RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SAMD9LQ8IVG5 1584 aa17.18■□□□□ 0.34
TPM1-217ENST00000559108 FANCAO15360 1455 aa17.18■□□□□ 0.34
TPM1-217ENST00000559108 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
TPM1-217ENST00000559108 CFAP74Q9C0B2 1584 aa17.16■□□□□ 0.34
TPM1-217ENST00000559108 NEO1Q92859 1461 aa17.16■□□□□ 0.34
TPM1-217ENST00000559108 RICTORQ6R327 1708 aa17.15■□□□□ 0.34
TPM1-217ENST00000559108 PPARGC1BQ86YN6 1023 aaKnown RBP17.14■□□□□ 0.33
TPM1-217ENST00000559108 ARHGEF12Q9NZN5 1544 aa17.14■□□□□ 0.33
TPM1-217ENST00000559108 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
TPM1-217ENST00000559108 ABCC1P33527 1531 aa17.13■□□□□ 0.33
TPM1-217ENST00000559108 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
TPM1-217ENST00000559108 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
TPM1-217ENST00000559108 APLP2Q06481 763 aa17.09■□□□□ 0.33
TPM1-217ENST00000559108 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
TPM1-217ENST00000559108 SYCP2Q9BX26 1530 aa17.08■□□□□ 0.32
TPM1-217ENST00000559108 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
TPM1-217ENST00000559108 ZNF644Q9H582 1327 aaPredicted RBP17.08■□□□□ 0.32
TPM1-217ENST00000559108 CAMSAP2Q08AD1 1489 aa17.05■□□□□ 0.32
TPM1-217ENST00000559108 SCAPERQ9BY12 1400 aa17.05■□□□□ 0.32
TPM1-217ENST00000559108 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
TPM1-217ENST00000559108 POGZQ7Z3K3 1410 aa17.04■□□□□ 0.32
TPM1-217ENST00000559108 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
TPM1-217ENST00000559108 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
TPM1-217ENST00000559108 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
TPM1-217ENST00000559108 KDM5CP41229 1560 aa17.03■□□□□ 0.32
TPM1-217ENST00000559108 ZMYM4Q5VZL5 1548 aa17.03■□□□□ 0.32
TPM1-217ENST00000559108 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
TPM1-217ENST00000559108 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
TPM1-217ENST00000559108 SIGLEC1Q9BZZ2 1709 aa17.02■□□□□ 0.32
TPM1-217ENST00000559108 MBD5Q9P267 1494 aa17.02■□□□□ 0.32
TPM1-217ENST00000559108 ZNF777Q9ULD5 760 aaPredicted RBP17.02■□□□□ 0.32
TPM1-217ENST00000559108 FGD6Q6ZV73 1430 aa17.02■□□□□ 0.31
TPM1-217ENST00000559108 TCOF1Q13428 1488 aaKnown RBP16.99■□□□□ 0.31
TPM1-217ENST00000559108 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
TPM1-217ENST00000559108 KIDINS220Q9ULH0 1771 aa16.99■□□□□ 0.31
TPM1-217ENST00000559108 CROCC2H7BZ55 1655 aa16.98■□□□□ 0.31
TPM1-217ENST00000559108 ARHGEF5Q12774 1597 aa16.98■□□□□ 0.31
TPM1-217ENST00000559108 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
TPM1-217ENST00000559108 YEATS2Q9ULM3 1422 aa16.97■□□□□ 0.31
TPM1-217ENST00000559108 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
TPM1-217ENST00000559108 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
TPM1-217ENST00000559108 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
TPM1-217ENST00000559108 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
TPM1-217ENST00000559108 HECW2Q9P2P5 1572 aa16.97■□□□□ 0.31
TPM1-217ENST00000559108 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.31
TPM1-217ENST00000559108 ZNF518AQ6AHZ1 1483 aa16.96■□□□□ 0.31
TPM1-217ENST00000559108 PLEKHH2Q8IVE3 1493 aa16.96■□□□□ 0.31
TPM1-217ENST00000559108 ZFYVE16Q7Z3T8 1539 aa16.95■□□□□ 0.3
TPM1-217ENST00000559108 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
TPM1-217ENST00000559108 DNMT1P26358 1616 aaKnown RBP16.94■□□□□ 0.3
TPM1-217ENST00000559108 ADGBQ8N7X0 1667 aa16.92■□□□□ 0.3
TPM1-217ENST00000559108 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
TPM1-217ENST00000559108 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
TPM1-217ENST00000559108 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
TPM1-217ENST00000559108 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.3
TPM1-217ENST00000559108 ABCC5O15440 1437 aa16.89■□□□□ 0.29
TPM1-217ENST00000559108 RRBP1Q9P2E9 1410 aaKnown RBP16.89■□□□□ 0.29
TPM1-217ENST00000559108 DAPK1P53355 1430 aa16.87■□□□□ 0.29
TPM1-217ENST00000559108 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
TPM1-217ENST00000559108 MAGI2Q86UL8 1455 aa16.87■□□□□ 0.29
TPM1-217ENST00000559108 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
TPM1-217ENST00000559108 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
TPM1-217ENST00000559108 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
TPM1-217ENST00000559108 REREQ9P2R6 1566 aa16.83■□□□□ 0.28
TPM1-217ENST00000559108 SPAG9O60271 1321 aaKnown RBP16.82■□□□□ 0.28
TPM1-217ENST00000559108 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
TPM1-217ENST00000559108 ATP10AO60312 1499 aa16.81■□□□□ 0.28
TPM1-217ENST00000559108 RTEL1-TNFRSF6BF6WH68 1400 aa16.8■□□□□ 0.28
TPM1-217ENST00000559108 BCORL1Q5H9F3 1711 aa16.79■□□□□ 0.28
TPM1-217ENST00000559108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.78■□□□□ 0.28
TPM1-217ENST00000559108 ADGRL2O95490 1459 aa16.77■□□□□ 0.28
TPM1-217ENST00000559108 A2MP01023 1474 aa16.76■□□□□ 0.27
TPM1-217ENST00000559108 ADAMTSL3P82987 1691 aa16.75■□□□□ 0.27
TPM1-217ENST00000559108 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
TPM1-217ENST00000559108 AGLP35573 1532 aa16.75■□□□□ 0.27
TPM1-217ENST00000559108 CHIC2Q9UKJ5 165 aa16.74■□□□□ 0.27
TPM1-217ENST00000559108 NCOA1Q15788 1441 aa16.73■□□□□ 0.27
TPM1-217ENST00000559108 MADDQ8WXG6 1647 aa16.73■□□□□ 0.27
TPM1-217ENST00000559108 MROH1Q8NDA8 1641 aa16.72■□□□□ 0.27
TPM1-217ENST00000559108 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
TPM1-217ENST00000559108 ITGAEP38570 1179 aa16.71■□□□□ 0.27
TPM1-217ENST00000559108 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
TPM1-217ENST00000559108 KIF15Q9NS87 1388 aa16.7■□□□□ 0.26
TPM1-217ENST00000559108 TSPY4P0CV99 314 aa16.7■□□□□ 0.26
TPM1-217ENST00000559108 TSPY10P0CW01 314 aa16.7■□□□□ 0.26
TPM1-217ENST00000559108 RNF17Q9BXT8 1623 aaKnown RBP16.7■□□□□ 0.26
TPM1-217ENST00000559108 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
TPM1-217ENST00000559108 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
TPM1-217ENST00000559108 FER1L4A9Z1Z3 1794 aa16.69■□□□□ 0.26
TPM1-217ENST00000559108 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
TPM1-217ENST00000559108 KDM4FA0A1W2PPD8 638 aa16.69■□□□□ 0.26
TPM1-217ENST00000559108 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
TPM1-217ENST00000559108 RIMS1Q86UR5 1692 aaKnown RBP16.68■□□□□ 0.26
TPM1-217ENST00000559108 DEPDC5O75140 1603 aa16.67■□□□□ 0.26
TPM1-217ENST00000559108 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
TPM1-217ENST00000559108 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
TPM1-217ENST00000559108 MLECQ14165 292 aa16.65■□□□□ 0.26
TPM1-217ENST00000559108 CLTCQ00610 1675 aaKnown RBP16.64■□□□□ 0.25
TPM1-217ENST00000559108 ARID4BQ4LE39 1312 aaPredicted RBP16.64■□□□□ 0.25
TPM1-217ENST00000559108 ERBINQ96RT1 1412 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms