RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 KNSTRNQ9Y448 316 aa4.67□□□□□ -1.66
ATXN3-248ENST00000558190 MRE11P49959 708 aa4.67□□□□□ -1.66
ATXN3-248ENST00000558190 GOLGA6L6A8MZA4 724 aa4.66□□□□□ -1.66
ATXN3-248ENST00000558190 TEX35Q5T0J7 233 aa4.66□□□□□ -1.66
ATXN3-248ENST00000558190 PLCD3Q8N3E9 789 aa4.66□□□□□ -1.66
ATXN3-248ENST00000558190 CREBRFQ8IUR6 639 aa4.66□□□□□ -1.66
ATXN3-248ENST00000558190 IPO4Q8TEX9 1081 aaKnown RBP4.65□□□□□ -1.66
ATXN3-248ENST00000558190 PDCL3Q9H2J4 239 aa4.65□□□□□ -1.66
ATXN3-248ENST00000558190 CHGAP10645 457 aaKnown RBP4.65□□□□□ -1.66
ATXN3-248ENST00000558190 CBX1P83916 185 aa4.65□□□□□ -1.67
ATXN3-248ENST00000558190 KIAA1211Q6ZU35 1233 aa4.65□□□□□ -1.67
ATXN3-248ENST00000558190 DDX49Q9Y6V7 483 aaKnown RBP4.65□□□□□ -1.67
ATXN3-248ENST00000558190 SENP3Q9H4L4 574 aaPredicted RBP4.64□□□□□ -1.67
ATXN3-248ENST00000558190 TAOK2Q9UL54 1235 aa4.64□□□□□ -1.67
ATXN3-248ENST00000558190 NRDCO43847 1150 aa4.64□□□□□ -1.67
ATXN3-248ENST00000558190 MFAP1P55081 439 aaKnown RBP4.64□□□□□ -1.67
ATXN3-248ENST00000558190 FAM161AQ3B820 660 aa4.64□□□□□ -1.67
ATXN3-248ENST00000558190 HSPA5P11021 654 aaKnown RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 SETQ01105 290 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 TRERF1Q96PN7 1200 aa4.63□□□□□ -1.67
ATXN3-248ENST00000558190 PRPF40AO75400 957 aaKnown RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 FGD1P98174 961 aa4.63□□□□□ -1.67
ATXN3-248ENST00000558190 NAP1L2Q9ULW6 460 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 APBB1O00213 710 aa4.63□□□□□ -1.67
ATXN3-248ENST00000558190 PATL2C9JE40 543 aaKnown RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 CHMP4BQ9H444 224 aaKnown RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 GPS2Q13227 327 aa4.63□□□□□ -1.67
ATXN3-248ENST00000558190 MTERF4Q7Z6M4 381 aaKnown RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 FOXD4L6Q3SYB3 417 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 FOXD4L3Q6VB84 417 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 FTSJ3Q8IY81 847 aaKnown RBP4.63□□□□□ -1.67
ATXN3-248ENST00000558190 CHMP5Q9NZZ3 219 aa4.62□□□□□ -1.67
ATXN3-248ENST00000558190 ANKRD45Q5TZF3 282 aa4.62□□□□□ -1.67
ATXN3-248ENST00000558190 NISCHQ9Y2I1 1504 aa4.62□□□□□ -1.67
ATXN3-248ENST00000558190 SYAP1Q96A49 352 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-248ENST00000558190 CHMP3Q9Y3E7 222 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 TAF7LQ5H9L4 462 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 NOM1Q5C9Z4 860 aaKnown RBP4.61□□□□□ -1.67
ATXN3-248ENST00000558190 NOC3LQ8WTT2 800 aaKnown RBP4.61□□□□□ -1.67
ATXN3-248ENST00000558190 PRDM10Q9NQV6 1147 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 ESPNB1AK53 854 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 E9PSI1 815 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 CHMP4AQ9BY43 222 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 PDE3BQ13370 1112 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 CCDC39Q9UFE4 941 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 NUDCQ9Y266 331 aa4.61□□□□□ -1.67
ATXN3-248ENST00000558190 CALRP27797 417 aaKnown RBP4.61□□□□□ -1.67
ATXN3-248ENST00000558190 CRBNQ96SW2 442 aa4.6□□□□□ -1.67
ATXN3-248ENST00000558190 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-248ENST00000558190 C11orf95C9JLR9 678 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-248ENST00000558190 DIAPH3Q9NSV4 1193 aa4.6□□□□□ -1.67
ATXN3-248ENST00000558190 TAF3Q5VWG9 929 aa4.6□□□□□ -1.67
ATXN3-248ENST00000558190 ZHX1Q9UKY1 873 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-248ENST00000558190 GPATCH11Q8N954 259 aa4.59□□□□□ -1.67
ATXN3-248ENST00000558190 SPDYE4A6NLX3 237 aa4.59□□□□□ -1.67
ATXN3-248ENST00000558190 BACH2Q9BYV9 841 aa4.59□□□□□ -1.67
ATXN3-248ENST00000558190 RRP12Q5JTH9 1297 aaKnown RBP4.59□□□□□ -1.67
ATXN3-248ENST00000558190 CLUAP1Q96AJ1 413 aa4.59□□□□□ -1.67
ATXN3-248ENST00000558190 CARD11Q9BXL7 1154 aa4.59□□□□□ -1.67
ATXN3-248ENST00000558190 RNF214Q8ND24 703 aa4.59□□□□□ -1.67
ATXN3-248ENST00000558190 XRCC6P12956 609 aaKnown RBP eCLIP4.59□□□□□ -1.68
ATXN3-248ENST00000558190 HOMER1Q86YM7 354 aa4.59□□□□□ -1.68
ATXN3-248ENST00000558190 RALBP1Q15311 655 aa4.58□□□□□ -1.68
ATXN3-248ENST00000558190 U2SURPO15042 1029 aaKnown RBP4.58□□□□□ -1.68
ATXN3-248ENST00000558190 MCTP1Q6DN14 999 aa4.58□□□□□ -1.68
ATXN3-248ENST00000558190 PMFBP1Q8TBY8 1022 aa4.58□□□□□ -1.68
ATXN3-248ENST00000558190 MCM4P33991 863 aa4.58□□□□□ -1.68
ATXN3-248ENST00000558190 TPD52L1Q16890 204 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-248ENST00000558190 IGSF3O75054 1194 aa4.58□□□□□ -1.68
ATXN3-248ENST00000558190 GNL2Q13823 731 aaKnown RBP4.58□□□□□ -1.68
ATXN3-248ENST00000558190 DEF6Q9H4E7 631 aa4.58□□□□□ -1.68
ATXN3-248ENST00000558190 OS9Q13438 667 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-248ENST00000558190 CFAP53Q96M91 514 aa4.58□□□□□ -1.68
ATXN3-248ENST00000558190 HTATSF1O43719 755 aaKnown RBP4.58□□□□□ -1.68
ATXN3-248ENST00000558190 PLCD4Q9BRC7 762 aa4.58□□□□□ -1.68
ATXN3-248ENST00000558190 NASPP49321 788 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-248ENST00000558190 PAXIP1Q6ZW49 1069 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-248ENST00000558190 GOLGA2Q08379 1002 aa4.57□□□□□ -1.68
ATXN3-248ENST00000558190 MORC1Q86VD1 984 aa4.57□□□□□ -1.68
ATXN3-248ENST00000558190 TPM3P06753 285 aa4.57□□□□□ -1.68
ATXN3-248ENST00000558190 GTF2A1P52655 376 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-248ENST00000558190 TSR1Q2NL82 804 aaKnown RBP4.57□□□□□ -1.68
ATXN3-248ENST00000558190 C22orf23Q9BZE7 217 aa4.57□□□□□ -1.68
ATXN3-248ENST00000558190 POLR3GO15318 223 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-248ENST00000558190 DDX11L8A8MPP1 907 aa4.57□□□□□ -1.68
ATXN3-248ENST00000558190 TONSLQ96HA7 1378 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 NUCB2P80303 420 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 FBXW7Q969H0 707 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 PPP4R3BQ5MIZ7 849 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 IBSPP21815 317 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-248ENST00000558190 PDIA4P13667 645 aaKnown RBP4.56□□□□□ -1.68
ATXN3-248ENST00000558190 CENPQQ7L2Z9 268 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-248ENST00000558190 MCCP23508 829 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 TSPY4P0CV99 314 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 TSPY10P0CW01 314 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 NOL8Q76FK4 1167 aaKnown RBP4.56□□□□□ -1.68
ATXN3-248ENST00000558190 PANK3Q9H999 370 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 HSP90AB3PQ58FF7 597 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 HMGN5P82970 282 aaKnown RBP4.56□□□□□ -1.68
ATXN3-248ENST00000558190 FBLN2P98095 1184 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms