RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
AC105339.3-201ENST00000560043 POGZQ7Z3K3 1410 aa27.54■■■□□ 2
AC105339.3-201ENST00000560043 ZMYM4Q5VZL5 1548 aa27.51■■■□□ 2
AC105339.3-201ENST00000560043 CDC42BPBQ9Y5S2 1711 aa27.5■■□□□ 1.99
AC105339.3-201ENST00000560043 PREX2Q70Z35 1606 aa27.5■■□□□ 1.99
AC105339.3-201ENST00000560043 MAGI2Q86UL8 1455 aa27.5■■□□□ 1.99
AC105339.3-201ENST00000560043 VPS8Q8N3P4 1428 aa27.5■■□□□ 1.99
AC105339.3-201ENST00000560043 ARHGEF40Q8TER5 1519 aa27.47■■□□□ 1.99
AC105339.3-201ENST00000560043 ARID4BQ4LE39 1312 aaPredicted RBP27.46■■□□□ 1.99
AC105339.3-201ENST00000560043 CDC42BPAQ5VT25 1732 aa27.45■■□□□ 1.99
AC105339.3-201ENST00000560043 ZFYVE16Q7Z3T8 1539 aa27.45■■□□□ 1.98
AC105339.3-201ENST00000560043 GPATCH8Q9UKJ3 1502 aaKnown RBP27.45■■□□□ 1.98
AC105339.3-201ENST00000560043 CCNB3Q8WWL7 1395 aa27.45■■□□□ 1.98
AC105339.3-201ENST00000560043 ZNF518AQ6AHZ1 1483 aa27.44■■□□□ 1.98
AC105339.3-201ENST00000560043 EHBP1L1Q8N3D4 1523 aa27.44■■□□□ 1.98
AC105339.3-201ENST00000560043 YEATS2Q9ULM3 1422 aa27.43■■□□□ 1.98
AC105339.3-201ENST00000560043 AFAP1Q8N556 730 aa27.43■■□□□ 1.98
AC105339.3-201ENST00000560043 ZNF777Q9ULD5 760 aaPredicted RBP27.43■■□□□ 1.98
AC105339.3-201ENST00000560043 CFDP1Q9UEE9 299 aaPredicted RBP27.41■■□□□ 1.98
AC105339.3-201ENST00000560043 ABCC1P33527 1531 aa27.39■■□□□ 1.98
AC105339.3-201ENST00000560043 MYT1LQ9UL68 1186 aa27.38■■□□□ 1.97
AC105339.3-201ENST00000560043 TIAM1Q13009 1591 aa27.37■■□□□ 1.97
AC105339.3-201ENST00000560043 ARHGEF12Q9NZN5 1544 aa27.36■■□□□ 1.97
AC105339.3-201ENST00000560043 KDM5CP41229 1560 aa27.36■■□□□ 1.97
AC105339.3-201ENST00000560043 TRAPPC8Q9Y2L5 1435 aa27.35■■□□□ 1.97
AC105339.3-201ENST00000560043 ATP10AO60312 1499 aa27.34■■□□□ 1.97
AC105339.3-201ENST00000560043 ITSN2Q9NZM3 1697 aa27.33■■□□□ 1.97
AC105339.3-201ENST00000560043 SAMD9LQ8IVG5 1584 aa27.32■■□□□ 1.96
AC105339.3-201ENST00000560043 BCORL1Q5H9F3 1711 aa27.32■■□□□ 1.96
AC105339.3-201ENST00000560043 PLEKHH2Q8IVE3 1493 aa27.32■■□□□ 1.96
AC105339.3-201ENST00000560043 ADAMTSL3P82987 1691 aa27.31■■□□□ 1.96
AC105339.3-201ENST00000560043 C9orf84Q5VXU9 1444 aa27.31■■□□□ 1.96
AC105339.3-201ENST00000560043 MLH3Q9UHC1 1453 aa27.31■■□□□ 1.96
AC105339.3-201ENST00000560043 HNRNPMP52272 730 aaKnown RBP eCLIP27.3■■□□□ 1.96
AC105339.3-201ENST00000560043 KIAA1107Q9UPP5 1409 aa27.3■■□□□ 1.96
AC105339.3-201ENST00000560043 MAP3K1Q13233 1512 aa27.3■■□□□ 1.96
AC105339.3-201ENST00000560043 HECW2Q9P2P5 1572 aa27.3■■□□□ 1.96
AC105339.3-201ENST00000560043 NCOA2Q15596 1464 aa27.29■■□□□ 1.96
AC105339.3-201ENST00000560043 SUPT6HQ7KZ85 1726 aaKnown RBP27.28■■□□□ 1.96
AC105339.3-201ENST00000560043 LRRC9Q6ZRR7 1453 aa27.28■■□□□ 1.96
AC105339.3-201ENST00000560043 SYCP2Q9BX26 1530 aa27.27■■□□□ 1.96
AC105339.3-201ENST00000560043 APLP2Q06481 763 aa27.25■■□□□ 1.95
AC105339.3-201ENST00000560043 SPAG9O60271 1321 aaKnown RBP27.23■■□□□ 1.95
AC105339.3-201ENST00000560043 ZNF644Q9H582 1327 aaPredicted RBP27.23■■□□□ 1.95
AC105339.3-201ENST00000560043 MLECQ14165 292 aa27.23■■□□□ 1.95
AC105339.3-201ENST00000560043 KANK4Q5T7N3 995 aaPredicted RBP27.23■■□□□ 1.95
AC105339.3-201ENST00000560043 SIGLEC1Q9BZZ2 1709 aa27.23■■□□□ 1.95
AC105339.3-201ENST00000560043 PTPRMP28827 1452 aa27.23■■□□□ 1.95
AC105339.3-201ENST00000560043 MADDQ8WXG6 1647 aa27.22■■□□□ 1.95
AC105339.3-201ENST00000560043 DIP2CQ9Y2E4 1556 aa27.22■■□□□ 1.95
AC105339.3-201ENST00000560043 ABCA6Q8N139 1617 aa27.18■■□□□ 1.94
AC105339.3-201ENST00000560043 REREQ9P2R6 1566 aa27.17■■□□□ 1.94
AC105339.3-201ENST00000560043 KIDINS220Q9ULH0 1771 aa27.17■■□□□ 1.94
AC105339.3-201ENST00000560043 MBD5Q9P267 1494 aa27.14■■□□□ 1.94
AC105339.3-201ENST00000560043 RIMS1Q86UR5 1692 aaKnown RBP27.13■■□□□ 1.93
AC105339.3-201ENST00000560043 ATP7AQ04656 1500 aa27.11■■□□□ 1.93
AC105339.3-201ENST00000560043 CAMSAP2Q08AD1 1489 aa27.11■■□□□ 1.93
AC105339.3-201ENST00000560043 AGLP35573 1532 aa27.11■■□□□ 1.93
AC105339.3-201ENST00000560043 RSPH4AQ5TD94 716 aa27.1■■□□□ 1.93
AC105339.3-201ENST00000560043 INO80Q9ULG1 1556 aaPredicted RBP27.07■■□□□ 1.92
AC105339.3-201ENST00000560043 FER1L4A9Z1Z3 1794 aa27.06■■□□□ 1.92
AC105339.3-201ENST00000560043 MYOM3Q5VTT5 1437 aa27.06■■□□□ 1.92
AC105339.3-201ENST00000560043 PLPPR3Q6T4P5 718 aa27.05■■□□□ 1.92
AC105339.3-201ENST00000560043 RTEL1-TNFRSF6BF6WH68 1400 aa27.05■■□□□ 1.92
AC105339.3-201ENST00000560043 CCDC141Q6ZP82 1450 aa27.05■■□□□ 1.92
AC105339.3-201ENST00000560043 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
AC105339.3-201ENST00000560043 A2MP01023 1474 aa27.02■■□□□ 1.92
AC105339.3-201ENST00000560043 ESF1Q9H501 851 aaKnown RBP27.02■■□□□ 1.92
AC105339.3-201ENST00000560043 TSPY4P0CV99 314 aa27■■□□□ 1.91
AC105339.3-201ENST00000560043 TSPY10P0CW01 314 aa27■■□□□ 1.91
AC105339.3-201ENST00000560043 ARHGEF5Q12774 1597 aa26.99■■□□□ 1.91
AC105339.3-201ENST00000560043 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.91
AC105339.3-201ENST00000560043 PLXNC1O60486 1568 aa26.95■■□□□ 1.9
AC105339.3-201ENST00000560043 CEBPAP49715 358 aaPredicted RBP26.94■■□□□ 1.9
AC105339.3-201ENST00000560043 DHX29Q7Z478 1369 aaKnown RBP26.93■■□□□ 1.9
AC105339.3-201ENST00000560043 CNTLNQ9NXG0 1405 aa26.91■■□□□ 1.9
AC105339.3-201ENST00000560043 GGT6Q6P531 493 aa26.89■■□□□ 1.9
AC105339.3-201ENST00000560043 LMTK3Q96Q04 1460 aa26.87■■□□□ 1.89
AC105339.3-201ENST00000560043 PPP6R1Q9UPN7 881 aa26.87■■□□□ 1.89
AC105339.3-201ENST00000560043 FGD6Q6ZV73 1430 aa26.87■■□□□ 1.89
AC105339.3-201ENST00000560043 PTPN23Q9H3S7 1636 aa26.85■■□□□ 1.89
AC105339.3-201ENST00000560043 MAST1Q9Y2H9 1570 aa26.84■■□□□ 1.89
AC105339.3-201ENST00000560043 KIF3BO15066 747 aa26.83■■□□□ 1.89
AC105339.3-201ENST00000560043 C3P01024 1663 aa26.81■■□□□ 1.88
AC105339.3-201ENST00000560043 ZMYM3Q14202 1370 aa26.81■■□□□ 1.88
AC105339.3-201ENST00000560043 TCOF1Q13428 1488 aaKnown RBP26.81■■□□□ 1.88
AC105339.3-201ENST00000560043 HSPA2P54652 639 aa26.79■■□□□ 1.88
AC105339.3-201ENST00000560043 ABCC5O15440 1437 aa26.79■■□□□ 1.88
AC105339.3-201ENST00000560043 MROH2AA6NES4 1674 aa26.78■■□□□ 1.88
AC105339.3-201ENST00000560043 SETD1BQ9UPS6 1966 aaKnown RBP26.77■■□□□ 1.88
AC105339.3-201ENST00000560043 SHANK2Q9UPX8 1470 aa26.75■■□□□ 1.87
AC105339.3-201ENST00000560043 UHRF1BP1Q6BDS2 1440 aa26.75■■□□□ 1.87
AC105339.3-201ENST00000560043 CLTCQ00610 1675 aaKnown RBP26.75■■□□□ 1.87
AC105339.3-201ENST00000560043 PREX1Q8TCU6 1659 aa26.75■■□□□ 1.87
AC105339.3-201ENST00000560043 DAPK1P53355 1430 aa26.74■■□□□ 1.87
AC105339.3-201ENST00000560043 FAM50AQ14320 339 aaKnown RBP26.72■■□□□ 1.87
AC105339.3-201ENST00000560043 NPATQ14207 1427 aa26.72■■□□□ 1.87
AC105339.3-201ENST00000560043 DNMT1P26358 1616 aaKnown RBP26.72■■□□□ 1.87
AC105339.3-201ENST00000560043 CROCC2H7BZ55 1655 aa26.7■■□□□ 1.86
AC105339.3-201ENST00000560043 WASHC2CQ9Y4E1 1318 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms