RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZFYVE16Q7Z3T8 1539 aa25.25■■□□□ 1.63
TPM1-211ENST00000558314 BCORL1Q5H9F3 1711 aa25.25■■□□□ 1.63
TPM1-211ENST00000558314 MYO5CQ9NQX4 1742 aa25.24■■□□□ 1.63
TPM1-211ENST00000558314 MADDQ8WXG6 1647 aa25.23■■□□□ 1.63
TPM1-211ENST00000558314 PCF11O94913 1555 aaKnown RBP25.22■■□□□ 1.63
TPM1-211ENST00000558314 ARHGAP5Q13017 1502 aa25.22■■□□□ 1.63
TPM1-211ENST00000558314 POGZQ7Z3K3 1410 aa25.22■■□□□ 1.63
TPM1-211ENST00000558314 LRRIQ1Q96JM4 1722 aa25.22■■□□□ 1.63
TPM1-211ENST00000558314 ZMYM4Q5VZL5 1548 aa25.2■■□□□ 1.62
TPM1-211ENST00000558314 CASKIN1Q8WXD9 1431 aa25.2■■□□□ 1.62
TPM1-211ENST00000558314 RIMS1Q86UR5 1692 aaKnown RBP25.17■■□□□ 1.62
TPM1-211ENST00000558314 MAGI2Q86UL8 1455 aa25.16■■□□□ 1.62
TPM1-211ENST00000558314 ILDR1Q86SU0 546 aaPredicted RBP25.16■■□□□ 1.62
TPM1-211ENST00000558314 CCDC18Q5T9S5 1454 aa25.15■■□□□ 1.62
TPM1-211ENST00000558314 AFAP1Q8N556 730 aa25.15■■□□□ 1.62
TPM1-211ENST00000558314 SIGLEC1Q9BZZ2 1709 aa25.11■■□□□ 1.61
TPM1-211ENST00000558314 ATP10AO60312 1499 aa25.09■■□□□ 1.61
TPM1-211ENST00000558314 FYCO1Q9BQS8 1478 aa25.09■■□□□ 1.61
TPM1-211ENST00000558314 ZNF777Q9ULD5 760 aaPredicted RBP25.09■■□□□ 1.61
TPM1-211ENST00000558314 ZNF518AQ6AHZ1 1483 aa25.09■■□□□ 1.61
TPM1-211ENST00000558314 C9orf84Q5VXU9 1444 aa25.07■■□□□ 1.6
TPM1-211ENST00000558314 CDC42BPBQ9Y5S2 1711 aa25.05■■□□□ 1.6
TPM1-211ENST00000558314 PREX2Q70Z35 1606 aa25.02■■□□□ 1.6
TPM1-211ENST00000558314 HSPA2P54652 639 aa25.02■■□□□ 1.6
TPM1-211ENST00000558314 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
TPM1-211ENST00000558314 TRAPPC8Q9Y2L5 1435 aa25■■□□□ 1.59
TPM1-211ENST00000558314 LMTK3Q96Q04 1460 aa24.99■■□□□ 1.59
TPM1-211ENST00000558314 KDM5CP41229 1560 aa24.98■■□□□ 1.59
TPM1-211ENST00000558314 ABCC1P33527 1531 aa24.97■■□□□ 1.59
TPM1-211ENST00000558314 ARHGEF12Q9NZN5 1544 aa24.97■■□□□ 1.59
TPM1-211ENST00000558314 CEBPAP49715 358 aaPredicted RBP24.97■■□□□ 1.59
TPM1-211ENST00000558314 CDC42BPAQ5VT25 1732 aa24.95■■□□□ 1.59
TPM1-211ENST00000558314 MTUS2Q5JR59 1369 aa24.95■■□□□ 1.59
TPM1-211ENST00000558314 DIP2CQ9Y2E4 1556 aa24.94■■□□□ 1.58
TPM1-211ENST00000558314 ITSN2Q9NZM3 1697 aa24.94■■□□□ 1.58
TPM1-211ENST00000558314 HNRNPMP52272 730 aaKnown RBP eCLIP24.93■■□□□ 1.58
TPM1-211ENST00000558314 CCNB3Q8WWL7 1395 aa24.93■■□□□ 1.58
TPM1-211ENST00000558314 ESF1Q9H501 851 aaKnown RBP24.92■■□□□ 1.58
TPM1-211ENST00000558314 CFDP1Q9UEE9 299 aaPredicted RBP24.92■■□□□ 1.58
TPM1-211ENST00000558314 ABCA6Q8N139 1617 aa24.92■■□□□ 1.58
TPM1-211ENST00000558314 MLH3Q9UHC1 1453 aa24.91■■□□□ 1.58
TPM1-211ENST00000558314 CEP162Q5TB80 1403 aa24.91■■□□□ 1.58
TPM1-211ENST00000558314 GPATCH8Q9UKJ3 1502 aaKnown RBP24.91■■□□□ 1.58
TPM1-211ENST00000558314 SYCP2Q9BX26 1530 aa24.88■■□□□ 1.57
TPM1-211ENST00000558314 SAMD9LQ8IVG5 1584 aa24.87■■□□□ 1.57
TPM1-211ENST00000558314 SPAG9O60271 1321 aaKnown RBP24.86■■□□□ 1.57
TPM1-211ENST00000558314 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.57
TPM1-211ENST00000558314 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
TPM1-211ENST00000558314 REREQ9P2R6 1566 aa24.81■■□□□ 1.56
TPM1-211ENST00000558314 ZNF644Q9H582 1327 aaPredicted RBP24.79■■□□□ 1.56
TPM1-211ENST00000558314 PLEKHH2Q8IVE3 1493 aa24.77■■□□□ 1.56
TPM1-211ENST00000558314 EHBP1L1Q8N3D4 1523 aa24.77■■□□□ 1.56
TPM1-211ENST00000558314 FBXO41Q8TF61 875 aa24.77■■□□□ 1.56
TPM1-211ENST00000558314 AGLP35573 1532 aa24.76■■□□□ 1.55
TPM1-211ENST00000558314 PREX1Q8TCU6 1659 aa24.75■■□□□ 1.55
TPM1-211ENST00000558314 UHRF1BP1Q6BDS2 1440 aa24.75■■□□□ 1.55
TPM1-211ENST00000558314 KIAA1107Q9UPP5 1409 aa24.74■■□□□ 1.55
TPM1-211ENST00000558314 TIAM1Q13009 1591 aa24.74■■□□□ 1.55
TPM1-211ENST00000558314 SUPT6HQ7KZ85 1726 aaKnown RBP24.73■■□□□ 1.55
TPM1-211ENST00000558314 ATP7AQ04656 1500 aa24.73■■□□□ 1.55
TPM1-211ENST00000558314 GGT6Q6P531 493 aa24.71■■□□□ 1.55
TPM1-211ENST00000558314 C3P01024 1663 aa24.7■■□□□ 1.54
TPM1-211ENST00000558314 A2MP01023 1474 aa24.68■■□□□ 1.54
TPM1-211ENST00000558314 CNTLNQ9NXG0 1405 aa24.68■■□□□ 1.54
TPM1-211ENST00000558314 INO80Q9ULG1 1556 aaPredicted RBP24.67■■□□□ 1.54
TPM1-211ENST00000558314 NCOA2Q15596 1464 aa24.65■■□□□ 1.54
TPM1-211ENST00000558314 SETD1BQ9UPS6 1966 aaKnown RBP24.62■■□□□ 1.53
TPM1-211ENST00000558314 ZMYM3Q14202 1370 aa24.62■■□□□ 1.53
TPM1-211ENST00000558314 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
TPM1-211ENST00000558314 CERKQ8TCT0 537 aa24.61■■□□□ 1.53
TPM1-211ENST00000558314 DMRT2Q9Y5R5 561 aa24.61■■□□□ 1.53
TPM1-211ENST00000558314 MBD5Q9P267 1494 aa24.61■■□□□ 1.53
TPM1-211ENST00000558314 CAMSAP2Q08AD1 1489 aa24.59■■□□□ 1.53
TPM1-211ENST00000558314 CLTCQ00610 1675 aaKnown RBP24.59■■□□□ 1.53
TPM1-211ENST00000558314 PLXNC1O60486 1568 aa24.58■■□□□ 1.52
TPM1-211ENST00000558314 ADGBQ8N7X0 1667 aa24.56■■□□□ 1.52
TPM1-211ENST00000558314 STRCQ7RTU9 1775 aa24.55■■□□□ 1.52
TPM1-211ENST00000558314 CCDC141Q6ZP82 1450 aa24.55■■□□□ 1.52
TPM1-211ENST00000558314 KIF3BO15066 747 aa24.54■■□□□ 1.52
TPM1-211ENST00000558314 RTEL1-TNFRSF6BF6WH68 1400 aa24.53■■□□□ 1.52
TPM1-211ENST00000558314 MROH2AA6NES4 1674 aa24.53■■□□□ 1.52
TPM1-211ENST00000558314 LRRC9Q6ZRR7 1453 aa24.53■■□□□ 1.52
TPM1-211ENST00000558314 KANK4Q5T7N3 995 aaPredicted RBP24.53■■□□□ 1.52
TPM1-211ENST00000558314 TSPY4P0CV99 314 aa24.52■■□□□ 1.52
TPM1-211ENST00000558314 TSPY10P0CW01 314 aa24.52■■□□□ 1.52
TPM1-211ENST00000558314 DHX29Q7Z478 1369 aaKnown RBP24.52■■□□□ 1.52
TPM1-211ENST00000558314 NPATQ14207 1427 aa24.52■■□□□ 1.52
TPM1-211ENST00000558314 RSPH4AQ5TD94 716 aa24.5■■□□□ 1.51
TPM1-211ENST00000558314 APLP2Q06481 763 aa24.48■■□□□ 1.51
TPM1-211ENST00000558314 NCKAP5LQ9HCH0 1330 aa24.47■■□□□ 1.51
TPM1-211ENST00000558314 CAMSAP1Q5T5Y3 1602 aa24.46■■□□□ 1.51
TPM1-211ENST00000558314 PPP6R1Q9UPN7 881 aa24.46■■□□□ 1.51
TPM1-211ENST00000558314 PTPRKQ15262 1439 aa24.45■■□□□ 1.51
TPM1-211ENST00000558314 NCOA1Q15788 1441 aa24.45■■□□□ 1.51
TPM1-211ENST00000558314 PTPRTO14522 1441 aa24.44■■□□□ 1.5
TPM1-211ENST00000558314 WASHC2CQ9Y4E1 1318 aa24.43■■□□□ 1.5
TPM1-211ENST00000558314 MYO3AQ8NEV4 1616 aa24.42■■□□□ 1.5
TPM1-211ENST00000558314 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
TPM1-211ENST00000558314 ARHGEF5Q12774 1597 aa24.41■■□□□ 1.5
TPM1-211ENST00000558314 CEP170BQ9Y4F5 1589 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms