RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
RTF1-205ENST00000558298 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
RTF1-205ENST00000558298 ARHGEF40Q8TER5 1519 aa12.45□□□□□ -0.42
RTF1-205ENST00000558298 ADGRL1O94910 1474 aa12.45□□□□□ -0.42
RTF1-205ENST00000558298 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
RTF1-205ENST00000558298 CDC42BPAQ5VT25 1732 aa12.44□□□□□ -0.42
RTF1-205ENST00000558298 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
RTF1-205ENST00000558298 POGZQ7Z3K3 1410 aa12.42□□□□□ -0.42
RTF1-205ENST00000558298 KDM5CP41229 1560 aa12.42□□□□□ -0.42
RTF1-205ENST00000558298 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
RTF1-205ENST00000558298 SUPT6HQ7KZ85 1726 aaKnown RBP12.41□□□□□ -0.42
RTF1-205ENST00000558298 SIGLEC1Q9BZZ2 1709 aa12.41□□□□□ -0.42
RTF1-205ENST00000558298 ABCC1P33527 1531 aa12.4□□□□□ -0.42
RTF1-205ENST00000558298 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
RTF1-205ENST00000558298 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
RTF1-205ENST00000558298 MAGI2Q86UL8 1455 aa12.39□□□□□ -0.43
RTF1-205ENST00000558298 ADAMTSL3P82987 1691 aa12.38□□□□□ -0.43
RTF1-205ENST00000558298 ARHGAP5Q13017 1502 aa12.37□□□□□ -0.43
RTF1-205ENST00000558298 MTUS2Q5JR59 1369 aa12.37□□□□□ -0.43
RTF1-205ENST00000558298 BCORL1Q5H9F3 1711 aa12.37□□□□□ -0.43
RTF1-205ENST00000558298 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
RTF1-205ENST00000558298 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
RTF1-205ENST00000558298 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
RTF1-205ENST00000558298 SCAPERQ9BY12 1400 aa12.37□□□□□ -0.43
RTF1-205ENST00000558298 SAMD9LQ8IVG5 1584 aa12.36□□□□□ -0.43
RTF1-205ENST00000558298 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
RTF1-205ENST00000558298 ZNF518AQ6AHZ1 1483 aa12.35□□□□□ -0.43
RTF1-205ENST00000558298 YEATS2Q9ULM3 1422 aa12.35□□□□□ -0.43
RTF1-205ENST00000558298 HECW2Q9P2P5 1572 aa12.34□□□□□ -0.43
RTF1-205ENST00000558298 REREQ9P2R6 1566 aa12.34□□□□□ -0.43
RTF1-205ENST00000558298 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
RTF1-205ENST00000558298 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
RTF1-205ENST00000558298 EFCAB2Q5VUJ9 269 aa12.33□□□□□ -0.44
RTF1-205ENST00000558298 KIAA1107Q9UPP5 1409 aa12.33□□□□□ -0.44
RTF1-205ENST00000558298 DIP2CQ9Y2E4 1556 aa12.32□□□□□ -0.44
RTF1-205ENST00000558298 AEBP2Q6ZN18 517 aaPredicted RBP12.32□□□□□ -0.44
RTF1-205ENST00000558298 ABCA6Q8N139 1617 aa12.32□□□□□ -0.44
RTF1-205ENST00000558298 MLH3Q9UHC1 1453 aa12.32□□□□□ -0.44
RTF1-205ENST00000558298 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
RTF1-205ENST00000558298 MADDQ8WXG6 1647 aa12.3□□□□□ -0.44
RTF1-205ENST00000558298 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
RTF1-205ENST00000558298 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
RTF1-205ENST00000558298 MIA2Q96PC5 1412 aa12.29□□□□□ -0.44
RTF1-205ENST00000558298 INO80Q9ULG1 1556 aaPredicted RBP12.29□□□□□ -0.44
RTF1-205ENST00000558298 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
RTF1-205ENST00000558298 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
RTF1-205ENST00000558298 ATP10AO60312 1499 aa12.27□□□□□ -0.44
RTF1-205ENST00000558298 ARHGEF5Q12774 1597 aa12.27□□□□□ -0.44
RTF1-205ENST00000558298 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.45
RTF1-205ENST00000558298 MYOM3Q5VTT5 1437 aa12.26□□□□□ -0.45
RTF1-205ENST00000558298 PTPRMP28827 1452 aa12.26□□□□□ -0.45
RTF1-205ENST00000558298 MBD5Q9P267 1494 aa12.26□□□□□ -0.45
RTF1-205ENST00000558298 AGLP35573 1532 aa12.26□□□□□ -0.45
RTF1-205ENST00000558298 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
RTF1-205ENST00000558298 FER1L4A9Z1Z3 1794 aa12.24□□□□□ -0.45
RTF1-205ENST00000558298 RIMS1Q86UR5 1692 aaKnown RBP12.24□□□□□ -0.45
RTF1-205ENST00000558298 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
RTF1-205ENST00000558298 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
RTF1-205ENST00000558298 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
RTF1-205ENST00000558298 ATP7AQ04656 1500 aa12.22□□□□□ -0.45
RTF1-205ENST00000558298 TCOF1Q13428 1488 aaKnown RBP12.22□□□□□ -0.45
RTF1-205ENST00000558298 APLP2Q06481 763 aa12.21□□□□□ -0.45
RTF1-205ENST00000558298 TRIM26Q12899 539 aaPredicted RBP12.21□□□□□ -0.45
RTF1-205ENST00000558298 KANK4Q5T7N3 995 aaPredicted RBP12.21□□□□□ -0.45
RTF1-205ENST00000558298 CFDP1Q9UEE9 299 aaPredicted RBP12.21□□□□□ -0.45
RTF1-205ENST00000558298 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
RTF1-205ENST00000558298 RTEL1-TNFRSF6BF6WH68 1400 aa12.2□□□□□ -0.46
RTF1-205ENST00000558298 RSPH4AQ5TD94 716 aa12.2□□□□□ -0.46
RTF1-205ENST00000558298 SHANK2Q9UPX8 1470 aa12.2□□□□□ -0.46
RTF1-205ENST00000558298 CROCC2H7BZ55 1655 aa12.19□□□□□ -0.46
RTF1-205ENST00000558298 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
RTF1-205ENST00000558298 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
RTF1-205ENST00000558298 FGD6Q6ZV73 1430 aa12.19□□□□□ -0.46
RTF1-205ENST00000558298 ZNF644Q9H582 1327 aaPredicted RBP12.17□□□□□ -0.46
RTF1-205ENST00000558298 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
RTF1-205ENST00000558298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.16□□□□□ -0.46
RTF1-205ENST00000558298 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
RTF1-205ENST00000558298 LMTK3Q96Q04 1460 aa12.15□□□□□ -0.46
RTF1-205ENST00000558298 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
RTF1-205ENST00000558298 ARID4BQ4LE39 1312 aaPredicted RBP12.14□□□□□ -0.47
RTF1-205ENST00000558298 MROH2AA6NES4 1674 aa12.14□□□□□ -0.47
RTF1-205ENST00000558298 ZNF777Q9ULD5 760 aaPredicted RBP12.14□□□□□ -0.47
RTF1-205ENST00000558298 A2MP01023 1474 aa12.14□□□□□ -0.47
RTF1-205ENST00000558298 C3P01024 1663 aa12.13□□□□□ -0.47
RTF1-205ENST00000558298 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
RTF1-205ENST00000558298 EIF2AK4Q9P2K8 1649 aaKnown RBP12.12□□□□□ -0.47
RTF1-205ENST00000558298 PREX1Q8TCU6 1659 aa12.11□□□□□ -0.47
RTF1-205ENST00000558298 ADGRL2O95490 1459 aa12.1□□□□□ -0.47
RTF1-205ENST00000558298 RRBP1Q9P2E9 1410 aaKnown RBP12.1□□□□□ -0.47
RTF1-205ENST00000558298 ABCC5O15440 1437 aa12.09□□□□□ -0.47
RTF1-205ENST00000558298 DAPK1P53355 1430 aa12.09□□□□□ -0.47
RTF1-205ENST00000558298 RNF17Q9BXT8 1623 aaKnown RBP12.08□□□□□ -0.48
RTF1-205ENST00000558298 CNTLNQ9NXG0 1405 aa12.08□□□□□ -0.48
RTF1-205ENST00000558298 CLTCQ00610 1675 aaKnown RBP12.06□□□□□ -0.48
RTF1-205ENST00000558298 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
RTF1-205ENST00000558298 MLECQ14165 292 aa12.06□□□□□ -0.48
RTF1-205ENST00000558298 MROH1Q8NDA8 1641 aa12.06□□□□□ -0.48
RTF1-205ENST00000558298 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
RTF1-205ENST00000558298 DEPDC5O75140 1603 aa12.05□□□□□ -0.48
RTF1-205ENST00000558298 ERBINQ96RT1 1412 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms