RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, humanhuman

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-223ENST00000560532 RNF166Q96A37 237 aaPredicted RBP13.39□□□□□ -0.27
SLTM-223ENST00000560532 ZSWIM6Q9HCJ5 1215 aa13.38□□□□□ -0.27
SLTM-223ENST00000560532 GPR153Q6NV75 609 aa13.37□□□□□ -0.27
SLTM-223ENST00000560532 ZNF687Q8N1G0 1237 aa13.34□□□□□ -0.27
SLTM-223ENST00000560532 ARSIQ5FYB1 569 aa13.32□□□□□ -0.28
SLTM-223ENST00000560532 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
SLTM-223ENST00000560532 NLRP6P59044 892 aa13.29□□□□□ -0.28
SLTM-223ENST00000560532 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLTM-223ENST00000560532 BCL11BQ9C0K0 894 aaPredicted RBP13.29□□□□□ -0.28
SLTM-223ENST00000560532 STK24Q9Y6E0 443 aa13.26□□□□□ -0.29
SLTM-223ENST00000560532 FBXO22Q8NEZ5 403 aa13.25□□□□□ -0.29
SLTM-223ENST00000560532 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
SLTM-223ENST00000560532 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
SLTM-223ENST00000560532 MFRPQ9BY79 579 aa13.2□□□□□ -0.3
SLTM-223ENST00000560532 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
SLTM-223ENST00000560532 STK25O00506 426 aa13.17□□□□□ -0.3
SLTM-223ENST00000560532 PTGER2P43116 358 aa13.17□□□□□ -0.3
SLTM-223ENST00000560532 C2orf72A6NCS6 295 aa13.16□□□□□ -0.3
SLTM-223ENST00000560532 NUDT7P0C024 238 aa13.15□□□□□ -0.3
SLTM-223ENST00000560532 LSM11P83369 360 aaKnown RBP eCLIP13.14□□□□□ -0.31
SLTM-223ENST00000560532 KIF3CO14782 793 aa13.13□□□□□ -0.31
SLTM-223ENST00000560532 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
SLTM-223ENST00000560532 LHX6Q9UPM6 363 aa13.08□□□□□ -0.32
SLTM-223ENST00000560532 AXIN2Q9Y2T1 843 aa13.07□□□□□ -0.32
SLTM-223ENST00000560532 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
SLTM-223ENST00000560532 TMC2Q8TDI7 906 aa13.04□□□□□ -0.32
SLTM-223ENST00000560532 PBX2P40425 430 aa13.03□□□□□ -0.32
SLTM-223ENST00000560532 POTEEQ6S8J3 1075 aa13.03□□□□□ -0.32
SLTM-223ENST00000560532 RGL2O15211 777 aa13.01□□□□□ -0.33
SLTM-223ENST00000560532 SLC34A2O95436 690 aa13□□□□□ -0.33
SLTM-223ENST00000560532 PPP1R37O75864 691 aa12.96□□□□□ -0.33
SLTM-223ENST00000560532 PKD2Q13563 968 aa12.94□□□□□ -0.34
SLTM-223ENST00000560532 ADGRD1Q6QNK2 874 aa12.9□□□□□ -0.34
SLTM-223ENST00000560532 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
SLTM-223ENST00000560532 PLA2G2EQ9NZK7 142 aa12.89□□□□□ -0.35
SLTM-223ENST00000560532 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
SLTM-223ENST00000560532 HCSTQ9UBK5 93 aa12.86□□□□□ -0.35
SLTM-223ENST00000560532 PSEN2P49810 448 aa12.84□□□□□ -0.35
SLTM-223ENST00000560532 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
SLTM-223ENST00000560532 PTCD2Q8WV60 388 aaKnown RBP12.83□□□□□ -0.36
SLTM-223ENST00000560532 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
SLTM-223ENST00000560532 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
SLTM-223ENST00000560532 FOXK1P85037 733 aa12.79□□□□□ -0.36
SLTM-223ENST00000560532 TK2O00142 265 aa12.77□□□□□ -0.37
SLTM-223ENST00000560532 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.37
SLTM-223ENST00000560532 HRO43593 1189 aa12.76□□□□□ -0.37
SLTM-223ENST00000560532 DSG2Q14126 1118 aa12.76□□□□□ -0.37
SLTM-223ENST00000560532 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
SLTM-223ENST00000560532 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
SLTM-223ENST00000560532 TBC1D12O60347 775 aa12.72□□□□□ -0.37
SLTM-223ENST00000560532 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
SLTM-223ENST00000560532 KCNK17Q96T54 332 aa12.72□□□□□ -0.37
SLTM-223ENST00000560532 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
SLTM-223ENST00000560532 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
SLTM-223ENST00000560532 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
SLTM-223ENST00000560532 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
SLTM-223ENST00000560532 ZNF454Q8N9F8 522 aa12.63□□□□□ -0.39
SLTM-223ENST00000560532 PTPN5P54829 565 aa12.62□□□□□ -0.39
SLTM-223ENST00000560532 VPS9D1Q9Y2B5 631 aa12.62□□□□□ -0.39
SLTM-223ENST00000560532 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
SLTM-223ENST00000560532 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
SLTM-223ENST00000560532 PPP1R15BQ5SWA1 713 aa12.55□□□□□ -0.4
SLTM-223ENST00000560532 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
SLTM-223ENST00000560532 CRISPLD2Q9H0B8 497 aa12.54□□□□□ -0.4
SLTM-223ENST00000560532 PTPREP23469 700 aa12.51□□□□□ -0.41
SLTM-223ENST00000560532 FOSBP53539 338 aa12.51□□□□□ -0.41
SLTM-223ENST00000560532 THSD4Q6ZMP0 1018 aa12.5□□□□□ -0.41
SLTM-223ENST00000560532 SLC4A5Q9BY07 1137 aa12.5□□□□□ -0.41
SLTM-223ENST00000560532 GOLGA8CPA6NN73 597 aa12.49□□□□□ -0.41
SLTM-223ENST00000560532 ZBED2Q9BTP6 218 aa12.48□□□□□ -0.41
SLTM-223ENST00000560532 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
SLTM-223ENST00000560532 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
SLTM-223ENST00000560532 WNT2BQ93097 391 aa12.47□□□□□ -0.41
SLTM-223ENST00000560532 RYDENQ9NUL5 291 aaKnown RBP12.47□□□□□ -0.41
SLTM-223ENST00000560532 MRPL50Q8N5N7 158 aaKnown RBP12.46□□□□□ -0.41
SLTM-223ENST00000560532 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
SLTM-223ENST00000560532 EVI5O60447 810 aa12.45□□□□□ -0.42
SLTM-223ENST00000560532 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
SLTM-223ENST00000560532 PDE4AP27815 886 aa12.44□□□□□ -0.42
SLTM-223ENST00000560532 ADAM33Q9BZ11 813 aa12.44□□□□□ -0.42
SLTM-223ENST00000560532 ZDHHC16Q969W1 377 aa12.43□□□□□ -0.42
SLTM-223ENST00000560532 ANO8Q9HCE9 1232 aaPredicted RBP12.41□□□□□ -0.42
SLTM-223ENST00000560532 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
SLTM-223ENST00000560532 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
SLTM-223ENST00000560532 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
SLTM-223ENST00000560532 A0A0G2JS52 829 aa12.38□□□□□ -0.43
SLTM-223ENST00000560532 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
SLTM-223ENST00000560532 RGS20O76081 388 aa12.36□□□□□ -0.43
SLTM-223ENST00000560532 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
SLTM-223ENST00000560532 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
SLTM-223ENST00000560532 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
SLTM-223ENST00000560532 PPP1R3GB7ZBB8 358 aa12.31□□□□□ -0.44
SLTM-223ENST00000560532 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
SLTM-223ENST00000560532 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
SLTM-223ENST00000560532 PCDHGA10Q9Y5H3 936 aa12.3□□□□□ -0.44
SLTM-223ENST00000560532 COL9A1P20849 921 aa12.29□□□□□ -0.44
SLTM-223ENST00000560532 ANKK1Q8NFD2 765 aa12.29□□□□□ -0.44
SLTM-223ENST00000560532 MFSD10Q14728 455 aa12.28□□□□□ -0.44
SLTM-223ENST00000560532 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
SLTM-223ENST00000560532 BCAMP50895 628 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms