RNA–Protein interactions for RNA: ENST00000558488.1

RNF213-206, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-206ENST00000558488 GPATCH8Q9UKJ3 1502 aaKnown RBP27.72■■■□□ 2.03
RNF213-206ENST00000558488 PREX2Q70Z35 1606 aa27.72■■■□□ 2.03
RNF213-206ENST00000558488 MYOM3Q5VTT5 1437 aa27.72■■■□□ 2.03
RNF213-206ENST00000558488 MYO5CQ9NQX4 1742 aa27.72■■■□□ 2.03
RNF213-206ENST00000558488 PHLDB1Q86UU1 1377 aa27.71■■■□□ 2.03
RNF213-206ENST00000558488 PLCH2O75038 1416 aa27.7■■■□□ 2.03
RNF213-206ENST00000558488 CDC42BPAQ5VT25 1732 aa27.7■■■□□ 2.02
RNF213-206ENST00000558488 PPARGC1BQ86YN6 1023 aaKnown RBP27.69■■■□□ 2.02
RNF213-206ENST00000558488 CD109Q6YHK3 1445 aa27.68■■■□□ 2.02
RNF213-206ENST00000558488 MIA2Q96PC5 1412 aa27.68■■■□□ 2.02
RNF213-206ENST00000558488 CDC42BPBQ9Y5S2 1711 aa27.62■■■□□ 2.01
RNF213-206ENST00000558488 FGD6Q6ZV73 1430 aa27.62■■■□□ 2.01
RNF213-206ENST00000558488 CFAP74Q9C0B2 1584 aa27.61■■■□□ 2.01
RNF213-206ENST00000558488 ADAMTSL3P82987 1691 aa27.61■■■□□ 2.01
RNF213-206ENST00000558488 ARHGAP5Q13017 1502 aa27.61■■■□□ 2.01
RNF213-206ENST00000558488 RRBP1Q9P2E9 1410 aaKnown RBP27.59■■■□□ 2.01
RNF213-206ENST00000558488 CFDP1Q9UEE9 299 aaPredicted RBP27.59■■■□□ 2.01
RNF213-206ENST00000558488 PTPRMP28827 1452 aa27.57■■■□□ 2
RNF213-206ENST00000558488 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
RNF213-206ENST00000558488 FANCAO15360 1455 aa27.57■■■□□ 2
RNF213-206ENST00000558488 NEO1Q92859 1461 aa27.57■■■□□ 2
RNF213-206ENST00000558488 EFCAB2Q5VUJ9 269 aa27.56■■■□□ 2
RNF213-206ENST00000558488 PLEKHH2Q8IVE3 1493 aa27.54■■■□□ 2
RNF213-206ENST00000558488 PTPN23Q9H3S7 1636 aa27.54■■■□□ 2
RNF213-206ENST00000558488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.54■■■□□ 2
RNF213-206ENST00000558488 SAMD9LQ8IVG5 1584 aa27.52■■■□□ 2
RNF213-206ENST00000558488 CAMSAP2Q08AD1 1489 aa27.51■■■□□ 2
RNF213-206ENST00000558488 KIAA1107Q9UPP5 1409 aa27.5■■□□□ 1.99
RNF213-206ENST00000558488 ABCC1P33527 1531 aa27.49■■□□□ 1.99
RNF213-206ENST00000558488 AKNAQ7Z591 1439 aa27.47■■□□□ 1.99
RNF213-206ENST00000558488 MADDQ8WXG6 1647 aa27.45■■□□□ 1.99
RNF213-206ENST00000558488 BCORL1Q5H9F3 1711 aa27.45■■□□□ 1.99
RNF213-206ENST00000558488 LMTK3Q96Q04 1460 aa27.44■■□□□ 1.98
RNF213-206ENST00000558488 ARHGEF5Q12774 1597 aa27.42■■□□□ 1.98
RNF213-206ENST00000558488 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
RNF213-206ENST00000558488 SYCP2Q9BX26 1530 aa27.41■■□□□ 1.98
RNF213-206ENST00000558488 FRMPD1Q5SYB0 1578 aa27.4■■□□□ 1.98
RNF213-206ENST00000558488 RAPGEF3O95398 923 aa27.4■■□□□ 1.98
RNF213-206ENST00000558488 ZNF644Q9H582 1327 aaPredicted RBP27.4■■□□□ 1.98
RNF213-206ENST00000558488 MBD5Q9P267 1494 aa27.39■■□□□ 1.98
RNF213-206ENST00000558488 RSPH4AQ5TD94 716 aa27.38■■□□□ 1.97
RNF213-206ENST00000558488 DNMT1P26358 1616 aaKnown RBP27.37■■□□□ 1.97
RNF213-206ENST00000558488 SCAPERQ9BY12 1400 aa27.36■■□□□ 1.97
RNF213-206ENST00000558488 FAM50AQ14320 339 aaKnown RBP27.36■■□□□ 1.97
RNF213-206ENST00000558488 ARHGEF12Q9NZN5 1544 aa27.36■■□□□ 1.97
RNF213-206ENST00000558488 CCDC141Q6ZP82 1450 aa27.35■■□□□ 1.97
RNF213-206ENST00000558488 RIMS1Q86UR5 1692 aaKnown RBP27.34■■□□□ 1.97
RNF213-206ENST00000558488 POGZQ7Z3K3 1410 aa27.33■■□□□ 1.97
RNF213-206ENST00000558488 DENND4BO75064 1496 aaPredicted RBP27.33■■□□□ 1.97
RNF213-206ENST00000558488 ZNF518AQ6AHZ1 1483 aa27.32■■□□□ 1.96
RNF213-206ENST00000558488 SHANK2Q9UPX8 1470 aa27.32■■□□□ 1.96
RNF213-206ENST00000558488 DAPK1P53355 1430 aa27.32■■□□□ 1.96
RNF213-206ENST00000558488 TRIM26Q12899 539 aaPredicted RBP27.31■■□□□ 1.96
RNF213-206ENST00000558488 HSPA2P54652 639 aa27.3■■□□□ 1.96
RNF213-206ENST00000558488 ABCC5O15440 1437 aa27.3■■□□□ 1.96
RNF213-206ENST00000558488 CROCC2H7BZ55 1655 aa27.3■■□□□ 1.96
RNF213-206ENST00000558488 KDM5CP41229 1560 aa27.29■■□□□ 1.96
RNF213-206ENST00000558488 TRAPPC8Q9Y2L5 1435 aa27.28■■□□□ 1.96
RNF213-206ENST00000558488 HNRNPMP52272 730 aaKnown RBP eCLIP27.28■■□□□ 1.96
RNF213-206ENST00000558488 MAST1Q9Y2H9 1570 aa27.27■■□□□ 1.96
RNF213-206ENST00000558488 RICTORQ6R327 1708 aa27.27■■□□□ 1.96
RNF213-206ENST00000558488 SIGLEC1Q9BZZ2 1709 aa27.27■■□□□ 1.96
RNF213-206ENST00000558488 ZMYM4Q5VZL5 1548 aa27.25■■□□□ 1.95
RNF213-206ENST00000558488 ARID4BQ4LE39 1312 aaPredicted RBP27.24■■□□□ 1.95
RNF213-206ENST00000558488 ILDR2Q71H61 639 aa27.22■■□□□ 1.95
RNF213-206ENST00000558488 RTEL1-TNFRSF6BF6WH68 1400 aa27.22■■□□□ 1.95
RNF213-206ENST00000558488 C9orf84Q5VXU9 1444 aa27.21■■□□□ 1.95
RNF213-206ENST00000558488 ARHGEF40Q8TER5 1519 aa27.21■■□□□ 1.95
RNF213-206ENST00000558488 ADGRL2O95490 1459 aa27.2■■□□□ 1.95
RNF213-206ENST00000558488 MLH3Q9UHC1 1453 aa27.2■■□□□ 1.95
RNF213-206ENST00000558488 TSPY4P0CV99 314 aa27.2■■□□□ 1.94
RNF213-206ENST00000558488 TSPY10P0CW01 314 aa27.2■■□□□ 1.94
RNF213-206ENST00000558488 INO80Q9ULG1 1556 aaPredicted RBP27.2■■□□□ 1.94
RNF213-206ENST00000558488 MAGI2Q86UL8 1455 aa27.19■■□□□ 1.94
RNF213-206ENST00000558488 PTPRKQ15262 1439 aa27.18■■□□□ 1.94
RNF213-206ENST00000558488 ZFYVE16Q7Z3T8 1539 aa27.18■■□□□ 1.94
RNF213-206ENST00000558488 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
RNF213-206ENST00000558488 ROCK1Q13464 1354 aa27.18■■□□□ 1.94
RNF213-206ENST00000558488 PLPPR3Q6T4P5 718 aa27.17■■□□□ 1.94
RNF213-206ENST00000558488 ADGBQ8N7X0 1667 aa27.17■■□□□ 1.94
RNF213-206ENST00000558488 SPAG9O60271 1321 aaKnown RBP27.16■■□□□ 1.94
RNF213-206ENST00000558488 CERKQ8TCT0 537 aa27.16■■□□□ 1.94
RNF213-206ENST00000558488 ATP7AQ04656 1500 aa27.16■■□□□ 1.94
RNF213-206ENST00000558488 PLXNC1O60486 1568 aa27.15■■□□□ 1.94
RNF213-206ENST00000558488 ANKRD30AQ9BXX3 1397 aa27.12■■□□□ 1.93
RNF213-206ENST00000558488 KIDINS220Q9ULH0 1771 aa27.1■■□□□ 1.93
RNF213-206ENST00000558488 NCOA1Q15788 1441 aa27.1■■□□□ 1.93
RNF213-206ENST00000558488 ITGAEP38570 1179 aa27.1■■□□□ 1.93
RNF213-206ENST00000558488 HFM1A2PYH4 1435 aa27.06■■□□□ 1.92
RNF213-206ENST00000558488 YEATS2Q9ULM3 1422 aa27.05■■□□□ 1.92
RNF213-206ENST00000558488 DISP3Q9P2K9 1392 aa27.04■■□□□ 1.92
RNF213-206ENST00000558488 DIP2CQ9Y2E4 1556 aa27.04■■□□□ 1.92
RNF213-206ENST00000558488 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
RNF213-206ENST00000558488 GCC2Q8IWJ2 1684 aa27.03■■□□□ 1.92
RNF213-206ENST00000558488 ABCA6Q8N139 1617 aa27.03■■□□□ 1.92
RNF213-206ENST00000558488 KIF15Q9NS87 1388 aa27.03■■□□□ 1.92
RNF213-206ENST00000558488 CHIC2Q9UKJ5 165 aa27.03■■□□□ 1.92
RNF213-206ENST00000558488 DUOX2Q9NRD8 1548 aa27.02■■□□□ 1.92
RNF213-206ENST00000558488 REREQ9P2R6 1566 aa27.01■■□□□ 1.92
RNF213-206ENST00000558488 SOCS7O14512 581 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms