RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 MIA2Q96PC5 1412 aa15.91■□□□□ 0.14
CRTC3-209ENST00000560320 ITGAEP38570 1179 aa15.9■□□□□ 0.14
CRTC3-209ENST00000560320 HRCP23327 699 aa15.89■□□□□ 0.13
CRTC3-209ENST00000560320 PPRC1Q5VV67 1664 aaKnown RBP15.89■□□□□ 0.13
CRTC3-209ENST00000560320 DISP3Q9P2K9 1392 aa15.88■□□□□ 0.13
CRTC3-209ENST00000560320 ZEB1P37275 1124 aaPredicted RBP15.88■□□□□ 0.13
CRTC3-209ENST00000560320 KDM5BQ9UGL1 1544 aa15.88■□□□□ 0.13
CRTC3-209ENST00000560320 TCOF1Q13428 1488 aaKnown RBP15.87■□□□□ 0.13
CRTC3-209ENST00000560320 CCER1Q8TC90 406 aaPredicted RBP15.86■□□□□ 0.13
CRTC3-209ENST00000560320 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
CRTC3-209ENST00000560320 CFDP1Q9UEE9 299 aaPredicted RBP15.82■□□□□ 0.12
CRTC3-209ENST00000560320 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
CRTC3-209ENST00000560320 GPATCH8Q9UKJ3 1502 aaKnown RBP15.81■□□□□ 0.12
CRTC3-209ENST00000560320 COL17A1Q9UMD9 1497 aaPredicted RBP15.8■□□□□ 0.12
CRTC3-209ENST00000560320 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
CRTC3-209ENST00000560320 CAMSAP2Q08AD1 1489 aa15.78■□□□□ 0.12
CRTC3-209ENST00000560320 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.12
CRTC3-209ENST00000560320 DNMT1P26358 1616 aaKnown RBP15.77■□□□□ 0.12
CRTC3-209ENST00000560320 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.11
CRTC3-209ENST00000560320 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
CRTC3-209ENST00000560320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
CRTC3-209ENST00000560320 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
CRTC3-209ENST00000560320 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
CRTC3-209ENST00000560320 WDR7Q9Y4E6 1490 aa15.75■□□□□ 0.11
CRTC3-209ENST00000560320 GLI2P10070 1586 aa15.75■□□□□ 0.11
CRTC3-209ENST00000560320 SPATA31D1Q6ZQQ2 1576 aa15.73■□□□□ 0.11
CRTC3-209ENST00000560320 ARHGAP5Q13017 1502 aa15.73■□□□□ 0.11
CRTC3-209ENST00000560320 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
CRTC3-209ENST00000560320 GCC2Q8IWJ2 1684 aa15.73■□□□□ 0.11
CRTC3-209ENST00000560320 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
CRTC3-209ENST00000560320 DAPK1P53355 1430 aa15.72■□□□□ 0.11
CRTC3-209ENST00000560320 RAB3GAP2Q9H2M9 1393 aa15.72■□□□□ 0.11
CRTC3-209ENST00000560320 HFM1A2PYH4 1435 aa15.7■□□□□ 0.1
CRTC3-209ENST00000560320 ASXL2Q76L83 1435 aa15.7■□□□□ 0.1
CRTC3-209ENST00000560320 AKNAQ7Z591 1439 aa15.7■□□□□ 0.1
CRTC3-209ENST00000560320 ZNF644Q9H582 1327 aaPredicted RBP15.69■□□□□ 0.1
CRTC3-209ENST00000560320 PLEKHH2Q8IVE3 1493 aa15.69■□□□□ 0.1
CRTC3-209ENST00000560320 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
CRTC3-209ENST00000560320 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
CRTC3-209ENST00000560320 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
CRTC3-209ENST00000560320 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
CRTC3-209ENST00000560320 ABCC5O15440 1437 aa15.68■□□□□ 0.1
CRTC3-209ENST00000560320 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
CRTC3-209ENST00000560320 SAMD9LQ8IVG5 1584 aa15.67■□□□□ 0.1
CRTC3-209ENST00000560320 ROCK1Q13464 1354 aa15.67■□□□□ 0.1
CRTC3-209ENST00000560320 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
CRTC3-209ENST00000560320 PLCH2O75038 1416 aa15.67■□□□□ 0.1
CRTC3-209ENST00000560320 RSPH4AQ5TD94 716 aa15.66■□□□□ 0.1
CRTC3-209ENST00000560320 EFCAB2Q5VUJ9 269 aa15.66■□□□□ 0.1
CRTC3-209ENST00000560320 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
CRTC3-209ENST00000560320 MAP3K4Q9Y6R4 1608 aa15.65■□□□□ 0.1
CRTC3-209ENST00000560320 NAIPQ13075 1403 aa15.65■□□□□ 0.1
CRTC3-209ENST00000560320 SHANK2Q9UPX8 1470 aa15.65■□□□□ 0.1
CRTC3-209ENST00000560320 TSPY4P0CV99 314 aa15.64■□□□□ 0.09
CRTC3-209ENST00000560320 TSPY10P0CW01 314 aa15.64■□□□□ 0.09
CRTC3-209ENST00000560320 RRP7BPQ9NSQ0 103 aa15.64■□□□□ 0.09
CRTC3-209ENST00000560320 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
CRTC3-209ENST00000560320 CCDC141Q6ZP82 1450 aa15.63■□□□□ 0.09
CRTC3-209ENST00000560320 ANKRD30AQ9BXX3 1397 aa15.62■□□□□ 0.09
CRTC3-209ENST00000560320 TEX14Q8IWB6 1497 aa15.62■□□□□ 0.09
CRTC3-209ENST00000560320 ADGRL2O95490 1459 aa15.61■□□□□ 0.09
CRTC3-209ENST00000560320 CERKQ8TCT0 537 aa15.61■□□□□ 0.09
CRTC3-209ENST00000560320 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
CRTC3-209ENST00000560320 CFAP74Q9C0B2 1584 aa15.61■□□□□ 0.09
CRTC3-209ENST00000560320 KIAA1107Q9UPP5 1409 aa15.6■□□□□ 0.09
CRTC3-209ENST00000560320 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.09
CRTC3-209ENST00000560320 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
CRTC3-209ENST00000560320 PTPRMP28827 1452 aa15.59■□□□□ 0.09
CRTC3-209ENST00000560320 ABCC1P33527 1531 aa15.58■□□□□ 0.08
CRTC3-209ENST00000560320 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.08
CRTC3-209ENST00000560320 MBD5Q9P267 1494 aa15.57■□□□□ 0.08
CRTC3-209ENST00000560320 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
CRTC3-209ENST00000560320 FANCAO15360 1455 aa15.56■□□□□ 0.08
CRTC3-209ENST00000560320 TRIM52Q96A61 297 aa15.55■□□□□ 0.08
CRTC3-209ENST00000560320 CD109Q6YHK3 1445 aa15.54■□□□□ 0.08
CRTC3-209ENST00000560320 ADAMTSL3P82987 1691 aa15.54■□□□□ 0.08
CRTC3-209ENST00000560320 PLXNC1O60486 1568 aa15.51■□□□□ 0.07
CRTC3-209ENST00000560320 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
CRTC3-209ENST00000560320 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
CRTC3-209ENST00000560320 ARHGEF12Q9NZN5 1544 aa15.48■□□□□ 0.07
CRTC3-209ENST00000560320 SCAPERQ9BY12 1400 aa15.47■□□□□ 0.07
CRTC3-209ENST00000560320 SPAG9O60271 1321 aaKnown RBP15.46■□□□□ 0.07
CRTC3-209ENST00000560320 RTEL1-TNFRSF6BF6WH68 1400 aa15.46■□□□□ 0.07
CRTC3-209ENST00000560320 TRAPPC8Q9Y2L5 1435 aa15.46■□□□□ 0.07
CRTC3-209ENST00000560320 DUOX2Q9NRD8 1548 aa15.46■□□□□ 0.07
CRTC3-209ENST00000560320 NEO1Q92859 1461 aa15.46■□□□□ 0.06
CRTC3-209ENST00000560320 MYT1LQ9UL68 1186 aa15.45■□□□□ 0.06
CRTC3-209ENST00000560320 ZNF518AQ6AHZ1 1483 aa15.43■□□□□ 0.06
CRTC3-209ENST00000560320 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
CRTC3-209ENST00000560320 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
CRTC3-209ENST00000560320 MPHOSPH9Q99550 1183 aa15.42■□□□□ 0.06
CRTC3-209ENST00000560320 MADDQ8WXG6 1647 aa15.41■□□□□ 0.06
CRTC3-209ENST00000560320 ZFYVE16Q7Z3T8 1539 aa15.41■□□□□ 0.06
CRTC3-209ENST00000560320 HSPA2P54652 639 aa15.4■□□□□ 0.06
CRTC3-209ENST00000560320 AFAP1Q8N556 730 aa15.4■□□□□ 0.06
CRTC3-209ENST00000560320 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
CRTC3-209ENST00000560320 ERBINQ96RT1 1412 aa15.4■□□□□ 0.06
CRTC3-209ENST00000560320 BCORL1Q5H9F3 1711 aa15.4■□□□□ 0.06
CRTC3-209ENST00000560320 KDM5DQ9BY66 1539 aa15.38■□□□□ 0.05
CRTC3-209ENST00000560320 NEUROD1Q13562 356 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms