RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
PBX1-213ENST00000558796 ARHGEF40Q8TER5 1519 aa17.6■□□□□ 0.41
PBX1-213ENST00000558796 ITSN2Q9NZM3 1697 aa17.59■□□□□ 0.41
PBX1-213ENST00000558796 TIAM1Q13009 1591 aa17.59■□□□□ 0.41
PBX1-213ENST00000558796 ZMYM4Q5VZL5 1548 aa17.58■□□□□ 0.41
PBX1-213ENST00000558796 AEBP2Q6ZN18 517 aaPredicted RBP17.58■□□□□ 0.4
PBX1-213ENST00000558796 MTUS2Q5JR59 1369 aa17.57■□□□□ 0.4
PBX1-213ENST00000558796 POGZQ7Z3K3 1410 aa17.56■□□□□ 0.4
PBX1-213ENST00000558796 ABCC1P33527 1531 aa17.56■□□□□ 0.4
PBX1-213ENST00000558796 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
PBX1-213ENST00000558796 SUPT6HQ7KZ85 1726 aaKnown RBP17.55■□□□□ 0.4
PBX1-213ENST00000558796 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
PBX1-213ENST00000558796 KDM4FA0A1W2PPD8 638 aa17.54■□□□□ 0.4
PBX1-213ENST00000558796 EFCAB2Q5VUJ9 269 aa17.54■□□□□ 0.4
PBX1-213ENST00000558796 SAMD9LQ8IVG5 1584 aa17.53■□□□□ 0.4
PBX1-213ENST00000558796 SIGLEC1Q9BZZ2 1709 aa17.53■□□□□ 0.4
PBX1-213ENST00000558796 KDM5CP41229 1560 aa17.51■□□□□ 0.39
PBX1-213ENST00000558796 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
PBX1-213ENST00000558796 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
PBX1-213ENST00000558796 HECW2Q9P2P5 1572 aa17.49■□□□□ 0.39
PBX1-213ENST00000558796 YEATS2Q9ULM3 1422 aa17.49■□□□□ 0.39
PBX1-213ENST00000558796 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
PBX1-213ENST00000558796 ARHGEF12Q9NZN5 1544 aa17.49■□□□□ 0.39
PBX1-213ENST00000558796 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
PBX1-213ENST00000558796 BCORL1Q5H9F3 1711 aa17.49■□□□□ 0.39
PBX1-213ENST00000558796 ADAMTSL3P82987 1691 aa17.46■□□□□ 0.39
PBX1-213ENST00000558796 NCOA2Q15596 1464 aa17.46■□□□□ 0.39
PBX1-213ENST00000558796 MAGI2Q86UL8 1455 aa17.46■□□□□ 0.39
PBX1-213ENST00000558796 ABCA6Q8N139 1617 aa17.46■□□□□ 0.39
PBX1-213ENST00000558796 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
PBX1-213ENST00000558796 MAP3K1Q13233 1512 aa17.45■□□□□ 0.38
PBX1-213ENST00000558796 KIDINS220Q9ULH0 1771 aa17.44■□□□□ 0.38
PBX1-213ENST00000558796 ZNF777Q9ULD5 760 aaPredicted RBP17.44■□□□□ 0.38
PBX1-213ENST00000558796 TRAPPC8Q9Y2L5 1435 aa17.44■□□□□ 0.38
PBX1-213ENST00000558796 DIP2CQ9Y2E4 1556 aa17.44■□□□□ 0.38
PBX1-213ENST00000558796 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
PBX1-213ENST00000558796 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
PBX1-213ENST00000558796 CFDP1Q9UEE9 299 aaPredicted RBP17.41■□□□□ 0.38
PBX1-213ENST00000558796 RIMS1Q86UR5 1692 aaKnown RBP17.41■□□□□ 0.38
PBX1-213ENST00000558796 FER1L4A9Z1Z3 1794 aa17.4■□□□□ 0.38
PBX1-213ENST00000558796 ARID4BQ4LE39 1312 aaPredicted RBP17.4■□□□□ 0.38
PBX1-213ENST00000558796 PLEKHH2Q8IVE3 1493 aa17.39■□□□□ 0.37
PBX1-213ENST00000558796 INO80Q9ULG1 1556 aaPredicted RBP17.39■□□□□ 0.37
PBX1-213ENST00000558796 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
PBX1-213ENST00000558796 ATP10AO60312 1499 aa17.38■□□□□ 0.37
PBX1-213ENST00000558796 MLH3Q9UHC1 1453 aa17.37■□□□□ 0.37
PBX1-213ENST00000558796 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
PBX1-213ENST00000558796 MYT1LQ9UL68 1186 aa17.37■□□□□ 0.37
PBX1-213ENST00000558796 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
PBX1-213ENST00000558796 KIAA1107Q9UPP5 1409 aa17.36■□□□□ 0.37
PBX1-213ENST00000558796 ATP7AQ04656 1500 aa17.36■□□□□ 0.37
PBX1-213ENST00000558796 REREQ9P2R6 1566 aa17.36■□□□□ 0.37
PBX1-213ENST00000558796 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
PBX1-213ENST00000558796 ZNF644Q9H582 1327 aaPredicted RBP17.35■□□□□ 0.37
PBX1-213ENST00000558796 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
PBX1-213ENST00000558796 APLP2Q06481 763 aa17.32■□□□□ 0.36
PBX1-213ENST00000558796 PTPRMP28827 1452 aa17.31■□□□□ 0.36
PBX1-213ENST00000558796 MBD5Q9P267 1494 aa17.31■□□□□ 0.36
PBX1-213ENST00000558796 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
PBX1-213ENST00000558796 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
PBX1-213ENST00000558796 MLECQ14165 292 aa17.29■□□□□ 0.36
PBX1-213ENST00000558796 CCDC141Q6ZP82 1450 aa17.29■□□□□ 0.36
PBX1-213ENST00000558796 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
PBX1-213ENST00000558796 PLXNC1O60486 1568 aa17.27■□□□□ 0.35
PBX1-213ENST00000558796 AGLP35573 1532 aa17.26■□□□□ 0.35
PBX1-213ENST00000558796 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
PBX1-213ENST00000558796 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
PBX1-213ENST00000558796 MIA2Q96PC5 1412 aa17.23■□□□□ 0.35
PBX1-213ENST00000558796 A2MP01023 1474 aa17.22■□□□□ 0.35
PBX1-213ENST00000558796 C3P01024 1663 aa17.21■□□□□ 0.35
PBX1-213ENST00000558796 MAST1Q9Y2H9 1570 aa17.2■□□□□ 0.34
PBX1-213ENST00000558796 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
PBX1-213ENST00000558796 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
PBX1-213ENST00000558796 FGD6Q6ZV73 1430 aa17.19■□□□□ 0.34
PBX1-213ENST00000558796 CLTCQ00610 1675 aaKnown RBP17.19■□□□□ 0.34
PBX1-213ENST00000558796 DNMT1P26358 1616 aaKnown RBP17.18■□□□□ 0.34
PBX1-213ENST00000558796 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
PBX1-213ENST00000558796 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
PBX1-213ENST00000558796 TCOF1Q13428 1488 aaKnown RBP17.15■□□□□ 0.34
PBX1-213ENST00000558796 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
PBX1-213ENST00000558796 LMTK3Q96Q04 1460 aa17.12■□□□□ 0.33
PBX1-213ENST00000558796 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
PBX1-213ENST00000558796 TSPY4P0CV99 314 aa17.11■□□□□ 0.33
PBX1-213ENST00000558796 TSPY10P0CW01 314 aa17.11■□□□□ 0.33
PBX1-213ENST00000558796 SETD1BQ9UPS6 1966 aaKnown RBP17.11■□□□□ 0.33
PBX1-213ENST00000558796 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
PBX1-213ENST00000558796 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
PBX1-213ENST00000558796 ABCC5O15440 1437 aa17.1■□□□□ 0.33
PBX1-213ENST00000558796 DAPK1P53355 1430 aa17.1■□□□□ 0.33
PBX1-213ENST00000558796 CEBPAP49715 358 aaPredicted RBP17.09■□□□□ 0.33
PBX1-213ENST00000558796 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
PBX1-213ENST00000558796 CNTLNQ9NXG0 1405 aa17.09■□□□□ 0.33
PBX1-213ENST00000558796 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
PBX1-213ENST00000558796 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.32
PBX1-213ENST00000558796 GGT6Q6P531 493 aa17.06■□□□□ 0.32
PBX1-213ENST00000558796 CEP152O94986 1710 aa17.06■□□□□ 0.32
PBX1-213ENST00000558796 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
PBX1-213ENST00000558796 KDM5DQ9BY66 1539 aa17.05■□□□□ 0.32
PBX1-213ENST00000558796 KIF3BO15066 747 aa17.04■□□□□ 0.32
PBX1-213ENST00000558796 ZC3H13Q5T200 1668 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms