RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 RICTORQ6R327 1708 aa19.81■□□□□ 0.76
CDC42BPB-202ENST00000558321 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
CDC42BPB-202ENST00000558321 POGZQ7Z3K3 1410 aa19.78■□□□□ 0.76
CDC42BPB-202ENST00000558321 AFAP1Q8N556 730 aa19.77■□□□□ 0.76
CDC42BPB-202ENST00000558321 MAGI2Q86UL8 1455 aa19.77■□□□□ 0.76
CDC42BPB-202ENST00000558321 ZFYVE16Q7Z3T8 1539 aa19.76■□□□□ 0.75
CDC42BPB-202ENST00000558321 ARHGEF40Q8TER5 1519 aa19.76■□□□□ 0.75
CDC42BPB-202ENST00000558321 YEATS2Q9ULM3 1422 aa19.76■□□□□ 0.75
CDC42BPB-202ENST00000558321 ZNF777Q9ULD5 760 aaPredicted RBP19.75■□□□□ 0.75
CDC42BPB-202ENST00000558321 ZMYM4Q5VZL5 1548 aa19.75■□□□□ 0.75
CDC42BPB-202ENST00000558321 MTUS2Q5JR59 1369 aa19.74■□□□□ 0.75
CDC42BPB-202ENST00000558321 MLECQ14165 292 aa19.72■□□□□ 0.75
CDC42BPB-202ENST00000558321 ZNF518AQ6AHZ1 1483 aa19.72■□□□□ 0.75
CDC42BPB-202ENST00000558321 ADAMTSL3P82987 1691 aa19.69■□□□□ 0.74
CDC42BPB-202ENST00000558321 PTPRMP28827 1452 aa19.69■□□□□ 0.74
CDC42BPB-202ENST00000558321 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
CDC42BPB-202ENST00000558321 CCNB3Q8WWL7 1395 aa19.69■□□□□ 0.74
CDC42BPB-202ENST00000558321 BCORL1Q5H9F3 1711 aa19.68■□□□□ 0.74
CDC42BPB-202ENST00000558321 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
CDC42BPB-202ENST00000558321 ATP10AO60312 1499 aa19.68■□□□□ 0.74
CDC42BPB-202ENST00000558321 PREX2Q70Z35 1606 aa19.68■□□□□ 0.74
CDC42BPB-202ENST00000558321 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
CDC42BPB-202ENST00000558321 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
CDC42BPB-202ENST00000558321 TRAPPC8Q9Y2L5 1435 aa19.65■□□□□ 0.74
CDC42BPB-202ENST00000558321 HNRNPMP52272 730 aaKnown RBP eCLIP19.64■□□□□ 0.739e-7■■■■□ 20.9
CDC42BPB-202ENST00000558321 C9orf84Q5VXU9 1444 aa19.64■□□□□ 0.73
CDC42BPB-202ENST00000558321 CDC42BPAQ5VT25 1732 aa19.63■□□□□ 0.73
CDC42BPB-202ENST00000558321 MADDQ8WXG6 1647 aa19.63■□□□□ 0.73
CDC42BPB-202ENST00000558321 HECW2Q9P2P5 1572 aa19.63■□□□□ 0.73
CDC42BPB-202ENST00000558321 ARHGEF12Q9NZN5 1544 aa19.63■□□□□ 0.73
CDC42BPB-202ENST00000558321 ABCC1P33527 1531 aa19.62■□□□□ 0.73
CDC42BPB-202ENST00000558321 KDM5CP41229 1560 aa19.61■□□□□ 0.73
CDC42BPB-202ENST00000558321 MLH3Q9UHC1 1453 aa19.6■□□□□ 0.73
CDC42BPB-202ENST00000558321 SPAG9O60271 1321 aaKnown RBP19.58■□□□□ 0.73
CDC42BPB-202ENST00000558321 EHBP1L1Q8N3D4 1523 aa19.58■□□□□ 0.73
CDC42BPB-202ENST00000558321 SIGLEC1Q9BZZ2 1709 aa19.58■□□□□ 0.72
CDC42BPB-202ENST00000558321 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.72
CDC42BPB-202ENST00000558321 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.72
CDC42BPB-202ENST00000558321 PLEKHH2Q8IVE3 1493 aa19.57■□□□□ 0.72
CDC42BPB-202ENST00000558321 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
CDC42BPB-202ENST00000558321 SAMD9LQ8IVG5 1584 aa19.56■□□□□ 0.72
CDC42BPB-202ENST00000558321 KIAA1107Q9UPP5 1409 aa19.55■□□□□ 0.72
CDC42BPB-202ENST00000558321 SYCP2Q9BX26 1530 aa19.55■□□□□ 0.72
CDC42BPB-202ENST00000558321 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
CDC42BPB-202ENST00000558321 DIP2CQ9Y2E4 1556 aa19.54■□□□□ 0.72
CDC42BPB-202ENST00000558321 ESF1Q9H501 851 aaKnown RBP19.54■□□□□ 0.72
CDC42BPB-202ENST00000558321 TIAM1Q13009 1591 aa19.51■□□□□ 0.71
CDC42BPB-202ENST00000558321 ABCA6Q8N139 1617 aa19.51■□□□□ 0.71
CDC42BPB-202ENST00000558321 CEBPAP49715 358 aaPredicted RBP19.5■□□□□ 0.71
CDC42BPB-202ENST00000558321 APLP2Q06481 763 aa19.5■□□□□ 0.71
CDC42BPB-202ENST00000558321 NCOA2Q15596 1464 aa19.49■□□□□ 0.71
CDC42BPB-202ENST00000558321 FER1L4A9Z1Z3 1794 aa19.49■□□□□ 0.71
CDC42BPB-202ENST00000558321 REREQ9P2R6 1566 aa19.49■□□□□ 0.71
CDC42BPB-202ENST00000558321 KIDINS220Q9ULH0 1771 aa19.48■□□□□ 0.71
CDC42BPB-202ENST00000558321 SUPT6HQ7KZ85 1726 aaKnown RBP19.48■□□□□ 0.71
CDC42BPB-202ENST00000558321 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
CDC42BPB-202ENST00000558321 LRRC9Q6ZRR7 1453 aa19.46■□□□□ 0.71
CDC42BPB-202ENST00000558321 AGLP35573 1532 aa19.46■□□□□ 0.71
CDC42BPB-202ENST00000558321 HSPA2P54652 639 aa19.44■□□□□ 0.7
CDC42BPB-202ENST00000558321 ATP7AQ04656 1500 aa19.44■□□□□ 0.7
CDC42BPB-202ENST00000558321 LMTK3Q96Q04 1460 aa19.43■□□□□ 0.7
CDC42BPB-202ENST00000558321 RSPH4AQ5TD94 716 aa19.43■□□□□ 0.7
CDC42BPB-202ENST00000558321 MBD5Q9P267 1494 aa19.42■□□□□ 0.7
CDC42BPB-202ENST00000558321 A2MP01023 1474 aa19.41■□□□□ 0.7
CDC42BPB-202ENST00000558321 MAP3K1Q13233 1512 aa19.41■□□□□ 0.7
CDC42BPB-202ENST00000558321 TSPY4P0CV99 314 aa19.4■□□□□ 0.7
CDC42BPB-202ENST00000558321 TSPY10P0CW01 314 aa19.4■□□□□ 0.7
CDC42BPB-202ENST00000558321 GGT6Q6P531 493 aa19.4■□□□□ 0.7
CDC42BPB-202ENST00000558321 CAMSAP2Q08AD1 1489 aa19.4■□□□□ 0.7
CDC42BPB-202ENST00000558321 INO80Q9ULG1 1556 aaPredicted RBP19.38■□□□□ 0.69
CDC42BPB-202ENST00000558321 RTEL1-TNFRSF6BF6WH68 1400 aa19.37■□□□□ 0.69
CDC42BPB-202ENST00000558321 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
CDC42BPB-202ENST00000558321 CCDC141Q6ZP82 1450 aa19.36■□□□□ 0.69
CDC42BPB-202ENST00000558321 DHX29Q7Z478 1369 aaKnown RBP19.33■□□□□ 0.69
CDC42BPB-202ENST00000558321 UHRF1BP1Q6BDS2 1440 aa19.33■□□□□ 0.68
CDC42BPB-202ENST00000558321 ZMYM3Q14202 1370 aa19.32■□□□□ 0.68
CDC42BPB-202ENST00000558321 KIF3BO15066 747 aa19.32■□□□□ 0.68
CDC42BPB-202ENST00000558321 MYOM3Q5VTT5 1437 aa19.32■□□□□ 0.68
CDC42BPB-202ENST00000558321 ILDR1Q86SU0 546 aaPredicted RBP19.31■□□□□ 0.68
CDC42BPB-202ENST00000558321 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
CDC42BPB-202ENST00000558321 PLXNC1O60486 1568 aa19.31■□□□□ 0.68
CDC42BPB-202ENST00000558321 ADGBQ8N7X0 1667 aa19.3■□□□□ 0.68
CDC42BPB-202ENST00000558321 MIA2Q96PC5 1412 aa19.3■□□□□ 0.68
CDC42BPB-202ENST00000558321 C3P01024 1663 aa19.3■□□□□ 0.68
CDC42BPB-202ENST00000558321 PREX1Q8TCU6 1659 aa19.29■□□□□ 0.68
CDC42BPB-202ENST00000558321 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.68
CDC42BPB-202ENST00000558321 SETD1BQ9UPS6 1966 aaKnown RBP19.26■□□□□ 0.67
CDC42BPB-202ENST00000558321 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
CDC42BPB-202ENST00000558321 NPATQ14207 1427 aa19.23■□□□□ 0.67
CDC42BPB-202ENST00000558321 MROH2AA6NES4 1674 aa19.23■□□□□ 0.67
CDC42BPB-202ENST00000558321 CLTCQ00610 1675 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-202ENST00000558321 WASHC2CQ9Y4E1 1318 aa19.23■□□□□ 0.67
CDC42BPB-202ENST00000558321 PTPRKQ15262 1439 aa19.17■□□□□ 0.66
CDC42BPB-202ENST00000558321 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
CDC42BPB-202ENST00000558321 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
CDC42BPB-202ENST00000558321 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
CDC42BPB-202ENST00000558321 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
CDC42BPB-202ENST00000558321 FBXO41Q8TF61 875 aa19.16■□□□□ 0.66
CDC42BPB-202ENST00000558321 FBXO31Q5XUX0 539 aaPredicted RBP19.15■□□□□ 0.66
CDC42BPB-202ENST00000558321 ABCC5O15440 1437 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms