RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 LOC105371045A0A1W2PR82 267 aa9.29□□□□□ -0.92
CHRNA3-203ENST00000558903 C1QBPQ07021 282 aaKnown RBP9.29□□□□□ -0.92
CHRNA3-203ENST00000558903 ZNF219Q9P2Y4 722 aaPredicted RBP9.29□□□□□ -0.92
CHRNA3-203ENST00000558903 EPRSP07814 1512 aaKnown RBP9.29□□□□□ -0.92
CHRNA3-203ENST00000558903 CFAP74Q9C0B2 1584 aa9.29□□□□□ -0.92
CHRNA3-203ENST00000558903 KDM6BO15054 1643 aa9.28□□□□□ -0.92
CHRNA3-203ENST00000558903 CASKIN1Q8WXD9 1431 aa9.28□□□□□ -0.92
CHRNA3-203ENST00000558903 TEX14Q8IWB6 1497 aa9.28□□□□□ -0.92
CHRNA3-203ENST00000558903 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.92
CHRNA3-203ENST00000558903 PPRC1Q5VV67 1664 aaKnown RBP9.27□□□□□ -0.93
CHRNA3-203ENST00000558903 KCNH8Q96L42 1107 aa9.27□□□□□ -0.93
CHRNA3-203ENST00000558903 CDK11AQ9UQ88 783 aaPredicted RBP9.27□□□□□ -0.93
CHRNA3-203ENST00000558903 PLEKHD1A6NEE1 506 aa9.26□□□□□ -0.93
CHRNA3-203ENST00000558903 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
CHRNA3-203ENST00000558903 ITSN2Q9NZM3 1697 aa9.24□□□□□ -0.93
CHRNA3-203ENST00000558903 CD109Q6YHK3 1445 aa9.22□□□□□ -0.93
CHRNA3-203ENST00000558903 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
CHRNA3-203ENST00000558903 SUPT6HQ7KZ85 1726 aaKnown RBP9.22□□□□□ -0.93
CHRNA3-203ENST00000558903 EHBP1L1Q8N3D4 1523 aa9.22□□□□□ -0.93
CHRNA3-203ENST00000558903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.21□□□□□ -0.93
CHRNA3-203ENST00000558903 TIAM1Q13009 1591 aa9.21□□□□□ -0.93
CHRNA3-203ENST00000558903 PREX2Q70Z35 1606 aa9.21□□□□□ -0.93
CHRNA3-203ENST00000558903 FKBP8Q14318 412 aa9.21□□□□□ -0.94
CHRNA3-203ENST00000558903 CDC42BPAQ5VT25 1732 aa9.21□□□□□ -0.94
CHRNA3-203ENST00000558903 TROQ12816 1431 aaPredicted RBP9.21□□□□□ -0.94
CHRNA3-203ENST00000558903 MTUS2Q5JR59 1369 aa9.2□□□□□ -0.94
CHRNA3-203ENST00000558903 MAGI3Q5TCQ9 1506 aa9.2□□□□□ -0.94
CHRNA3-203ENST00000558903 ARHGAP5Q13017 1502 aa9.19□□□□□ -0.94
CHRNA3-203ENST00000558903 CDC42BPBQ9Y5S2 1711 aa9.18□□□□□ -0.94
CHRNA3-203ENST00000558903 FANCAO15360 1455 aa9.16□□□□□ -0.94
CHRNA3-203ENST00000558903 CAPN15O75808 1086 aa9.16□□□□□ -0.94
CHRNA3-203ENST00000558903 NEO1Q92859 1461 aa9.15□□□□□ -0.94
CHRNA3-203ENST00000558903 ARAP3Q8WWN8 1544 aa9.15□□□□□ -0.95
CHRNA3-203ENST00000558903 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
CHRNA3-203ENST00000558903 SPINK5Q9NQ38 1064 aaPredicted RBP9.14□□□□□ -0.95
CHRNA3-203ENST00000558903 ADGRL1O94910 1474 aa9.13□□□□□ -0.95
CHRNA3-203ENST00000558903 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
CHRNA3-203ENST00000558903 CCNB3Q8WWL7 1395 aa9.12□□□□□ -0.95
CHRNA3-203ENST00000558903 MAP3K1Q13233 1512 aa9.12□□□□□ -0.95
CHRNA3-203ENST00000558903 LRRC9Q6ZRR7 1453 aa9.11□□□□□ -0.95
CHRNA3-203ENST00000558903 ZBTB12Q9Y330 459 aaPredicted RBP9.11□□□□□ -0.95
CHRNA3-203ENST00000558903 PLCH2O75038 1416 aa9.11□□□□□ -0.95
CHRNA3-203ENST00000558903 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
CHRNA3-203ENST00000558903 DENND4BO75064 1496 aaPredicted RBP9.1□□□□□ -0.95
CHRNA3-203ENST00000558903 NCOA2Q15596 1464 aa9.1□□□□□ -0.95
CHRNA3-203ENST00000558903 EFCAB2Q5VUJ9 269 aa9.1□□□□□ -0.95
CHRNA3-203ENST00000558903 MYT1LQ9UL68 1186 aa9.1□□□□□ -0.95
CHRNA3-203ENST00000558903 ABCC1P33527 1531 aa9.1□□□□□ -0.95
CHRNA3-203ENST00000558903 FRMPD1Q5SYB0 1578 aa9.09□□□□□ -0.95
CHRNA3-203ENST00000558903 SAMD9LQ8IVG5 1584 aa9.09□□□□□ -0.95
CHRNA3-203ENST00000558903 HECW2Q9P2P5 1572 aa9.09□□□□□ -0.95
CHRNA3-203ENST00000558903 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
CHRNA3-203ENST00000558903 ARHGEF40Q8TER5 1519 aa9.08□□□□□ -0.96
CHRNA3-203ENST00000558903 SYCP2Q9BX26 1530 aa9.08□□□□□ -0.96
CHRNA3-203ENST00000558903 ZNF518AQ6AHZ1 1483 aa9.08□□□□□ -0.96
CHRNA3-203ENST00000558903 PLEKHH2Q8IVE3 1493 aa9.08□□□□□ -0.96
CHRNA3-203ENST00000558903 ZFYVE16Q7Z3T8 1539 aa9.07□□□□□ -0.96
CHRNA3-203ENST00000558903 POLA2Q14181 598 aa9.07□□□□□ -0.96
CHRNA3-203ENST00000558903 POGZQ7Z3K3 1410 aa9.06□□□□□ -0.96
CHRNA3-203ENST00000558903 SCAPERQ9BY12 1400 aa9.06□□□□□ -0.96
CHRNA3-203ENST00000558903 ZMYM4Q5VZL5 1548 aa9.06□□□□□ -0.96
CHRNA3-203ENST00000558903 GPATCH8Q9UKJ3 1502 aaKnown RBP9.06□□□□□ -0.96
CHRNA3-203ENST00000558903 CFDP1Q9UEE9 299 aaPredicted RBP9.06□□□□□ -0.96
CHRNA3-203ENST00000558903 CAMSAP2Q08AD1 1489 aa9.05□□□□□ -0.96
CHRNA3-203ENST00000558903 CROCC2H7BZ55 1655 aa9.04□□□□□ -0.96
CHRNA3-203ENST00000558903 ADGBQ8N7X0 1667 aa9.04□□□□□ -0.96
CHRNA3-203ENST00000558903 COL17A1Q9UMD9 1497 aaPredicted RBP9.04□□□□□ -0.96
CHRNA3-203ENST00000558903 PTPN23Q9H3S7 1636 aa9.04□□□□□ -0.96
CHRNA3-203ENST00000558903 KDM5CP41229 1560 aa9.03□□□□□ -0.96
CHRNA3-203ENST00000558903 RAPGEF3O95398 923 aa9.03□□□□□ -0.96
CHRNA3-203ENST00000558903 MYOM3Q5VTT5 1437 aa9.03□□□□□ -0.96
CHRNA3-203ENST00000558903 MAGI2Q86UL8 1455 aa9.02□□□□□ -0.96
CHRNA3-203ENST00000558903 ABCA6Q8N139 1617 aa9.02□□□□□ -0.96
CHRNA3-203ENST00000558903 FER1L4A9Z1Z3 1794 aa9.02□□□□□ -0.97
CHRNA3-203ENST00000558903 KIDINS220Q9ULH0 1771 aa9.01□□□□□ -0.97
CHRNA3-203ENST00000558903 ATP7AQ04656 1500 aa9.01□□□□□ -0.97
CHRNA3-203ENST00000558903 KANK4Q5T7N3 995 aaPredicted RBP9.01□□□□□ -0.97
CHRNA3-203ENST00000558903 INO80Q9ULG1 1556 aaPredicted RBP9.01□□□□□ -0.97
CHRNA3-203ENST00000558903 ARID4BQ4LE39 1312 aaPredicted RBP9.01□□□□□ -0.97
CHRNA3-203ENST00000558903 ARHGEF5Q12774 1597 aa9□□□□□ -0.97
CHRNA3-203ENST00000558903 DIP2CQ9Y2E4 1556 aa9□□□□□ -0.97
CHRNA3-203ENST00000558903 CCDC141Q6ZP82 1450 aa9□□□□□ -0.97
CHRNA3-203ENST00000558903 BCORL1Q5H9F3 1711 aa9□□□□□ -0.97
CHRNA3-203ENST00000558903 MIA2Q96PC5 1412 aa8.99□□□□□ -0.97
CHRNA3-203ENST00000558903 SPDYE4A6NLX3 237 aa8.99□□□□□ -0.97
CHRNA3-203ENST00000558903 MKRN4PQ13434 485 aaPredicted RBP8.99□□□□□ -0.97
CHRNA3-203ENST00000558903 RIMS1Q86UR5 1692 aaKnown RBP8.99□□□□□ -0.97
CHRNA3-203ENST00000558903 DNMT1P26358 1616 aaKnown RBP8.98□□□□□ -0.97
CHRNA3-203ENST00000558903 C9orf84Q5VXU9 1444 aa8.98□□□□□ -0.97
CHRNA3-203ENST00000558903 KIAA1107Q9UPP5 1409 aa8.98□□□□□ -0.97
CHRNA3-203ENST00000558903 TRAPPC8Q9Y2L5 1435 aa8.98□□□□□ -0.97
CHRNA3-203ENST00000558903 HNRNPMP52272 730 aaKnown RBP eCLIP8.98□□□□□ -0.97
CHRNA3-203ENST00000558903 ARHGEF12Q9NZN5 1544 aa8.98□□□□□ -0.97
CHRNA3-203ENST00000558903 SPAG9O60271 1321 aaKnown RBP8.98□□□□□ -0.97
CHRNA3-203ENST00000558903 FGD6Q6ZV73 1430 aa8.97□□□□□ -0.97
CHRNA3-203ENST00000558903 MLH3Q9UHC1 1453 aa8.97□□□□□ -0.97
CHRNA3-203ENST00000558903 AMER1Q5JTC6 1135 aaPredicted RBP8.97□□□□□ -0.97
CHRNA3-203ENST00000558903 PPARGC1BQ86YN6 1023 aaKnown RBP8.97□□□□□ -0.97
CHRNA3-203ENST00000558903 YEATS2Q9ULM3 1422 aa8.97□□□□□ -0.97
CHRNA3-203ENST00000558903 ATP10AO60312 1499 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms