RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 NLRP6P59044 892 aa13.19□□□□□ -0.3
CLPX-202ENST00000558103 NKX1-1Q15270 411 aaPredicted RBP13.19□□□□□ -0.3
CLPX-202ENST00000558103 MFRPQ9BY79 579 aa13.19□□□□□ -0.3
CLPX-202ENST00000558103 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
CLPX-202ENST00000558103 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
CLPX-202ENST00000558103 FBXO22Q8NEZ5 403 aa13.16□□□□□ -0.3
CLPX-202ENST00000558103 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
CLPX-202ENST00000558103 MS4A4AQ96JQ5 239 aa13.14□□□□□ -0.31
CLPX-202ENST00000558103 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
CLPX-202ENST00000558103 C3orf67Q6ZVT6 689 aa13.1□□□□□ -0.31
CLPX-202ENST00000558103 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
CLPX-202ENST00000558103 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
CLPX-202ENST00000558103 GTPBP6O43824 516 aaPredicted RBP13.07□□□□□ -0.32
CLPX-202ENST00000558103 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
CLPX-202ENST00000558103 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
CLPX-202ENST00000558103 PPP1R37O75864 691 aa13.02□□□□□ -0.33
CLPX-202ENST00000558103 NACADO15069 1562 aa13.02□□□□□ -0.33
CLPX-202ENST00000558103 G3V3G9 751 aa13.01□□□□□ -0.33
CLPX-202ENST00000558103 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
CLPX-202ENST00000558103 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
CLPX-202ENST00000558103 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
CLPX-202ENST00000558103 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
CLPX-202ENST00000558103 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.34
CLPX-202ENST00000558103 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
CLPX-202ENST00000558103 HOXB3P14651 431 aaPredicted RBP12.89□□□□□ -0.35
CLPX-202ENST00000558103 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
CLPX-202ENST00000558103 ERBB3P21860 1342 aa12.88□□□□□ -0.35
CLPX-202ENST00000558103 MYO15BQ96JP2 1530 aa12.84□□□□□ -0.35
CLPX-202ENST00000558103 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
CLPX-202ENST00000558103 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
CLPX-202ENST00000558103 PLCB2Q00722 1185 aa12.81□□□□□ -0.36
CLPX-202ENST00000558103 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
CLPX-202ENST00000558103 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
CLPX-202ENST00000558103 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
CLPX-202ENST00000558103 KIF3CO14782 793 aa12.75□□□□□ -0.37
CLPX-202ENST00000558103 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
CLPX-202ENST00000558103 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
CLPX-202ENST00000558103 TMC2Q8TDI7 906 aa12.74□□□□□ -0.37
CLPX-202ENST00000558103 PDE4AP27815 886 aa12.72□□□□□ -0.37
CLPX-202ENST00000558103 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
CLPX-202ENST00000558103 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
CLPX-202ENST00000558103 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
CLPX-202ENST00000558103 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
CLPX-202ENST00000558103 NCKAP5LQ9HCH0 1330 aa12.69□□□□□ -0.38
CLPX-202ENST00000558103 ZCCHC6Q5VYS8 1495 aaKnown RBP12.66□□□□□ -0.38
CLPX-202ENST00000558103 FOXK1P85037 733 aa12.65□□□□□ -0.38
CLPX-202ENST00000558103 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.38
CLPX-202ENST00000558103 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
CLPX-202ENST00000558103 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
CLPX-202ENST00000558103 DSG2Q14126 1118 aa12.63□□□□□ -0.39
CLPX-202ENST00000558103 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
CLPX-202ENST00000558103 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
CLPX-202ENST00000558103 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
CLPX-202ENST00000558103 HAP1P54257 671 aaPredicted RBP12.6□□□□□ -0.39
CLPX-202ENST00000558103 MFSD10Q14728 455 aa12.6□□□□□ -0.39
CLPX-202ENST00000558103 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
CLPX-202ENST00000558103 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
CLPX-202ENST00000558103 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
CLPX-202ENST00000558103 PTGER2P43116 358 aa12.57□□□□□ -0.4
CLPX-202ENST00000558103 SLC34A2O95436 690 aa12.54□□□□□ -0.4
CLPX-202ENST00000558103 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
CLPX-202ENST00000558103 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
CLPX-202ENST00000558103 PLA2G2EQ9NZK7 142 aa12.52□□□□□ -0.41
CLPX-202ENST00000558103 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
CLPX-202ENST00000558103 ZSWIM6Q9HCJ5 1215 aa12.5□□□□□ -0.41
CLPX-202ENST00000558103 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
CLPX-202ENST00000558103 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
CLPX-202ENST00000558103 EIF4G1Q04637 1599 aaKnown RBP12.45□□□□□ -0.42
CLPX-202ENST00000558103 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
CLPX-202ENST00000558103 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
CLPX-202ENST00000558103 ARSIQ5FYB1 569 aa12.44□□□□□ -0.42
CLPX-202ENST00000558103 OXER1Q8TDS5 423 aa12.44□□□□□ -0.42
CLPX-202ENST00000558103 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
CLPX-202ENST00000558103 PCDHGA4Q9Y5G9 962 aa12.44□□□□□ -0.42
CLPX-202ENST00000558103 TBC1D12O60347 775 aa12.43□□□□□ -0.42
CLPX-202ENST00000558103 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
CLPX-202ENST00000558103 E2F4Q16254 413 aa12.43□□□□□ -0.42
CLPX-202ENST00000558103 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
CLPX-202ENST00000558103 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLPX-202ENST00000558103 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.43
CLPX-202ENST00000558103 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.433e-7■■□□□ 14
CLPX-202ENST00000558103 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
CLPX-202ENST00000558103 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
CLPX-202ENST00000558103 ZNF316A6NFI3 1004 aaPredicted RBP12.35□□□□□ -0.43
CLPX-202ENST00000558103 NUDT7P0C024 238 aa12.35□□□□□ -0.43
CLPX-202ENST00000558103 ARIH1Q9Y4X5 557 aaPredicted RBP12.34□□□□□ -0.43
CLPX-202ENST00000558103 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
CLPX-202ENST00000558103 DPYSL4O14531 572 aa12.31□□□□□ -0.44
CLPX-202ENST00000558103 ANO8Q9HCE9 1232 aaPredicted RBP12.31□□□□□ -0.44
CLPX-202ENST00000558103 EVI5O60447 810 aa12.3□□□□□ -0.44
CLPX-202ENST00000558103 KCNV2Q8TDN2 545 aa12.28□□□□□ -0.44
CLPX-202ENST00000558103 LHX6Q9UPM6 363 aa12.28□□□□□ -0.44
CLPX-202ENST00000558103 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
CLPX-202ENST00000558103 P3H3Q8IVL6 736 aa12.27□□□□□ -0.45
CLPX-202ENST00000558103 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CLPX-202ENST00000558103 POTEEQ6S8J3 1075 aa12.26□□□□□ -0.45
CLPX-202ENST00000558103 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
CLPX-202ENST00000558103 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
CLPX-202ENST00000558103 PDIA6Q15084 440 aa12.21□□□□□ -0.45
CLPX-202ENST00000558103 PSDA5PKW4 1024 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms