF31-222	ENST00000560631	CAMSAP2	Q08AD1	1489 aa		12.49	□□□□□ -0.41
RNF31-222	ENST00000560631	ARHGEF5	Q12774	1597 aa		12.48	□□□□□ -0.41
RNF31-222	ENST00000560631	YEATS2	Q9ULM3	1422 aa		12.48	□□□□□ -0.41
RNF31-222	ENST00000560631	ATP10A	O60312	1499 aa		12.47	□□□□□ -0.41
RNF31-222	ENST00000560631	RERE	Q9P2R6	1566 aa		12.47	□□□□□ -0.41
RNF31-222	ENST00000560631	TCOF1	Q13428	1488 aa	Known RBP	12.46	□□□□□ -0.41
RNF31-222	ENST00000560631	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.46	□□□□□ -0.41
RNF31-222	ENST00000560631	FGD6	Q6ZV73	1430 aa		12.46	□□□□□ -0.41
RNF31-222	ENST00000560631	SPAG9	O60271	1321 aa	Known RBP	12.46	□□□□□ -0.41
RNF31-222	ENST00000560631	PTPN23	Q9H3S7	1636 aa		12.46	□□□□□ -0.41
RNF31-222	ENST00000560631	CCDC141	Q6ZP82	1450 aa		12.46	□□□□□ -0.42
RNF31-222	ENST00000560631	C9orf84	Q5VXU9	1444 aa		12.45	□□□□□ -0.42
RNF31-222	ENST00000560631	INO80	Q9ULG1	1556 aa	Predicted RBP	12.44	□□□□□ -0.42
RNF31-222	ENST00000560631	DIP2C	Q9Y2E4	1556 aa		12.44	□□□□□ -0.42
RNF31-222	ENST00000560631	KDM4F	A0A1W2PPD8	638 aa		12.44	□□□□□ -0.42
RNF31-222	ENST00000560631	ABCA6	Q8N139	1617 aa		12.44	□□□□□ -0.42
RNF31-222	ENST00000560631	ATP7A	Q04656	1500 aa		12.43	□□□□□ -0.42
RNF31-222	ENST00000560631	BCORL1	Q5H9F3	1711 aa		12.42	□□□□□ -0.42
RNF31-222	ENST00000560631	MAST1	Q9Y2H9	1570 aa		12.42	□□□□□ -0.42
RNF31-222	ENST00000560631	SIGLEC1	Q9BZZ2	1709 aa		12.42	□□□□□ -0.42
RNF31-222	ENST00000560631	AGL	P35573	1532 aa		12.42	□□□□□ -0.42
RNF31-222	ENST00000560631	TSPY4	P0CV99	314 aa		12.41	□□□□□ -0.42
RNF31-222	ENST00000560631	TSPY10	P0CW01	314 aa		12.41	□□□□□ -0.42
RNF31-222	ENST00000560631	ADAMTSL3	P82987	1691 aa		12.41	□□□□□ -0.42
RNF31-222	ENST00000560631	MYT1L	Q9UL68	1186 aa		12.4	□□□□□ -0.42
RNF31-222	ENST00000560631	ADGB	Q8N7X0	1667 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms