RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 NEO1Q92859 1461 aa23.05■■□□□ 1.28
SNRPA1-207ENST00000559309 MIA2Q96PC5 1412 aa23.04■■□□□ 1.28
SNRPA1-207ENST00000559309 TSPOAP1O95153 1857 aa23.03■■□□□ 1.28
SNRPA1-207ENST00000559309 CFAP74Q9C0B2 1584 aa23.03■■□□□ 1.28
SNRPA1-207ENST00000559309 TEX14Q8IWB6 1497 aa23.03■■□□□ 1.28
SNRPA1-207ENST00000559309 FANCAO15360 1455 aa23.01■■□□□ 1.27
SNRPA1-207ENST00000559309 SAMD9LQ8IVG5 1584 aa23.01■■□□□ 1.27
SNRPA1-207ENST00000559309 ARHGAP5Q13017 1502 aa22.99■■□□□ 1.27
SNRPA1-207ENST00000559309 KDM6BO15054 1643 aa22.99■■□□□ 1.27
SNRPA1-207ENST00000559309 FGD6Q6ZV73 1430 aa22.99■■□□□ 1.27
SNRPA1-207ENST00000559309 TCOF1Q13428 1488 aaKnown RBP22.98■■□□□ 1.27
SNRPA1-207ENST00000559309 ABCC1P33527 1531 aa22.97■■□□□ 1.27
SNRPA1-207ENST00000559309 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
SNRPA1-207ENST00000559309 EFCAB2Q5VUJ9 269 aa22.96■■□□□ 1.27
SNRPA1-207ENST00000559309 AKNAQ7Z591 1439 aa22.96■■□□□ 1.27
SNRPA1-207ENST00000559309 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.26
SNRPA1-207ENST00000559309 RRBP1Q9P2E9 1410 aaKnown RBP22.95■■□□□ 1.26
SNRPA1-207ENST00000559309 KIAA1107Q9UPP5 1409 aa22.94■■□□□ 1.26
SNRPA1-207ENST00000559309 CFDP1Q9UEE9 299 aaPredicted RBP22.94■■□□□ 1.26
SNRPA1-207ENST00000559309 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
SNRPA1-207ENST00000559309 ARHGEF12Q9NZN5 1544 aa22.93■■□□□ 1.26
SNRPA1-207ENST00000559309 MBD5Q9P267 1494 aa22.92■■□□□ 1.26
SNRPA1-207ENST00000559309 CAMSAP2Q08AD1 1489 aa22.92■■□□□ 1.26
SNRPA1-207ENST00000559309 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
SNRPA1-207ENST00000559309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.91■■□□□ 1.26
SNRPA1-207ENST00000559309 PLEKHH2Q8IVE3 1493 aa22.91■■□□□ 1.26
SNRPA1-207ENST00000559309 ARHGEF5Q12774 1597 aa22.89■■□□□ 1.26
SNRPA1-207ENST00000559309 ADGRL1O94910 1474 aa22.89■■□□□ 1.25
SNRPA1-207ENST00000559309 FRMPD1Q5SYB0 1578 aa22.89■■□□□ 1.25
SNRPA1-207ENST00000559309 RICTORQ6R327 1708 aa22.88■■□□□ 1.25
SNRPA1-207ENST00000559309 ZNF644Q9H582 1327 aaPredicted RBP22.88■■□□□ 1.25
SNRPA1-207ENST00000559309 SYCP2Q9BX26 1530 aa22.87■■□□□ 1.25
SNRPA1-207ENST00000559309 KDM5CP41229 1560 aa22.86■■□□□ 1.25
SNRPA1-207ENST00000559309 SCAPERQ9BY12 1400 aa22.85■■□□□ 1.25
SNRPA1-207ENST00000559309 POGZQ7Z3K3 1410 aa22.84■■□□□ 1.25
SNRPA1-207ENST00000559309 DNMT1P26358 1616 aaKnown RBP22.82■■□□□ 1.24
SNRPA1-207ENST00000559309 DENND4BO75064 1496 aaPredicted RBP22.82■■□□□ 1.24
SNRPA1-207ENST00000559309 ZMYM4Q5VZL5 1548 aa22.82■■□□□ 1.24
SNRPA1-207ENST00000559309 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
SNRPA1-207ENST00000559309 ZNF518AQ6AHZ1 1483 aa22.8■■□□□ 1.24
SNRPA1-207ENST00000559309 CROCC2H7BZ55 1655 aa22.79■■□□□ 1.24
SNRPA1-207ENST00000559309 MAST1Q9Y2H9 1570 aa22.78■■□□□ 1.24
SNRPA1-207ENST00000559309 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
SNRPA1-207ENST00000559309 RSPH4AQ5TD94 716 aa22.77■■□□□ 1.24
SNRPA1-207ENST00000559309 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.24
SNRPA1-207ENST00000559309 ABCC5O15440 1437 aa22.76■■□□□ 1.23
SNRPA1-207ENST00000559309 SHANK2Q9UPX8 1470 aa22.76■■□□□ 1.23
SNRPA1-207ENST00000559309 INO80Q9ULG1 1556 aaPredicted RBP22.76■■□□□ 1.23
SNRPA1-207ENST00000559309 MLH3Q9UHC1 1453 aa22.75■■□□□ 1.23
SNRPA1-207ENST00000559309 HNRNPMP52272 730 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNRPA1-207ENST00000559309 DAPK1P53355 1430 aa22.74■■□□□ 1.23
SNRPA1-207ENST00000559309 RTEL1-TNFRSF6BF6WH68 1400 aa22.73■■□□□ 1.23
SNRPA1-207ENST00000559309 MAGI2Q86UL8 1455 aa22.73■■□□□ 1.23
SNRPA1-207ENST00000559309 KIDINS220Q9ULH0 1771 aa22.72■■□□□ 1.23
SNRPA1-207ENST00000559309 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
SNRPA1-207ENST00000559309 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
SNRPA1-207ENST00000559309 ZFYVE16Q7Z3T8 1539 aa22.72■■□□□ 1.23
SNRPA1-207ENST00000559309 HECW2Q9P2P5 1572 aa22.72■■□□□ 1.23
SNRPA1-207ENST00000559309 AFAP1Q8N556 730 aa22.71■■□□□ 1.23
SNRPA1-207ENST00000559309 ADGRL2O95490 1459 aa22.68■■□□□ 1.22
SNRPA1-207ENST00000559309 PLXNC1O60486 1568 aa22.67■■□□□ 1.22
SNRPA1-207ENST00000559309 ATP7AQ04656 1500 aa22.67■■□□□ 1.22
SNRPA1-207ENST00000559309 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
SNRPA1-207ENST00000559309 C9orf84Q5VXU9 1444 aa22.65■■□□□ 1.22
SNRPA1-207ENST00000559309 ARHGEF40Q8TER5 1519 aa22.64■■□□□ 1.21
SNRPA1-207ENST00000559309 ADGBQ8N7X0 1667 aa22.64■■□□□ 1.21
SNRPA1-207ENST00000559309 ABCA6Q8N139 1617 aa22.64■■□□□ 1.21
SNRPA1-207ENST00000559309 DIP2CQ9Y2E4 1556 aa22.63■■□□□ 1.21
SNRPA1-207ENST00000559309 REREQ9P2R6 1566 aa22.63■■□□□ 1.21
SNRPA1-207ENST00000559309 YEATS2Q9ULM3 1422 aa22.61■■□□□ 1.21
SNRPA1-207ENST00000559309 ROCK1Q13464 1354 aa22.61■■□□□ 1.21
SNRPA1-207ENST00000559309 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
SNRPA1-207ENST00000559309 NCOA1Q15788 1441 aa22.6■■□□□ 1.21
SNRPA1-207ENST00000559309 TSPY4P0CV99 314 aa22.57■■□□□ 1.2
SNRPA1-207ENST00000559309 TSPY10P0CW01 314 aa22.57■■□□□ 1.2
SNRPA1-207ENST00000559309 SIGLEC1Q9BZZ2 1709 aa22.55■■□□□ 1.2
SNRPA1-207ENST00000559309 ATP10AO60312 1499 aa22.54■■□□□ 1.2
SNRPA1-207ENST00000559309 BCORL1Q5H9F3 1711 aa22.54■■□□□ 1.2
SNRPA1-207ENST00000559309 DUOX2Q9NRD8 1548 aa22.52■■□□□ 1.19
SNRPA1-207ENST00000559309 ANKRD30AQ9BXX3 1397 aa22.51■■□□□ 1.19
SNRPA1-207ENST00000559309 GCC2Q8IWJ2 1684 aa22.51■■□□□ 1.19
SNRPA1-207ENST00000559309 AGLP35573 1532 aa22.51■■□□□ 1.19
SNRPA1-207ENST00000559309 HFM1A2PYH4 1435 aa22.5■■□□□ 1.19
SNRPA1-207ENST00000559309 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
SNRPA1-207ENST00000559309 DHX29Q7Z478 1369 aaKnown RBP22.5■■□□□ 1.19
SNRPA1-207ENST00000559309 A2MP01023 1474 aa22.49■■□□□ 1.19
SNRPA1-207ENST00000559309 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
SNRPA1-207ENST00000559309 NAIPQ13075 1403 aa22.48■■□□□ 1.19
SNRPA1-207ENST00000559309 KIF15Q9NS87 1388 aa22.48■■□□□ 1.19
SNRPA1-207ENST00000559309 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
SNRPA1-207ENST00000559309 CHIC2Q9UKJ5 165 aa22.46■■□□□ 1.19
SNRPA1-207ENST00000559309 ILDR1Q86SU0 546 aaPredicted RBP22.44■■□□□ 1.18
SNRPA1-207ENST00000559309 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
SNRPA1-207ENST00000559309 ITGAEP38570 1179 aa22.42■■□□□ 1.18
SNRPA1-207ENST00000559309 RNF17Q9BXT8 1623 aaKnown RBP22.42■■□□□ 1.18
SNRPA1-207ENST00000559309 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
SNRPA1-207ENST00000559309 MROH1Q8NDA8 1641 aa22.4■■□□□ 1.18
SNRPA1-207ENST00000559309 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
SNRPA1-207ENST00000559309 UNC13BO14795 1591 aa22.36■■□□□ 1.17
SNRPA1-207ENST00000559309 VWDEQ8N2E2 1590 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms