RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 STK24Q9Y6E0 443 aa8.64□□□□□ -1.03
LRRC28-212ENST00000558911 ARSIQ5FYB1 569 aa8.63□□□□□ -1.03
LRRC28-212ENST00000558911 BCL11BQ9C0K0 894 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-212ENST00000558911 NLRP6P59044 892 aa8.62□□□□□ -1.03
LRRC28-212ENST00000558911 KHSRPQ92945 711 aaKnown RBP eCLIP8.62□□□□□ -1.03
LRRC28-212ENST00000558911 RNF166Q96A37 237 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-212ENST00000558911 GPR153Q6NV75 609 aa8.61□□□□□ -1.03
LRRC28-212ENST00000558911 ZNF687Q8N1G0 1237 aa8.6□□□□□ -1.03
LRRC28-212ENST00000558911 ZSWIM6Q9HCJ5 1215 aa8.6□□□□□ -1.03
LRRC28-212ENST00000558911 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
LRRC28-212ENST00000558911 MYT1LQ9UL68 1186 aa8.59□□□□□ -1.03
LRRC28-212ENST00000558911 STK25O00506 426 aa8.58□□□□□ -1.04
LRRC28-212ENST00000558911 TAOK2Q9UL54 1235 aa8.57□□□□□ -1.04
LRRC28-212ENST00000558911 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-212ENST00000558911 FBXO22Q8NEZ5 403 aa8.55□□□□□ -1.04
LRRC28-212ENST00000558911 MFRPQ9BY79 579 aa8.55□□□□□ -1.04
LRRC28-212ENST00000558911 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
LRRC28-212ENST00000558911 ZNF316A6NFI3 1004 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-212ENST00000558911 NUDT7P0C024 238 aa8.52□□□□□ -1.05
LRRC28-212ENST00000558911 AXIN2Q9Y2T1 843 aa8.48□□□□□ -1.05
LRRC28-212ENST00000558911 RGL2O15211 777 aa8.47□□□□□ -1.05
LRRC28-212ENST00000558911 LSM11P83369 360 aaKnown RBP eCLIP8.47□□□□□ -1.05
LRRC28-212ENST00000558911 TMC2Q8TDI7 906 aa8.47□□□□□ -1.05
LRRC28-212ENST00000558911 LHX6Q9UPM6 363 aa8.47□□□□□ -1.05
LRRC28-212ENST00000558911 KIF3CO14782 793 aa8.45□□□□□ -1.06
LRRC28-212ENST00000558911 PCDHGA4Q9Y5G9 962 aa8.45□□□□□ -1.06
LRRC28-212ENST00000558911 PTGER2P43116 358 aa8.44□□□□□ -1.06
LRRC28-212ENST00000558911 PPP1R37O75864 691 aa8.42□□□□□ -1.06
LRRC28-212ENST00000558911 PKD2Q13563 968 aa8.42□□□□□ -1.06
LRRC28-212ENST00000558911 POTEEQ6S8J3 1075 aa8.4□□□□□ -1.06
LRRC28-212ENST00000558911 PBX2P40425 430 aa8.38□□□□□ -1.07
LRRC28-212ENST00000558911 SLC34A2O95436 690 aa8.36□□□□□ -1.07
LRRC28-212ENST00000558911 ARHGAP33O14559 1287 aa8.33□□□□□ -1.08
LRRC28-212ENST00000558911 ADGRD1Q6QNK2 874 aa8.33□□□□□ -1.08
LRRC28-212ENST00000558911 PSEN2P49810 448 aa8.32□□□□□ -1.08
LRRC28-212ENST00000558911 PLPP6Q8IY26 295 aa8.32□□□□□ -1.08
LRRC28-212ENST00000558911 PLA2G2EQ9NZK7 142 aa8.32□□□□□ -1.08
LRRC28-212ENST00000558911 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
LRRC28-212ENST00000558911 STAC3Q96MF2 364 aa8.29□□□□□ -1.08
LRRC28-212ENST00000558911 HCSTQ9UBK5 93 aa8.29□□□□□ -1.08
LRRC28-212ENST00000558911 PSDA5PKW4 1024 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-212ENST00000558911 DSG2Q14126 1118 aa8.28□□□□□ -1.08
LRRC28-212ENST00000558911 CHGAP10645 457 aaKnown RBP8.27□□□□□ -1.09
LRRC28-212ENST00000558911 FOXK1P85037 733 aa8.27□□□□□ -1.09
LRRC28-212ENST00000558911 PPP4R3BQ5MIZ7 849 aa8.27□□□□□ -1.09
LRRC28-212ENST00000558911 PTCD2Q8WV60 388 aaKnown RBP8.27□□□□□ -1.09
LRRC28-212ENST00000558911 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
LRRC28-212ENST00000558911 TBC1D12O60347 775 aa8.26□□□□□ -1.09
LRRC28-212ENST00000558911 UPF1Q92900 1129 aaKnown RBP eCLIP8.26□□□□□ -1.09
LRRC28-212ENST00000558911 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-212ENST00000558911 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
LRRC28-212ENST00000558911 KDM4FA0A1W2PPD8 638 aa8.24□□□□□ -1.09
LRRC28-212ENST00000558911 HS6ST3Q8IZP7 471 aa8.23□□□□□ -1.09
LRRC28-212ENST00000558911 KCNH8Q96L42 1107 aa8.23□□□□□ -1.09
LRRC28-212ENST00000558911 TK2O00142 265 aa8.21□□□□□ -1.1
LRRC28-212ENST00000558911 HRO43593 1189 aa8.21□□□□□ -1.1
LRRC28-212ENST00000558911 PTPN5P54829 565 aa8.21□□□□□ -1.1
LRRC28-212ENST00000558911 ZNF454Q8N9F8 522 aa8.2□□□□□ -1.1
LRRC28-212ENST00000558911 NKX1-1Q15270 411 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-212ENST00000558911 PPP1R15BQ5SWA1 713 aa8.15□□□□□ -1.1
LRRC28-212ENST00000558911 OXER1Q8TDS5 423 aa8.15□□□□□ -1.1
LRRC28-212ENST00000558911 VPS9D1Q9Y2B5 631 aa8.15□□□□□ -1.1
LRRC28-212ENST00000558911 GOLGA8CPA6NN73 597 aa8.13□□□□□ -1.11
LRRC28-212ENST00000558911 PTPREP23469 700 aa8.11□□□□□ -1.11
LRRC28-212ENST00000558911 CRISPLD2Q9H0B8 497 aa8.1□□□□□ -1.11
LRRC28-212ENST00000558911 BCL2L12Q9HB09 334 aa8.1□□□□□ -1.11
LRRC28-212ENST00000558911 PDE4AP27815 886 aa8.09□□□□□ -1.11
LRRC28-212ENST00000558911 WNT2BQ93097 391 aa8.09□□□□□ -1.11
LRRC28-212ENST00000558911 RYDENQ9NUL5 291 aaKnown RBP8.09□□□□□ -1.11
LRRC28-212ENST00000558911 NCKAP5LQ9HCH0 1330 aa8.08□□□□□ -1.12
LRRC28-212ENST00000558911 EVI5O60447 810 aa8.08□□□□□ -1.12
LRRC28-212ENST00000558911 FOSBP53539 338 aa8.08□□□□□ -1.12
LRRC28-212ENST00000558911 MRPL50Q8N5N7 158 aaKnown RBP8.08□□□□□ -1.12
LRRC28-212ENST00000558911 LARP6Q9BRS8 491 aaKnown RBP8.08□□□□□ -1.12
LRRC28-212ENST00000558911 DCAF8L2P0C7V8 631 aa8.07□□□□□ -1.12
LRRC28-212ENST00000558911 MAP3K9P80192 1104 aa8.06□□□□□ -1.12
LRRC28-212ENST00000558911 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
LRRC28-212ENST00000558911 ADAM33Q9BZ11 813 aa8.06□□□□□ -1.12
LRRC28-212ENST00000558911 ZDHHC16Q969W1 377 aa8.05□□□□□ -1.12
LRRC28-212ENST00000558911 ZBED2Q9BTP6 218 aa8.05□□□□□ -1.12
LRRC28-212ENST00000558911 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
LRRC28-212ENST00000558911 DDX27Q96GQ7 796 aaKnown RBP8.04□□□□□ -1.12
LRRC28-212ENST00000558911 JPH4Q96JJ6 628 aa8.03□□□□□ -1.12
LRRC28-212ENST00000558911 SLC4A5Q9BY07 1137 aa8.02□□□□□ -1.13
LRRC28-212ENST00000558911 NBPF3Q9H094 633 aa8.02□□□□□ -1.13
LRRC28-212ENST00000558911 DNAJC5Q9H3Z4 198 aa8.01□□□□□ -1.13
LRRC28-212ENST00000558911 ANO8Q9HCE9 1232 aaPredicted RBP8.01□□□□□ -1.13
LRRC28-212ENST00000558911 GTPBP6O43824 516 aaPredicted RBP8□□□□□ -1.13
LRRC28-212ENST00000558911 PROX2Q3B8N5 592 aa8□□□□□ -1.13
LRRC28-212ENST00000558911 IRX2Q9BZI1 471 aaPredicted RBP7.99□□□□□ -1.13
LRRC28-212ENST00000558911 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
LRRC28-212ENST00000558911 PCDHGA10Q9Y5H3 936 aa7.97□□□□□ -1.13
LRRC28-212ENST00000558911 A0A0G2JS52 829 aa7.96□□□□□ -1.14
LRRC28-212ENST00000558911 PPP1R3GB7ZBB8 358 aa7.96□□□□□ -1.14
LRRC28-212ENST00000558911 COL9A1P20849 921 aa7.96□□□□□ -1.14
LRRC28-212ENST00000558911 BCAMP50895 628 aa7.96□□□□□ -1.14
LRRC28-212ENST00000558911 ANKK1Q8NFD2 765 aa7.96□□□□□ -1.14
LRRC28-212ENST00000558911 RABGEF1Q9UJ41 708 aa7.94□□□□□ -1.14
LRRC28-212ENST00000558911 MFSD10Q14728 455 aa7.93□□□□□ -1.14
LRRC28-212ENST00000558911 TYW1BQ6NUM6 668 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms