RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
CCDC33-209ENST00000560565 TIAM1Q13009 1591 aa12.57□□□□□ -0.4
CCDC33-209ENST00000560565 HECW1Q76N89 1606 aa12.56□□□□□ -0.4
CCDC33-209ENST00000560565 LRRIQ1Q96JM4 1722 aa12.56□□□□□ -0.4
CCDC33-209ENST00000560565 MAGI3Q5TCQ9 1506 aa12.54□□□□□ -0.4
CCDC33-209ENST00000560565 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
CCDC33-209ENST00000560565 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
CCDC33-209ENST00000560565 ABCA9Q8IUA7 1624 aa12.52□□□□□ -0.4
CCDC33-209ENST00000560565 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.41
CCDC33-209ENST00000560565 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.41
CCDC33-209ENST00000560565 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
CCDC33-209ENST00000560565 PHLDB1Q86UU1 1377 aa12.47□□□□□ -0.41
CCDC33-209ENST00000560565 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
CCDC33-209ENST00000560565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC33-209ENST00000560565 EHBP1L1Q8N3D4 1523 aa12.44□□□□□ -0.42
CCDC33-209ENST00000560565 ARAP3Q8WWN8 1544 aa12.44□□□□□ -0.42
CCDC33-209ENST00000560565 NEO1Q92859 1461 aa12.44□□□□□ -0.42
CCDC33-209ENST00000560565 TROQ12816 1431 aaPredicted RBP12.43□□□□□ -0.42
CCDC33-209ENST00000560565 TTC37Q6PGP7 1564 aa12.43□□□□□ -0.42
CCDC33-209ENST00000560565 RAPGEF3O95398 923 aa12.41□□□□□ -0.42
CCDC33-209ENST00000560565 FANCAO15360 1455 aa12.4□□□□□ -0.42
CCDC33-209ENST00000560565 AKNAQ7Z591 1439 aa12.4□□□□□ -0.42
CCDC33-209ENST00000560565 KIF14Q15058 1648 aa12.4□□□□□ -0.42
CCDC33-209ENST00000560565 CFAP74Q9C0B2 1584 aa12.39□□□□□ -0.43
CCDC33-209ENST00000560565 PLCH2O75038 1416 aa12.39□□□□□ -0.43
CCDC33-209ENST00000560565 MYO5CQ9NQX4 1742 aa12.38□□□□□ -0.43
CCDC33-209ENST00000560565 KANK4Q5T7N3 995 aaPredicted RBP12.38□□□□□ -0.43
CCDC33-209ENST00000560565 EFCAB2Q5VUJ9 269 aa12.38□□□□□ -0.43
CCDC33-209ENST00000560565 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
CCDC33-209ENST00000560565 MTUS2Q5JR59 1369 aa12.37□□□□□ -0.43
CCDC33-209ENST00000560565 DENND4BO75064 1496 aaPredicted RBP12.36□□□□□ -0.43
CCDC33-209ENST00000560565 ITSN2Q9NZM3 1697 aa12.35□□□□□ -0.43
CCDC33-209ENST00000560565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC33-209ENST00000560565 ARHGAP5Q13017 1502 aa12.33□□□□□ -0.44
CCDC33-209ENST00000560565 SCAPERQ9BY12 1400 aa12.33□□□□□ -0.44
CCDC33-209ENST00000560565 RICTORQ6R327 1708 aa12.33□□□□□ -0.44
CCDC33-209ENST00000560565 FRMPD1Q5SYB0 1578 aa12.32□□□□□ -0.44
CCDC33-209ENST00000560565 NCOA2Q15596 1464 aa12.32□□□□□ -0.44
CCDC33-209ENST00000560565 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
CCDC33-209ENST00000560565 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
CCDC33-209ENST00000560565 PREX2Q70Z35 1606 aa12.29□□□□□ -0.44
CCDC33-209ENST00000560565 CDC42BPAQ5VT25 1732 aa12.29□□□□□ -0.44
CCDC33-209ENST00000560565 POGZQ7Z3K3 1410 aa12.28□□□□□ -0.44
CCDC33-209ENST00000560565 PTPRMP28827 1452 aa12.28□□□□□ -0.44
CCDC33-209ENST00000560565 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
CCDC33-209ENST00000560565 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
CCDC33-209ENST00000560565 MYOM3Q5VTT5 1437 aa12.28□□□□□ -0.44
CCDC33-209ENST00000560565 MED1Q15648 1581 aaPredicted RBP12.27□□□□□ -0.44
CCDC33-209ENST00000560565 HSPA2P54652 639 aa12.27□□□□□ -0.45
CCDC33-209ENST00000560565 AFAP1Q8N556 730 aa12.27□□□□□ -0.45
CCDC33-209ENST00000560565 MIA2Q96PC5 1412 aa12.27□□□□□ -0.45
CCDC33-209ENST00000560565 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.45
CCDC33-209ENST00000560565 ZMYM4Q5VZL5 1548 aa12.27□□□□□ -0.45
CCDC33-209ENST00000560565 GPATCH8Q9UKJ3 1502 aaKnown RBP12.27□□□□□ -0.45
CCDC33-209ENST00000560565 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
CCDC33-209ENST00000560565 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
CCDC33-209ENST00000560565 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
CCDC33-209ENST00000560565 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
CCDC33-209ENST00000560565 ZNF518AQ6AHZ1 1483 aa12.26□□□□□ -0.45
CCDC33-209ENST00000560565 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
CCDC33-209ENST00000560565 ARHGEF40Q8TER5 1519 aa12.25□□□□□ -0.45
CCDC33-209ENST00000560565 TCOF1Q13428 1488 aaKnown RBP12.24□□□□□ -0.45
CCDC33-209ENST00000560565 YEATS2Q9ULM3 1422 aa12.24□□□□□ -0.45
CCDC33-209ENST00000560565 ABCC1P33527 1531 aa12.22□□□□□ -0.45
CCDC33-209ENST00000560565 ARHGEF12Q9NZN5 1544 aa12.22□□□□□ -0.45
CCDC33-209ENST00000560565 MIER1Q8N108 512 aa12.22□□□□□ -0.45
CCDC33-209ENST00000560565 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.45
CCDC33-209ENST00000560565 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC33-209ENST00000560565 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
CCDC33-209ENST00000560565 KDM5CP41229 1560 aa12.21□□□□□ -0.46
CCDC33-209ENST00000560565 SAMD9LQ8IVG5 1584 aa12.21□□□□□ -0.46
CCDC33-209ENST00000560565 ATP10AO60312 1499 aa12.21□□□□□ -0.46
CCDC33-209ENST00000560565 PLEKHH2Q8IVE3 1493 aa12.2□□□□□ -0.46
CCDC33-209ENST00000560565 BCORL1Q5H9F3 1711 aa12.2□□□□□ -0.46
CCDC33-209ENST00000560565 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
CCDC33-209ENST00000560565 SRCAPQ6ZRS2 3230 aa12.19□□□□□ -0.46
CCDC33-209ENST00000560565 MLH3Q9UHC1 1453 aa12.19□□□□□ -0.46
CCDC33-209ENST00000560565 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
CCDC33-209ENST00000560565 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
CCDC33-209ENST00000560565 SYCP2Q9BX26 1530 aa12.18□□□□□ -0.46
CCDC33-209ENST00000560565 MLECQ14165 292 aa12.18□□□□□ -0.46
CCDC33-209ENST00000560565 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
CCDC33-209ENST00000560565 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
CCDC33-209ENST00000560565 C9orf84Q5VXU9 1444 aa12.18□□□□□ -0.46
CCDC33-209ENST00000560565 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
CCDC33-209ENST00000560565 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
CCDC33-209ENST00000560565 CROCC2H7BZ55 1655 aa12.16□□□□□ -0.46
CCDC33-209ENST00000560565 SIGLEC1Q9BZZ2 1709 aa12.16□□□□□ -0.46
CCDC33-209ENST00000560565 ADGBQ8N7X0 1667 aa12.16□□□□□ -0.46
CCDC33-209ENST00000560565 KIDINS220Q9ULH0 1771 aa12.15□□□□□ -0.46
CCDC33-209ENST00000560565 GCC2Q8IWJ2 1684 aa12.15□□□□□ -0.46
CCDC33-209ENST00000560565 MADDQ8WXG6 1647 aa12.15□□□□□ -0.47
CCDC33-209ENST00000560565 DIP2CQ9Y2E4 1556 aa12.14□□□□□ -0.47
CCDC33-209ENST00000560565 ABCA6Q8N139 1617 aa12.14□□□□□ -0.47
CCDC33-209ENST00000560565 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
CCDC33-209ENST00000560565 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
CCDC33-209ENST00000560565 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
CCDC33-209ENST00000560565 CAMSAP2Q08AD1 1489 aa12.12□□□□□ -0.47
CCDC33-209ENST00000560565 MBD5Q9P267 1494 aa12.12□□□□□ -0.47
CCDC33-209ENST00000560565 ARHGEF5Q12774 1597 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms