RNA–Protein interactions for RNA: ENST00000558948.1

AC013652.2-202, humanhuman

TSL 3 BASIC

Gene AC013652.2, Length 910 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013652.2-202ENST00000558948 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
AC013652.2-202ENST00000558948 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
AC013652.2-202ENST00000558948 ERBB3P21860 1342 aa12.88□□□□□ -0.35
AC013652.2-202ENST00000558948 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
AC013652.2-202ENST00000558948 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
AC013652.2-202ENST00000558948 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
AC013652.2-202ENST00000558948 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
AC013652.2-202ENST00000558948 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
AC013652.2-202ENST00000558948 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
AC013652.2-202ENST00000558948 SMARCA2P51531 1590 aa12.79□□□□□ -0.36
AC013652.2-202ENST00000558948 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
AC013652.2-202ENST00000558948 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
AC013652.2-202ENST00000558948 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
AC013652.2-202ENST00000558948 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
AC013652.2-202ENST00000558948 MICALL2Q8IY33 904 aa12.75□□□□□ -0.37
AC013652.2-202ENST00000558948 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
AC013652.2-202ENST00000558948 SOX12O15370 315 aa12.73□□□□□ -0.37
AC013652.2-202ENST00000558948 MROH2BQ7Z745 1585 aa12.72□□□□□ -0.37
AC013652.2-202ENST00000558948 TMEM92Q6UXU6 159 aa12.69□□□□□ -0.38
AC013652.2-202ENST00000558948 ZNF687Q8N1G0 1237 aa12.69□□□□□ -0.38
AC013652.2-202ENST00000558948 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
AC013652.2-202ENST00000558948 NESP48681 1621 aa12.68□□□□□ -0.38
AC013652.2-202ENST00000558948 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
AC013652.2-202ENST00000558948 CUX2O14529 1486 aa12.66□□□□□ -0.38
AC013652.2-202ENST00000558948 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
AC013652.2-202ENST00000558948 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
AC013652.2-202ENST00000558948 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
AC013652.2-202ENST00000558948 PTGER2P43116 358 aa12.63□□□□□ -0.39
AC013652.2-202ENST00000558948 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
AC013652.2-202ENST00000558948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
AC013652.2-202ENST00000558948 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
AC013652.2-202ENST00000558948 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
AC013652.2-202ENST00000558948 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
AC013652.2-202ENST00000558948 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
AC013652.2-202ENST00000558948 THOC2Q8NI27 1593 aaKnown RBP12.58□□□□□ -0.4
AC013652.2-202ENST00000558948 LAMC3Q9Y6N6 1575 aa12.57□□□□□ -0.4
AC013652.2-202ENST00000558948 ARSIQ5FYB1 569 aa12.57□□□□□ -0.4
AC013652.2-202ENST00000558948 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
AC013652.2-202ENST00000558948 WIZO95785 1651 aa12.56□□□□□ -0.4
AC013652.2-202ENST00000558948 NLRP6P59044 892 aa12.54□□□□□ -0.4
AC013652.2-202ENST00000558948 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
AC013652.2-202ENST00000558948 KIF21AQ7Z4S6 1674 aa12.53□□□□□ -0.4
AC013652.2-202ENST00000558948 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
AC013652.2-202ENST00000558948 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
AC013652.2-202ENST00000558948 CADPSQ9ULU8 1353 aa12.47□□□□□ -0.41
AC013652.2-202ENST00000558948 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.41
AC013652.2-202ENST00000558948 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC013652.2-202ENST00000558948 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
AC013652.2-202ENST00000558948 FBXO22Q8NEZ5 403 aa12.45□□□□□ -0.42
AC013652.2-202ENST00000558948 BCL11BQ9C0K0 894 aaPredicted RBP12.45□□□□□ -0.42
AC013652.2-202ENST00000558948 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
AC013652.2-202ENST00000558948 PBX2P40425 430 aa12.42□□□□□ -0.42
AC013652.2-202ENST00000558948 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
AC013652.2-202ENST00000558948 WDR62O43379 1518 aa12.39□□□□□ -0.43
AC013652.2-202ENST00000558948 KIF3CO14782 793 aa12.39□□□□□ -0.43
AC013652.2-202ENST00000558948 TOP2AP11388 1531 aaKnown RBP12.38□□□□□ -0.43
AC013652.2-202ENST00000558948 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
AC013652.2-202ENST00000558948 NUDT7P0C024 238 aa12.38□□□□□ -0.43
AC013652.2-202ENST00000558948 CFTRP13569 1480 aa12.38□□□□□ -0.43
AC013652.2-202ENST00000558948 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
AC013652.2-202ENST00000558948 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
AC013652.2-202ENST00000558948 STK25O00506 426 aa12.34□□□□□ -0.43
AC013652.2-202ENST00000558948 SLC34A2O95436 690 aa12.34□□□□□ -0.43
AC013652.2-202ENST00000558948 LHX6Q9UPM6 363 aa12.33□□□□□ -0.44
AC013652.2-202ENST00000558948 PCDHGA4Q9Y5G9 962 aa12.32□□□□□ -0.44
AC013652.2-202ENST00000558948 FANCD2Q9BXW9 1451 aa12.32□□□□□ -0.44
AC013652.2-202ENST00000558948 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
AC013652.2-202ENST00000558948 CEP164Q9UPV0 1460 aa12.31□□□□□ -0.44
AC013652.2-202ENST00000558948 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
AC013652.2-202ENST00000558948 HCSTQ9UBK5 93 aa12.29□□□□□ -0.44
AC013652.2-202ENST00000558948 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
AC013652.2-202ENST00000558948 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
AC013652.2-202ENST00000558948 PRDM2Q13029 1718 aa12.27□□□□□ -0.45
AC013652.2-202ENST00000558948 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.45
AC013652.2-202ENST00000558948 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
AC013652.2-202ENST00000558948 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
AC013652.2-202ENST00000558948 ARHGAP33O14559 1287 aa12.24□□□□□ -0.45
AC013652.2-202ENST00000558948 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
AC013652.2-202ENST00000558948 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
AC013652.2-202ENST00000558948 TK2O00142 265 aa12.17□□□□□ -0.46
AC013652.2-202ENST00000558948 PTCD2Q8WV60 388 aaKnown RBP12.14□□□□□ -0.47
AC013652.2-202ENST00000558948 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
AC013652.2-202ENST00000558948 KDM4FA0A1W2PPD8 638 aa12.11□□□□□ -0.47
AC013652.2-202ENST00000558948 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
AC013652.2-202ENST00000558948 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
AC013652.2-202ENST00000558948 RGL2O15211 777 aa12.1□□□□□ -0.47
AC013652.2-202ENST00000558948 HRO43593 1189 aa12.1□□□□□ -0.47
AC013652.2-202ENST00000558948 PPP1R37O75864 691 aa12.1□□□□□ -0.47
AC013652.2-202ENST00000558948 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
AC013652.2-202ENST00000558948 PSEN2P49810 448 aa12.09□□□□□ -0.47
AC013652.2-202ENST00000558948 TBC1D12O60347 775 aa12.08□□□□□ -0.48
AC013652.2-202ENST00000558948 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
AC013652.2-202ENST00000558948 IFT140Q96RY7 1462 aa12.08□□□□□ -0.48
AC013652.2-202ENST00000558948 FOXK1P85037 733 aa12.07□□□□□ -0.48
AC013652.2-202ENST00000558948 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
AC013652.2-202ENST00000558948 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
AC013652.2-202ENST00000558948 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
AC013652.2-202ENST00000558948 TARBP1Q13395 1621 aaKnown RBP12.06□□□□□ -0.48
AC013652.2-202ENST00000558948 KCTD12Q96CX2 325 aaKnown RBP12.05□□□□□ -0.48
AC013652.2-202ENST00000558948 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms