RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
LRRC28-219ENST00000560483 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
LRRC28-219ENST00000560483 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
LRRC28-219ENST00000560483 ARID3CA6NKF2 412 aa12.97□□□□□ -0.33
LRRC28-219ENST00000560483 UACAQ9BZF9 1416 aa12.96□□□□□ -0.33
LRRC28-219ENST00000560483 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
LRRC28-219ENST00000560483 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
LRRC28-219ENST00000560483 ATP1B4Q9UN42 357 aaPredicted RBP12.94□□□□□ -0.34
LRRC28-219ENST00000560483 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
LRRC28-219ENST00000560483 FAM69CQ0P6D2 419 aa12.93□□□□□ -0.34
LRRC28-219ENST00000560483 FHOD3Q2V2M9 1422 aa12.93□□□□□ -0.34
LRRC28-219ENST00000560483 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
LRRC28-219ENST00000560483 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
LRRC28-219ENST00000560483 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
LRRC28-219ENST00000560483 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
LRRC28-219ENST00000560483 EFCAB5A4FU69 1503 aa12.89□□□□□ -0.35
LRRC28-219ENST00000560483 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
LRRC28-219ENST00000560483 UHRF1BP1LA0JNW5 1464 aa12.89□□□□□ -0.35
LRRC28-219ENST00000560483 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
LRRC28-219ENST00000560483 MAPKBP1O60336 1514 aa12.88□□□□□ -0.35
LRRC28-219ENST00000560483 ASXL2Q76L83 1435 aa12.87□□□□□ -0.35
LRRC28-219ENST00000560483 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
LRRC28-219ENST00000560483 TSPOAP1O95153 1857 aa12.86□□□□□ -0.35
LRRC28-219ENST00000560483 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
LRRC28-219ENST00000560483 RAPGEF6Q8TEU7 1601 aa12.85□□□□□ -0.35
LRRC28-219ENST00000560483 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
LRRC28-219ENST00000560483 ABCA8O94911 1581 aa12.85□□□□□ -0.35
LRRC28-219ENST00000560483 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
LRRC28-219ENST00000560483 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
LRRC28-219ENST00000560483 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.35
LRRC28-219ENST00000560483 CLCN6P51797 869 aa12.83□□□□□ -0.36
LRRC28-219ENST00000560483 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
LRRC28-219ENST00000560483 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
LRRC28-219ENST00000560483 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
LRRC28-219ENST00000560483 FMN1Q68DA7 1419 aa12.81□□□□□ -0.36
LRRC28-219ENST00000560483 ARHGAP35Q9NRY4 1499 aa12.81□□□□□ -0.36
LRRC28-219ENST00000560483 CLIP1P30622 1438 aa12.8□□□□□ -0.36
LRRC28-219ENST00000560483 WDR7Q9Y4E6 1490 aa12.79□□□□□ -0.36
LRRC28-219ENST00000560483 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.37
LRRC28-219ENST00000560483 ATP10BO94823 1461 aa12.77□□□□□ -0.37
LRRC28-219ENST00000560483 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
LRRC28-219ENST00000560483 EPRSP07814 1512 aaKnown RBP12.76□□□□□ -0.37
LRRC28-219ENST00000560483 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
LRRC28-219ENST00000560483 PLSCR2Q9NRY7 297 aa12.75□□□□□ -0.37
LRRC28-219ENST00000560483 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
LRRC28-219ENST00000560483 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
LRRC28-219ENST00000560483 CDK11AQ9UQ88 783 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-219ENST00000560483 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
LRRC28-219ENST00000560483 GLI2P10070 1586 aa12.72□□□□□ -0.37
LRRC28-219ENST00000560483 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
LRRC28-219ENST00000560483 CD109Q6YHK3 1445 aa12.71□□□□□ -0.38
LRRC28-219ENST00000560483 PCF11O94913 1555 aaKnown RBP12.7□□□□□ -0.38
LRRC28-219ENST00000560483 TEX14Q8IWB6 1497 aa12.7□□□□□ -0.38
LRRC28-219ENST00000560483 KDM6BO15054 1643 aa12.69□□□□□ -0.38
LRRC28-219ENST00000560483 CFAP43Q8NDM7 1665 aa12.68□□□□□ -0.38
LRRC28-219ENST00000560483 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-219ENST00000560483 MAP3K4Q9Y6R4 1608 aa12.68□□□□□ -0.38
LRRC28-219ENST00000560483 CASKIN1Q8WXD9 1431 aa12.67□□□□□ -0.38
LRRC28-219ENST00000560483 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
LRRC28-219ENST00000560483 FYCO1Q9BQS8 1478 aa12.65□□□□□ -0.38
LRRC28-219ENST00000560483 PPRC1Q5VV67 1664 aaKnown RBP12.64□□□□□ -0.39
LRRC28-219ENST00000560483 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
LRRC28-219ENST00000560483 LRRIQ1Q96JM4 1722 aa12.62□□□□□ -0.39
LRRC28-219ENST00000560483 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-219ENST00000560483 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-219ENST00000560483 PROM2Q8N271 834 aa12.62□□□□□ -0.39
LRRC28-219ENST00000560483 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
LRRC28-219ENST00000560483 KIF14Q15058 1648 aa12.62□□□□□ -0.39
LRRC28-219ENST00000560483 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
LRRC28-219ENST00000560483 TRPC6Q9Y210 931 aa12.6□□□□□ -0.39
LRRC28-219ENST00000560483 MAGI3Q5TCQ9 1506 aa12.6□□□□□ -0.39
LRRC28-219ENST00000560483 TROQ12816 1431 aaPredicted RBP12.6□□□□□ -0.39
LRRC28-219ENST00000560483 MTUS2Q5JR59 1369 aa12.59□□□□□ -0.39
LRRC28-219ENST00000560483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.59□□□□□ -0.39
LRRC28-219ENST00000560483 TTC37Q6PGP7 1564 aa12.59□□□□□ -0.39
LRRC28-219ENST00000560483 POTEMA6NI47 508 aa12.57□□□□□ -0.4
LRRC28-219ENST00000560483 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
LRRC28-219ENST00000560483 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
LRRC28-219ENST00000560483 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
LRRC28-219ENST00000560483 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
LRRC28-219ENST00000560483 FANCAO15360 1455 aa12.56□□□□□ -0.4
LRRC28-219ENST00000560483 ZNF777Q9ULD5 760 aaPredicted RBP12.55□□□□□ -0.4
LRRC28-219ENST00000560483 ARHGAP5Q13017 1502 aa12.55□□□□□ -0.4
LRRC28-219ENST00000560483 CFAP74Q9C0B2 1584 aa12.55□□□□□ -0.4
LRRC28-219ENST00000560483 ATN1P54259 1190 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-219ENST00000560483 LCE2DQ5TA82 110 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-219ENST00000560483 EFCAB2Q5VUJ9 269 aa12.54□□□□□ -0.4
LRRC28-219ENST00000560483 NEO1Q92859 1461 aa12.53□□□□□ -0.4
LRRC28-219ENST00000560483 RAPGEF3O95398 923 aa12.53□□□□□ -0.4
LRRC28-219ENST00000560483 POTEGQ6S5H5 508 aa12.53□□□□□ -0.4
LRRC28-219ENST00000560483 PHLDB1Q86UU1 1377 aa12.53□□□□□ -0.4
LRRC28-219ENST00000560483 AKNAQ7Z591 1439 aa12.53□□□□□ -0.4
LRRC28-219ENST00000560483 POTEFA5A3E0 1075 aa12.52□□□□□ -0.41
LRRC28-219ENST00000560483 PLCH2O75038 1416 aa12.52□□□□□ -0.41
LRRC28-219ENST00000560483 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-219ENST00000560483 CCNB3Q8WWL7 1395 aa12.51□□□□□ -0.41
LRRC28-219ENST00000560483 ADGRL1O94910 1474 aa12.51□□□□□ -0.41
LRRC28-219ENST00000560483 DENND4BO75064 1496 aaPredicted RBP12.5□□□□□ -0.41
LRRC28-219ENST00000560483 EHBP1L1Q8N3D4 1523 aa12.5□□□□□ -0.41
LRRC28-219ENST00000560483 ARAP3Q8WWN8 1544 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms