RNA–Protein interactions for RNA: ENST00000558099.1

CSHL1-207, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2

Gene CSHL1, Length 1,590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-207ENST00000558099 POGZQ7Z3K3 1410 aa21.16■□□□□ 0.98
CSHL1-207ENST00000558099 SCAPERQ9BY12 1400 aa21.16■□□□□ 0.98
CSHL1-207ENST00000558099 ADAMTSL3P82987 1691 aa21.15■□□□□ 0.98
CSHL1-207ENST00000558099 MAGI2Q86UL8 1455 aa21.15■□□□□ 0.98
CSHL1-207ENST00000558099 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.98
CSHL1-207ENST00000558099 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.97
CSHL1-207ENST00000558099 YEATS2Q9ULM3 1422 aa21.13■□□□□ 0.97
CSHL1-207ENST00000558099 CDC42BPBQ9Y5S2 1711 aa21.09■□□□□ 0.97
CSHL1-207ENST00000558099 BCORL1Q5H9F3 1711 aa21.09■□□□□ 0.97
CSHL1-207ENST00000558099 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
CSHL1-207ENST00000558099 CEP162Q5TB80 1403 aa21.08■□□□□ 0.96
CSHL1-207ENST00000558099 ZFYVE16Q7Z3T8 1539 aa21.07■□□□□ 0.96
CSHL1-207ENST00000558099 KDM5CP41229 1560 aa21.07■□□□□ 0.96
CSHL1-207ENST00000558099 ARHGEF12Q9NZN5 1544 aa21.06■□□□□ 0.96
CSHL1-207ENST00000558099 ARHGAP5Q13017 1502 aa21.06■□□□□ 0.96
CSHL1-207ENST00000558099 PREX2Q70Z35 1606 aa21.06■□□□□ 0.96
CSHL1-207ENST00000558099 PTPRMP28827 1452 aa21.05■□□□□ 0.96
CSHL1-207ENST00000558099 ZNF518AQ6AHZ1 1483 aa21.03■□□□□ 0.96
CSHL1-207ENST00000558099 GPATCH8Q9UKJ3 1502 aaKnown RBP21.03■□□□□ 0.96
CSHL1-207ENST00000558099 AFAP1Q8N556 730 aa21.02■□□□□ 0.96
CSHL1-207ENST00000558099 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.95
CSHL1-207ENST00000558099 ABCC1P33527 1531 aa21.01■□□□□ 0.95
CSHL1-207ENST00000558099 CDC42BPAQ5VT25 1732 aa21.01■□□□□ 0.95
CSHL1-207ENST00000558099 ATP10AO60312 1499 aa21.01■□□□□ 0.95
CSHL1-207ENST00000558099 MLH3Q9UHC1 1453 aa21■□□□□ 0.95
CSHL1-207ENST00000558099 TRAPPC8Q9Y2L5 1435 aa21■□□□□ 0.95
CSHL1-207ENST00000558099 MADDQ8WXG6 1647 aa20.99■□□□□ 0.95
CSHL1-207ENST00000558099 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
CSHL1-207ENST00000558099 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
CSHL1-207ENST00000558099 C9orf84Q5VXU9 1444 aa20.96■□□□□ 0.95
CSHL1-207ENST00000558099 ARID4BQ4LE39 1312 aaPredicted RBP20.95■□□□□ 0.95
CSHL1-207ENST00000558099 SAMD9LQ8IVG5 1584 aa20.94■□□□□ 0.94
CSHL1-207ENST00000558099 REREQ9P2R6 1566 aa20.94■□□□□ 0.94
CSHL1-207ENST00000558099 ITSN2Q9NZM3 1697 aa20.94■□□□□ 0.94
CSHL1-207ENST00000558099 PPARGC1BQ86YN6 1023 aaKnown RBP20.93■□□□□ 0.94
CSHL1-207ENST00000558099 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
CSHL1-207ENST00000558099 KIAA1107Q9UPP5 1409 aa20.92■□□□□ 0.94
CSHL1-207ENST00000558099 MTUS2Q5JR59 1369 aa20.91■□□□□ 0.94
CSHL1-207ENST00000558099 EHBP1L1Q8N3D4 1523 aa20.89■□□□□ 0.94
CSHL1-207ENST00000558099 ABCA6Q8N139 1617 aa20.89■□□□□ 0.93
CSHL1-207ENST00000558099 KIDINS220Q9ULH0 1771 aa20.88■□□□□ 0.93
CSHL1-207ENST00000558099 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
CSHL1-207ENST00000558099 AGLP35573 1532 aa20.87■□□□□ 0.93
CSHL1-207ENST00000558099 TIAM1Q13009 1591 aa20.87■□□□□ 0.93
CSHL1-207ENST00000558099 RIMS1Q86UR5 1692 aaKnown RBP20.87■□□□□ 0.93
CSHL1-207ENST00000558099 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
CSHL1-207ENST00000558099 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
CSHL1-207ENST00000558099 SYCP2Q9BX26 1530 aa20.85■□□□□ 0.93
CSHL1-207ENST00000558099 LMTK3Q96Q04 1460 aa20.85■□□□□ 0.93
CSHL1-207ENST00000558099 MBD5Q9P267 1494 aa20.85■□□□□ 0.93
CSHL1-207ENST00000558099 PLEKHH2Q8IVE3 1493 aa20.84■□□□□ 0.93
CSHL1-207ENST00000558099 HNRNPMP52272 730 aaKnown RBP eCLIP20.84■□□□□ 0.93
CSHL1-207ENST00000558099 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
CSHL1-207ENST00000558099 ZNF777Q9ULD5 760 aaPredicted RBP20.81■□□□□ 0.92
CSHL1-207ENST00000558099 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
CSHL1-207ENST00000558099 MLECQ14165 292 aa20.8■□□□□ 0.92
CSHL1-207ENST00000558099 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
CSHL1-207ENST00000558099 FER1L4A9Z1Z3 1794 aa20.79■□□□□ 0.92
CSHL1-207ENST00000558099 INO80Q9ULG1 1556 aaPredicted RBP20.79■□□□□ 0.92
CSHL1-207ENST00000558099 LRRC9Q6ZRR7 1453 aa20.78■□□□□ 0.92
CSHL1-207ENST00000558099 SPAG9O60271 1321 aaKnown RBP20.77■□□□□ 0.92
CSHL1-207ENST00000558099 PLXNC1O60486 1568 aa20.75■□□□□ 0.91
CSHL1-207ENST00000558099 ATP7AQ04656 1500 aa20.75■□□□□ 0.91
CSHL1-207ENST00000558099 SUPT6HQ7KZ85 1726 aaKnown RBP20.73■□□□□ 0.91
CSHL1-207ENST00000558099 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
CSHL1-207ENST00000558099 RTEL1-TNFRSF6BF6WH68 1400 aa20.72■□□□□ 0.91
CSHL1-207ENST00000558099 CEBPAP49715 358 aaPredicted RBP20.71■□□□□ 0.91
CSHL1-207ENST00000558099 MYT1LQ9UL68 1186 aa20.7■□□□□ 0.9
CSHL1-207ENST00000558099 A2MP01023 1474 aa20.69■□□□□ 0.9
CSHL1-207ENST00000558099 CAMSAP2Q08AD1 1489 aa20.68■□□□□ 0.9
CSHL1-207ENST00000558099 RSPH4AQ5TD94 716 aa20.66■□□□□ 0.9
CSHL1-207ENST00000558099 CNTLNQ9NXG0 1405 aa20.65■□□□□ 0.9
CSHL1-207ENST00000558099 HSPA2P54652 639 aa20.64■□□□□ 0.9
CSHL1-207ENST00000558099 ARHGEF5Q12774 1597 aa20.64■□□□□ 0.9
CSHL1-207ENST00000558099 CCDC141Q6ZP82 1450 aa20.64■□□□□ 0.9
CSHL1-207ENST00000558099 C3P01024 1663 aa20.64■□□□□ 0.89
CSHL1-207ENST00000558099 DHX29Q7Z478 1369 aaKnown RBP20.63■□□□□ 0.89
CSHL1-207ENST00000558099 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
CSHL1-207ENST00000558099 ADGBQ8N7X0 1667 aa20.61■□□□□ 0.89
CSHL1-207ENST00000558099 PREX1Q8TCU6 1659 aa20.61■□□□□ 0.89
CSHL1-207ENST00000558099 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
CSHL1-207ENST00000558099 SETD1BQ9UPS6 1966 aaKnown RBP20.6■□□□□ 0.89
CSHL1-207ENST00000558099 MROH2AA6NES4 1674 aa20.59■□□□□ 0.89
CSHL1-207ENST00000558099 MYOM3Q5VTT5 1437 aa20.59■□□□□ 0.89
CSHL1-207ENST00000558099 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
CSHL1-207ENST00000558099 ZMYM3Q14202 1370 aa20.58■□□□□ 0.89
CSHL1-207ENST00000558099 ILDR1Q86SU0 546 aaPredicted RBP20.57■□□□□ 0.88
CSHL1-207ENST00000558099 NPATQ14207 1427 aa20.56■□□□□ 0.88
CSHL1-207ENST00000558099 MAST1Q9Y2H9 1570 aa20.55■□□□□ 0.88
CSHL1-207ENST00000558099 UHRF1BP1Q6BDS2 1440 aa20.54■□□□□ 0.88
CSHL1-207ENST00000558099 PTPRKQ15262 1439 aa20.53■□□□□ 0.88
CSHL1-207ENST00000558099 MYT1Q01538 1121 aa20.51■□□□□ 0.87
CSHL1-207ENST00000558099 STRCQ7RTU9 1775 aa20.51■□□□□ 0.87
CSHL1-207ENST00000558099 GGT6Q6P531 493 aa20.51■□□□□ 0.87
CSHL1-207ENST00000558099 ESF1Q9H501 851 aaKnown RBP20.51■□□□□ 0.87
CSHL1-207ENST00000558099 CLTCQ00610 1675 aaKnown RBP20.5■□□□□ 0.87
CSHL1-207ENST00000558099 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
CSHL1-207ENST00000558099 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
CSHL1-207ENST00000558099 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
CSHL1-207ENST00000558099 TCOF1Q13428 1488 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms