RNA–Protein interactions for RNA: ENST00000558271.5

LRRC49-209, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-209ENST00000558271 TAOK2Q9UL54 1235 aa10.59□□□□□ -0.71
LRRC49-209ENST00000558271 NLRP6P59044 892 aa10.58□□□□□ -0.72
LRRC49-209ENST00000558271 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
LRRC49-209ENST00000558271 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
LRRC49-209ENST00000558271 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
LRRC49-209ENST00000558271 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
LRRC49-209ENST00000558271 STK24Q9Y6E0 443 aa10.53□□□□□ -0.72
LRRC49-209ENST00000558271 MFRPQ9BY79 579 aa10.52□□□□□ -0.73
LRRC49-209ENST00000558271 ZNF687Q8N1G0 1237 aa10.5□□□□□ -0.73
LRRC49-209ENST00000558271 STK25O00506 426 aa10.48□□□□□ -0.73
LRRC49-209ENST00000558271 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
LRRC49-209ENST00000558271 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
LRRC49-209ENST00000558271 KIF3CO14782 793 aa10.46□□□□□ -0.73
LRRC49-209ENST00000558271 PKD2Q13563 968 aa10.46□□□□□ -0.73
LRRC49-209ENST00000558271 RGL2O15211 777 aa10.43□□□□□ -0.74
LRRC49-209ENST00000558271 C2orf72A6NCS6 295 aa10.41□□□□□ -0.74
LRRC49-209ENST00000558271 ZNF316A6NFI3 1004 aaPredicted RBP10.41□□□□□ -0.74
LRRC49-209ENST00000558271 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.74
LRRC49-209ENST00000558271 RNF166Q96A37 237 aaPredicted RBP10.39□□□□□ -0.75
LRRC49-209ENST00000558271 MYT1LQ9UL68 1186 aa10.38□□□□□ -0.75
LRRC49-209ENST00000558271 SLC34A2O95436 690 aa10.37□□□□□ -0.75
LRRC49-209ENST00000558271 PTGER2P43116 358 aa10.34□□□□□ -0.75
LRRC49-209ENST00000558271 PPP1R37O75864 691 aa10.33□□□□□ -0.76
LRRC49-209ENST00000558271 NUDT7P0C024 238 aa10.32□□□□□ -0.76
LRRC49-209ENST00000558271 TMC2Q8TDI7 906 aa10.32□□□□□ -0.76
LRRC49-209ENST00000558271 PCDHGA4Q9Y5G9 962 aa10.32□□□□□ -0.76
LRRC49-209ENST00000558271 ANKRD13DQ6ZTN6 518 aa10.31□□□□□ -0.76
LRRC49-209ENST00000558271 LSM11P83369 360 aaKnown RBP eCLIP10.3□□□□□ -0.76
LRRC49-209ENST00000558271 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
LRRC49-209ENST00000558271 PBX2P40425 430 aa10.28□□□□□ -0.76
LRRC49-209ENST00000558271 POTEEQ6S8J3 1075 aa10.27□□□□□ -0.77
LRRC49-209ENST00000558271 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
LRRC49-209ENST00000558271 HS6ST3Q8IZP7 471 aa10.23□□□□□ -0.77
LRRC49-209ENST00000558271 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
LRRC49-209ENST00000558271 AXIN2Q9Y2T1 843 aa10.22□□□□□ -0.77
LRRC49-209ENST00000558271 FOXK1P85037 733 aa10.21□□□□□ -0.77
LRRC49-209ENST00000558271 GPHNQ9NQX3 736 aaPredicted RBP10.2□□□□□ -0.78
LRRC49-209ENST00000558271 PSDA5PKW4 1024 aaPredicted RBP10.19□□□□□ -0.78
LRRC49-209ENST00000558271 PLPP6Q8IY26 295 aa10.18□□□□□ -0.78
LRRC49-209ENST00000558271 ARHGAP33O14559 1287 aa10.17□□□□□ -0.78
LRRC49-209ENST00000558271 DSG2Q14126 1118 aa10.14□□□□□ -0.79
LRRC49-209ENST00000558271 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
LRRC49-209ENST00000558271 ADGRD1Q6QNK2 874 aa10.13□□□□□ -0.79
LRRC49-209ENST00000558271 CHGAP10645 457 aaKnown RBP10.12□□□□□ -0.79
LRRC49-209ENST00000558271 TBC1D12O60347 775 aa10.11□□□□□ -0.79
LRRC49-209ENST00000558271 TK2O00142 265 aa10.1□□□□□ -0.79
LRRC49-209ENST00000558271 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
LRRC49-209ENST00000558271 HRO43593 1189 aa10.08□□□□□ -0.8
LRRC49-209ENST00000558271 PSEN2P49810 448 aa10.08□□□□□ -0.8
LRRC49-209ENST00000558271 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
LRRC49-209ENST00000558271 HCSTQ9UBK5 93 aa10.08□□□□□ -0.8
LRRC49-209ENST00000558271 PPP4R3BQ5MIZ7 849 aa10.07□□□□□ -0.8
LRRC49-209ENST00000558271 OXER1Q8TDS5 423 aa10.06□□□□□ -0.8
LRRC49-209ENST00000558271 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
LRRC49-209ENST00000558271 CRISPLD2Q9H0B8 497 aa10.04□□□□□ -0.8
LRRC49-209ENST00000558271 PLA2G2EQ9NZK7 142 aa10.01□□□□□ -0.81
LRRC49-209ENST00000558271 PPP1R15BQ5SWA1 713 aa9.98□□□□□ -0.81
LRRC49-209ENST00000558271 KCNK17Q96T54 332 aa9.98□□□□□ -0.81
LRRC49-209ENST00000558271 PDE4AP27815 886 aa9.97□□□□□ -0.81
LRRC49-209ENST00000558271 UPF1Q92900 1129 aaKnown RBP eCLIP9.97□□□□□ -0.81
LRRC49-209ENST00000558271 NCKAP5LQ9HCH0 1330 aa9.97□□□□□ -0.81
LRRC49-209ENST00000558271 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
LRRC49-209ENST00000558271 ANO8Q9HCE9 1232 aaPredicted RBP9.96□□□□□ -0.82
LRRC49-209ENST00000558271 VPS9D1Q9Y2B5 631 aa9.96□□□□□ -0.82
LRRC49-209ENST00000558271 ZNF454Q8N9F8 522 aa9.95□□□□□ -0.82
LRRC49-209ENST00000558271 STAC3Q96MF2 364 aa9.95□□□□□ -0.82
LRRC49-209ENST00000558271 SLC4A5Q9BY07 1137 aa9.95□□□□□ -0.82
LRRC49-209ENST00000558271 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
LRRC49-209ENST00000558271 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
LRRC49-209ENST00000558271 FOSBP53539 338 aa9.94□□□□□ -0.82
LRRC49-209ENST00000558271 KCTD12Q96CX2 325 aaKnown RBP9.94□□□□□ -0.82
LRRC49-209ENST00000558271 BHMG1C9JSJ3 638 aaPredicted RBP9.9□□□□□ -0.82
LRRC49-209ENST00000558271 EVI5O60447 810 aa9.89□□□□□ -0.83
LRRC49-209ENST00000558271 PTPREP23469 700 aa9.88□□□□□ -0.83
LRRC49-209ENST00000558271 JPH4Q96JJ6 628 aa9.88□□□□□ -0.83
LRRC49-209ENST00000558271 LARP6Q9BRS8 491 aaKnown RBP9.88□□□□□ -0.83
LRRC49-209ENST00000558271 MFSD10Q14728 455 aa9.87□□□□□ -0.83
LRRC49-209ENST00000558271 DDX27Q96GQ7 796 aaKnown RBP9.87□□□□□ -0.83
LRRC49-209ENST00000558271 ZBED2Q9BTP6 218 aa9.87□□□□□ -0.83
LRRC49-209ENST00000558271 ZDHHC16Q969W1 377 aa9.85□□□□□ -0.83
LRRC49-209ENST00000558271 ADAM33Q9BZ11 813 aa9.85□□□□□ -0.83
LRRC49-209ENST00000558271 PTPN5P54829 565 aa9.83□□□□□ -0.84
LRRC49-209ENST00000558271 MAP3K9P80192 1104 aa9.83□□□□□ -0.84
LRRC49-209ENST00000558271 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
LRRC49-209ENST00000558271 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
LRRC49-209ENST00000558271 THSD4Q6ZMP0 1018 aa9.81□□□□□ -0.84
LRRC49-209ENST00000558271 MRPL50Q8N5N7 158 aaKnown RBP9.8□□□□□ -0.84
LRRC49-209ENST00000558271 PCDHGA10Q9Y5H3 936 aa9.79□□□□□ -0.84
LRRC49-209ENST00000558271 GOLGA8CPA6NN73 597 aa9.78□□□□□ -0.84
LRRC49-209ENST00000558271 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
LRRC49-209ENST00000558271 WNT2BQ93097 391 aa9.77□□□□□ -0.85
LRRC49-209ENST00000558271 NBPF3Q9H094 633 aa9.76□□□□□ -0.85
LRRC49-209ENST00000558271 PPP1R3GB7ZBB8 358 aa9.74□□□□□ -0.85
LRRC49-209ENST00000558271 RABGEF1Q9UJ41 708 aa9.74□□□□□ -0.85
LRRC49-209ENST00000558271 RGS20O76081 388 aa9.73□□□□□ -0.85
LRRC49-209ENST00000558271 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
LRRC49-209ENST00000558271 PHF14O94880 888 aa9.72□□□□□ -0.85
LRRC49-209ENST00000558271 COL9A1P20849 921 aa9.72□□□□□ -0.85
LRRC49-209ENST00000558271 TYW1BQ6NUM6 668 aa9.72□□□□□ -0.85
LRRC49-209ENST00000558271 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms