RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 MADDQ8WXG6 1647 aa25.01■■□□□ 1.59
IRF9-204ENST00000559229 TROQ12816 1431 aaPredicted RBP25■■□□□ 1.59
IRF9-204ENST00000559229 ZFYVE16Q7Z3T8 1539 aa25■■□□□ 1.59
IRF9-204ENST00000559229 CLIP1P30622 1438 aa24.95■■□□□ 1.59
IRF9-204ENST00000559229 KIF14Q15058 1648 aa24.93■■□□□ 1.58
IRF9-204ENST00000559229 MYO5CQ9NQX4 1742 aa24.92■■□□□ 1.58
IRF9-204ENST00000559229 ATP10AO60312 1499 aa24.91■■□□□ 1.58
IRF9-204ENST00000559229 CASKIN1Q8WXD9 1431 aa24.91■■□□□ 1.58
IRF9-204ENST00000559229 MLECQ14165 292 aa24.9■■□□□ 1.58
IRF9-204ENST00000559229 PCF11O94913 1555 aaKnown RBP24.89■■□□□ 1.58
IRF9-204ENST00000559229 RIMS1Q86UR5 1692 aaKnown RBP24.89■■□□□ 1.58
IRF9-204ENST00000559229 LMTK3Q96Q04 1460 aa24.89■■□□□ 1.57
IRF9-204ENST00000559229 ARHGAP5Q13017 1502 aa24.88■■□□□ 1.57
IRF9-204ENST00000559229 AFAP1Q8N556 730 aa24.88■■□□□ 1.57
IRF9-204ENST00000559229 SIGLEC1Q9BZZ2 1709 aa24.88■■□□□ 1.57
IRF9-204ENST00000559229 ZNF518AQ6AHZ1 1483 aa24.88■■□□□ 1.57
IRF9-204ENST00000559229 CCDC18Q5T9S5 1454 aa24.87■■□□□ 1.57
IRF9-204ENST00000559229 C9orf84Q5VXU9 1444 aa24.86■■□□□ 1.57
IRF9-204ENST00000559229 PLPPR3Q6T4P5 718 aa24.85■■□□□ 1.57
IRF9-204ENST00000559229 LRRIQ1Q96JM4 1722 aa24.85■■□□□ 1.57
IRF9-204ENST00000559229 KDM5CP41229 1560 aa24.8■■□□□ 1.56
IRF9-204ENST00000559229 MYT1LQ9UL68 1186 aa24.79■■□□□ 1.56
IRF9-204ENST00000559229 ARHGEF12Q9NZN5 1544 aa24.79■■□□□ 1.56
IRF9-204ENST00000559229 HSPA2P54652 639 aa24.78■■□□□ 1.56
IRF9-204ENST00000559229 FYCO1Q9BQS8 1478 aa24.77■■□□□ 1.56
IRF9-204ENST00000559229 CDC42BPBQ9Y5S2 1711 aa24.76■■□□□ 1.55
IRF9-204ENST00000559229 MLH3Q9UHC1 1453 aa24.76■■□□□ 1.55
IRF9-204ENST00000559229 TRAPPC8Q9Y2L5 1435 aa24.74■■□□□ 1.55
IRF9-204ENST00000559229 FER1L4A9Z1Z3 1794 aa24.74■■□□□ 1.55
IRF9-204ENST00000559229 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
IRF9-204ENST00000559229 CEBPAP49715 358 aaPredicted RBP24.71■■□□□ 1.55
IRF9-204ENST00000559229 ABCC1P33527 1531 aa24.71■■□□□ 1.55
IRF9-204ENST00000559229 DIP2CQ9Y2E4 1556 aa24.7■■□□□ 1.54
IRF9-204ENST00000559229 REREQ9P2R6 1566 aa24.69■■□□□ 1.54
IRF9-204ENST00000559229 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
IRF9-204ENST00000559229 GPATCH8Q9UKJ3 1502 aaKnown RBP24.65■■□□□ 1.54
IRF9-204ENST00000559229 AGLP35573 1532 aa24.64■■□□□ 1.53
IRF9-204ENST00000559229 ABCA6Q8N139 1617 aa24.64■■□□□ 1.53
IRF9-204ENST00000559229 CDC42BPAQ5VT25 1732 aa24.64■■□□□ 1.53
IRF9-204ENST00000559229 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
IRF9-204ENST00000559229 ILDR2Q71H61 639 aa24.62■■□□□ 1.53
IRF9-204ENST00000559229 ESF1Q9H501 851 aaKnown RBP24.61■■□□□ 1.53
IRF9-204ENST00000559229 HNRNPMP52272 730 aaKnown RBP eCLIP24.6■■□□□ 1.53
IRF9-204ENST00000559229 CFDP1Q9UEE9 299 aaPredicted RBP24.6■■□□□ 1.53
IRF9-204ENST00000559229 KIDINS220Q9ULH0 1771 aa24.58■■□□□ 1.53
IRF9-204ENST00000559229 KIAA1107Q9UPP5 1409 aa24.58■■□□□ 1.53
IRF9-204ENST00000559229 SPAG9O60271 1321 aaKnown RBP24.58■■□□□ 1.52
IRF9-204ENST00000559229 MTUS2Q5JR59 1369 aa24.57■■□□□ 1.52
IRF9-204ENST00000559229 CCNB3Q8WWL7 1395 aa24.57■■□□□ 1.52
IRF9-204ENST00000559229 CERKQ8TCT0 537 aa24.57■■□□□ 1.52
IRF9-204ENST00000559229 SAMD9LQ8IVG5 1584 aa24.57■■□□□ 1.52
IRF9-204ENST00000559229 PREX1Q8TCU6 1659 aa24.56■■□□□ 1.52
IRF9-204ENST00000559229 UHRF1BP1Q6BDS2 1440 aa24.56■■□□□ 1.52
IRF9-204ENST00000559229 SYCP2Q9BX26 1530 aa24.55■■□□□ 1.52
IRF9-204ENST00000559229 PLEKHH2Q8IVE3 1493 aa24.54■■□□□ 1.52
IRF9-204ENST00000559229 SETD1BQ9UPS6 1966 aaKnown RBP24.54■■□□□ 1.52
IRF9-204ENST00000559229 DMRT2Q9Y5R5 561 aa24.53■■□□□ 1.52
IRF9-204ENST00000559229 DISP3Q9P2K9 1392 aa24.52■■□□□ 1.52
IRF9-204ENST00000559229 CNTLNQ9NXG0 1405 aa24.52■■□□□ 1.52
IRF9-204ENST00000559229 SOCS7O14512 581 aa24.5■■□□□ 1.51
IRF9-204ENST00000559229 C3P01024 1663 aa24.48■■□□□ 1.51
IRF9-204ENST00000559229 CEP162Q5TB80 1403 aa24.46■■□□□ 1.51
IRF9-204ENST00000559229 ATP7AQ04656 1500 aa24.45■■□□□ 1.51
IRF9-204ENST00000559229 ZNF644Q9H582 1327 aaPredicted RBP24.44■■□□□ 1.5
IRF9-204ENST00000559229 ZMYM3Q14202 1370 aa24.43■■□□□ 1.5
IRF9-204ENST00000559229 A2MP01023 1474 aa24.43■■□□□ 1.5
IRF9-204ENST00000559229 EHBP1L1Q8N3D4 1523 aa24.42■■□□□ 1.5
IRF9-204ENST00000559229 STRCQ7RTU9 1775 aa24.42■■□□□ 1.5
IRF9-204ENST00000559229 NPATQ14207 1427 aa24.41■■□□□ 1.5
IRF9-204ENST00000559229 INO80Q9ULG1 1556 aaPredicted RBP24.41■■□□□ 1.5
IRF9-204ENST00000559229 TIAM1Q13009 1591 aa24.4■■□□□ 1.5
IRF9-204ENST00000559229 MBD5Q9P267 1494 aa24.39■■□□□ 1.5
IRF9-204ENST00000559229 PLXNC1O60486 1568 aa24.39■■□□□ 1.5
IRF9-204ENST00000559229 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
IRF9-204ENST00000559229 PTPRTO14522 1441 aa24.38■■□□□ 1.49
IRF9-204ENST00000559229 GGT6Q6P531 493 aa24.38■■□□□ 1.49
IRF9-204ENST00000559229 SUPT6HQ7KZ85 1726 aaKnown RBP24.37■■□□□ 1.49
IRF9-204ENST00000559229 MROH2AA6NES4 1674 aa24.36■■□□□ 1.49
IRF9-204ENST00000559229 RTEL1-TNFRSF6BF6WH68 1400 aa24.35■■□□□ 1.49
IRF9-204ENST00000559229 RSPH4AQ5TD94 716 aa24.32■■□□□ 1.48
IRF9-204ENST00000559229 NCOA1Q15788 1441 aa24.32■■□□□ 1.48
IRF9-204ENST00000559229 DHX29Q7Z478 1369 aaKnown RBP24.31■■□□□ 1.48
IRF9-204ENST00000559229 NCOA2Q15596 1464 aa24.31■■□□□ 1.48
IRF9-204ENST00000559229 PTPRKQ15262 1439 aa24.28■■□□□ 1.48
IRF9-204ENST00000559229 ADGBQ8N7X0 1667 aa24.28■■□□□ 1.48
IRF9-204ENST00000559229 LOC105371045A0A1W2PR82 267 aa24.28■■□□□ 1.48
IRF9-204ENST00000559229 SPATA31D1Q6ZQQ2 1576 aa24.27■■□□□ 1.48
IRF9-204ENST00000559229 CLTCQ00610 1675 aaKnown RBP24.27■■□□□ 1.48
IRF9-204ENST00000559229 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
IRF9-204ENST00000559229 CAMSAP1Q5T5Y3 1602 aa24.24■■□□□ 1.47
IRF9-204ENST00000559229 CAMSAP2Q08AD1 1489 aa24.24■■□□□ 1.47
IRF9-204ENST00000559229 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
IRF9-204ENST00000559229 NCKAP5LQ9HCH0 1330 aa24.22■■□□□ 1.47
IRF9-204ENST00000559229 KIF3BO15066 747 aa24.22■■□□□ 1.47
IRF9-204ENST00000559229 TSPY4P0CV99 314 aa24.21■■□□□ 1.47
IRF9-204ENST00000559229 TSPY10P0CW01 314 aa24.21■■□□□ 1.47
IRF9-204ENST00000559229 PKD2Q13563 968 aa24.21■■□□□ 1.47
IRF9-204ENST00000559229 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
IRF9-204ENST00000559229 LTBP4Q8N2S1 1624 aa24.19■■□□□ 1.46
IRF9-204ENST00000559229 PLA2R1Q13018 1463 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms