RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
ACTC1-203ENST00000560563 PTPRGP23470 1445 aa13.16□□□□□ -0.3
ACTC1-203ENST00000560563 FMN1Q68DA7 1419 aa13.16□□□□□ -0.3
ACTC1-203ENST00000560563 MNX1P50219 401 aaPredicted RBP13.16□□□□□ -0.3
ACTC1-203ENST00000560563 ARHGEF11O15085 1522 aa13.16□□□□□ -0.3
ACTC1-203ENST00000560563 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
ACTC1-203ENST00000560563 VPS8Q8N3P4 1428 aa13.14□□□□□ -0.31
ACTC1-203ENST00000560563 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
ACTC1-203ENST00000560563 MIER1Q8N108 512 aa13.13□□□□□ -0.31
ACTC1-203ENST00000560563 RIMBP3CA6NJZ7 1639 aa13.11□□□□□ -0.31
ACTC1-203ENST00000560563 RIMBP3BA6NNM3 1639 aa13.11□□□□□ -0.31
ACTC1-203ENST00000560563 RIMBP3Q9UFD9 1639 aa13.11□□□□□ -0.31
ACTC1-203ENST00000560563 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
ACTC1-203ENST00000560563 CASKIN1Q8WXD9 1431 aa13.1□□□□□ -0.31
ACTC1-203ENST00000560563 PLB1Q6P1J6 1458 aa13.1□□□□□ -0.31
ACTC1-203ENST00000560563 ABCA8O94911 1581 aa13.08□□□□□ -0.32
ACTC1-203ENST00000560563 UACAQ9BZF9 1416 aa13.08□□□□□ -0.32
ACTC1-203ENST00000560563 DNAJC5Q9H3Z4 198 aa13.08□□□□□ -0.32
ACTC1-203ENST00000560563 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
ACTC1-203ENST00000560563 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
ACTC1-203ENST00000560563 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
ACTC1-203ENST00000560563 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
ACTC1-203ENST00000560563 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
ACTC1-203ENST00000560563 RAPGEF6Q8TEU7 1601 aa13.06□□□□□ -0.32
ACTC1-203ENST00000560563 CYB5RLQ6IPT4 315 aa13.05□□□□□ -0.32
ACTC1-203ENST00000560563 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
ACTC1-203ENST00000560563 NUP153P49790 1475 aaKnown RBP13.04□□□□□ -0.32
ACTC1-203ENST00000560563 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
ACTC1-203ENST00000560563 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
ACTC1-203ENST00000560563 HECW1Q76N89 1606 aa13.03□□□□□ -0.32
ACTC1-203ENST00000560563 CLCN6P51797 869 aa13.03□□□□□ -0.32
ACTC1-203ENST00000560563 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
ACTC1-203ENST00000560563 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.33
ACTC1-203ENST00000560563 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
ACTC1-203ENST00000560563 EPRSP07814 1512 aaKnown RBP13.01□□□□□ -0.33
ACTC1-203ENST00000560563 ADCY10Q96PN6 1610 aa13□□□□□ -0.33
ACTC1-203ENST00000560563 ATP10BO94823 1461 aa13□□□□□ -0.33
ACTC1-203ENST00000560563 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
ACTC1-203ENST00000560563 ARID3CA6NKF2 412 aa13□□□□□ -0.33
ACTC1-203ENST00000560563 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
ACTC1-203ENST00000560563 MAP3K1Q13233 1512 aa12.99□□□□□ -0.33
ACTC1-203ENST00000560563 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
ACTC1-203ENST00000560563 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
ACTC1-203ENST00000560563 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
ACTC1-203ENST00000560563 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
ACTC1-203ENST00000560563 CFAP43Q8NDM7 1665 aa12.94□□□□□ -0.34
ACTC1-203ENST00000560563 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
ACTC1-203ENST00000560563 CDK11AQ9UQ88 783 aaPredicted RBP12.94□□□□□ -0.34
ACTC1-203ENST00000560563 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
ACTC1-203ENST00000560563 LRRC9Q6ZRR7 1453 aa12.92□□□□□ -0.34
ACTC1-203ENST00000560563 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
ACTC1-203ENST00000560563 MTUS2Q5JR59 1369 aa12.91□□□□□ -0.34
ACTC1-203ENST00000560563 MAGI3Q5TCQ9 1506 aa12.9□□□□□ -0.34
ACTC1-203ENST00000560563 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
ACTC1-203ENST00000560563 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
ACTC1-203ENST00000560563 LHX8Q68G74 356 aa12.89□□□□□ -0.35
ACTC1-203ENST00000560563 RASEFQ8IZ41 740 aa12.89□□□□□ -0.35
ACTC1-203ENST00000560563 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
ACTC1-203ENST00000560563 ASXL2Q76L83 1435 aa12.88□□□□□ -0.35
ACTC1-203ENST00000560563 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
ACTC1-203ENST00000560563 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
ACTC1-203ENST00000560563 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
ACTC1-203ENST00000560563 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
ACTC1-203ENST00000560563 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
ACTC1-203ENST00000560563 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
ACTC1-203ENST00000560563 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
ACTC1-203ENST00000560563 NCOA2Q15596 1464 aa12.82□□□□□ -0.36
ACTC1-203ENST00000560563 KIF14Q15058 1648 aa12.81□□□□□ -0.36
ACTC1-203ENST00000560563 SUPT6HQ7KZ85 1726 aaKnown RBP12.81□□□□□ -0.36
ACTC1-203ENST00000560563 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
ACTC1-203ENST00000560563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.36
ACTC1-203ENST00000560563 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
ACTC1-203ENST00000560563 PHLDB1Q86UU1 1377 aa12.78□□□□□ -0.36
ACTC1-203ENST00000560563 NUBP1P53384 320 aa12.77□□□□□ -0.37
ACTC1-203ENST00000560563 CCNB3Q8WWL7 1395 aa12.76□□□□□ -0.37
ACTC1-203ENST00000560563 GPATCH8Q9UKJ3 1502 aaKnown RBP12.76□□□□□ -0.37
ACTC1-203ENST00000560563 MAP3K13O43283 966 aa12.75□□□□□ -0.37
ACTC1-203ENST00000560563 GLI2P10070 1586 aa12.75□□□□□ -0.37
ACTC1-203ENST00000560563 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
ACTC1-203ENST00000560563 TTC37Q6PGP7 1564 aa12.75□□□□□ -0.37
ACTC1-203ENST00000560563 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
ACTC1-203ENST00000560563 FAM69CQ0P6D2 419 aa12.74□□□□□ -0.37
ACTC1-203ENST00000560563 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
ACTC1-203ENST00000560563 DIP2BQ9P265 1576 aa12.73□□□□□ -0.37
ACTC1-203ENST00000560563 PLCH2O75038 1416 aa12.73□□□□□ -0.37
ACTC1-203ENST00000560563 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
ACTC1-203ENST00000560563 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
ACTC1-203ENST00000560563 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
ACTC1-203ENST00000560563 CD109Q6YHK3 1445 aa12.71□□□□□ -0.37
ACTC1-203ENST00000560563 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.37
ACTC1-203ENST00000560563 RRBP1Q9P2E9 1410 aaKnown RBP12.71□□□□□ -0.37
ACTC1-203ENST00000560563 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.37
ACTC1-203ENST00000560563 FAM212AQ96EL1 285 aa12.71□□□□□ -0.37
ACTC1-203ENST00000560563 CDC42BPAQ5VT25 1732 aa12.71□□□□□ -0.38
ACTC1-203ENST00000560563 ARAP3Q8WWN8 1544 aa12.7□□□□□ -0.38
ACTC1-203ENST00000560563 ITSN2Q9NZM3 1697 aa12.7□□□□□ -0.38
ACTC1-203ENST00000560563 PREX2Q70Z35 1606 aa12.7□□□□□ -0.38
ACTC1-203ENST00000560563 MYO5CQ9NQX4 1742 aa12.69□□□□□ -0.38
ACTC1-203ENST00000560563 ATMINO43313 823 aaPredicted RBP12.69□□□□□ -0.38
ACTC1-203ENST00000560563 EFCAB2Q5VUJ9 269 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms