RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
CLPX-206ENST00000560166 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
CLPX-206ENST00000560166 CUX2O14529 1486 aa11.29□□□□□ -0.6
CLPX-206ENST00000560166 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
CLPX-206ENST00000560166 KLHL34Q8N239 644 aa11.26□□□□□ -0.61
CLPX-206ENST00000560166 CABP2Q9NPB3 220 aa11.26□□□□□ -0.61
CLPX-206ENST00000560166 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
CLPX-206ENST00000560166 ZNF687Q8N1G0 1237 aa11.25□□□□□ -0.61
CLPX-206ENST00000560166 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
CLPX-206ENST00000560166 ERCC6Q03468 1493 aa11.24□□□□□ -0.61
CLPX-206ENST00000560166 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
CLPX-206ENST00000560166 PTGER2P43116 358 aa11.21□□□□□ -0.61
CLPX-206ENST00000560166 VASPP50552 380 aaPredicted RBP11.18□□□□□ -0.62
CLPX-206ENST00000560166 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
CLPX-206ENST00000560166 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
CLPX-206ENST00000560166 MICALL2Q8IY33 904 aa11.08□□□□□ -0.64
CLPX-206ENST00000560166 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
CLPX-206ENST00000560166 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
CLPX-206ENST00000560166 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
CLPX-206ENST00000560166 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
CLPX-206ENST00000560166 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
CLPX-206ENST00000560166 SPOCK2Q92563 424 aa11.02□□□□□ -0.65
CLPX-206ENST00000560166 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
CLPX-206ENST00000560166 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLPX-206ENST00000560166 RSF1Q96T23 1441 aaPredicted RBP10.99□□□□□ -0.65
CLPX-206ENST00000560166 SOX12O15370 315 aa10.97□□□□□ -0.65
CLPX-206ENST00000560166 NESP48681 1621 aa10.96□□□□□ -0.65
CLPX-206ENST00000560166 IFNLR1Q8IU57 520 aaPredicted RBP10.96□□□□□ -0.65
CLPX-206ENST00000560166 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
CLPX-206ENST00000560166 MS4A4AQ96JQ5 239 aa10.95□□□□□ -0.66
CLPX-206ENST00000560166 KHSRPQ92945 711 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLPX-206ENST00000560166 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
CLPX-206ENST00000560166 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
CLPX-206ENST00000560166 PBX2P40425 430 aa10.92□□□□□ -0.66
CLPX-206ENST00000560166 HCSTQ9UBK5 93 aa10.91□□□□□ -0.66
CLPX-206ENST00000560166 NCAPD3P42695 1498 aa10.91□□□□□ -0.66
CLPX-206ENST00000560166 PEG3Q9GZU2 1588 aa10.9□□□□□ -0.67
CLPX-206ENST00000560166 SMARCA2P51531 1590 aa10.89□□□□□ -0.67
CLPX-206ENST00000560166 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
CLPX-206ENST00000560166 SUPT5HO00267 1087 aaKnown RBP10.88□□□□□ -0.67
CLPX-206ENST00000560166 POTEEQ6S8J3 1075 aa10.88□□□□□ -0.67
CLPX-206ENST00000560166 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
CLPX-206ENST00000560166 ATAD2BQ9ULI0 1458 aa10.84□□□□□ -0.67
CLPX-206ENST00000560166 AXIN2Q9Y2T1 843 aa10.82□□□□□ -0.68
CLPX-206ENST00000560166 NUDT7P0C024 238 aa10.8□□□□□ -0.68
CLPX-206ENST00000560166 LHX6Q9UPM6 363 aa10.8□□□□□ -0.68
CLPX-206ENST00000560166 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
CLPX-206ENST00000560166 KIF3CO14782 793 aa10.79□□□□□ -0.68
CLPX-206ENST00000560166 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
CLPX-206ENST00000560166 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
CLPX-206ENST00000560166 ZFP91Q96JP5 570 aaPredicted RBP10.78□□□□□ -0.68
CLPX-206ENST00000560166 WIZO95785 1651 aa10.78□□□□□ -0.68
CLPX-206ENST00000560166 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
CLPX-206ENST00000560166 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
CLPX-206ENST00000560166 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
CLPX-206ENST00000560166 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
CLPX-206ENST00000560166 SLC34A2O95436 690 aa10.76□□□□□ -0.69
CLPX-206ENST00000560166 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
CLPX-206ENST00000560166 BAZ1BQ9UIG0 1483 aaKnown RBP10.75□□□□□ -0.69
CLPX-206ENST00000560166 VGFO15240 615 aaPredicted RBP10.75□□□□□ -0.69
CLPX-206ENST00000560166 NLRP6P59044 892 aa10.75□□□□□ -0.69
CLPX-206ENST00000560166 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
CLPX-206ENST00000560166 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
CLPX-206ENST00000560166 PCDHGA4Q9Y5G9 962 aa10.74□□□□□ -0.69
CLPX-206ENST00000560166 C2orf72A6NCS6 295 aa10.73□□□□□ -0.69
CLPX-206ENST00000560166 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
CLPX-206ENST00000560166 TK2O00142 265 aa10.71□□□□□ -0.69
CLPX-206ENST00000560166 HRO43593 1189 aa10.7□□□□□ -0.7
CLPX-206ENST00000560166 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
CLPX-206ENST00000560166 PSDA5PKW4 1024 aaPredicted RBP10.68□□□□□ -0.7
CLPX-206ENST00000560166 RGS20O76081 388 aa10.67□□□□□ -0.7
CLPX-206ENST00000560166 PLCB2Q00722 1185 aa10.66□□□□□ -0.7
CLPX-206ENST00000560166 KDM4FA0A1W2PPD8 638 aa10.64□□□□□ -0.71
CLPX-206ENST00000560166 WDR62O43379 1518 aa10.63□□□□□ -0.71
CLPX-206ENST00000560166 RIMBP3CA6NJZ7 1639 aa10.63□□□□□ -0.71
CLPX-206ENST00000560166 RIMBP3BA6NNM3 1639 aa10.63□□□□□ -0.71
CLPX-206ENST00000560166 RIMBP3Q9UFD9 1639 aa10.63□□□□□ -0.71
CLPX-206ENST00000560166 PKD2Q13563 968 aa10.63□□□□□ -0.71
CLPX-206ENST00000560166 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
CLPX-206ENST00000560166 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
CLPX-206ENST00000560166 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
CLPX-206ENST00000560166 KCTD12Q96CX2 325 aaKnown RBP10.61□□□□□ -0.71
CLPX-206ENST00000560166 IFFO2Q5TF58 517 aa10.6□□□□□ -0.71
CLPX-206ENST00000560166 CADPSQ9ULU8 1353 aa10.6□□□□□ -0.71
CLPX-206ENST00000560166 PSEN2P49810 448 aa10.59□□□□□ -0.71
CLPX-206ENST00000560166 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
CLPX-206ENST00000560166 TMC2Q8TDI7 906 aa10.57□□□□□ -0.72
CLPX-206ENST00000560166 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
CLPX-206ENST00000560166 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
CLPX-206ENST00000560166 CYB5RLQ6IPT4 315 aa10.56□□□□□ -0.72
CLPX-206ENST00000560166 IRX2Q9BZI1 471 aaPredicted RBP10.56□□□□□ -0.72
CLPX-206ENST00000560166 ARHGEF11O15085 1522 aa10.54□□□□□ -0.72
CLPX-206ENST00000560166 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
CLPX-206ENST00000560166 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
CLPX-206ENST00000560166 STAC3Q96MF2 364 aa10.53□□□□□ -0.72
CLPX-206ENST00000560166 STK24Q9Y6E0 443 aa10.52□□□□□ -0.73
CLPX-206ENST00000560166 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
CLPX-206ENST00000560166 CFTRP13569 1480 aa10.49□□□□□ -0.73
CLPX-206ENST00000560166 PTPN5P54829 565 aa10.49□□□□□ -0.73
CLPX-206ENST00000560166 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms