RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
ALPK3-202ENST00000558077 ADGRL1O94910 1474 aa21.71■■□□□ 1.07
ALPK3-202ENST00000558077 PREX2Q70Z35 1606 aa21.71■■□□□ 1.07
ALPK3-202ENST00000558077 VPS8Q8N3P4 1428 aa21.71■■□□□ 1.07
ALPK3-202ENST00000558077 ARHGAP5Q13017 1502 aa21.7■■□□□ 1.06
ALPK3-202ENST00000558077 ZMYM4Q5VZL5 1548 aa21.68■■□□□ 1.06
ALPK3-202ENST00000558077 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
ALPK3-202ENST00000558077 POGZQ7Z3K3 1410 aa21.67■■□□□ 1.06
ALPK3-202ENST00000558077 MTUS2Q5JR59 1369 aa21.65■■□□□ 1.06
ALPK3-202ENST00000558077 ARHGEF12Q9NZN5 1544 aa21.65■■□□□ 1.06
ALPK3-202ENST00000558077 EHBP1L1Q8N3D4 1523 aa21.63■■□□□ 1.05
ALPK3-202ENST00000558077 ARHGEF40Q8TER5 1519 aa21.63■■□□□ 1.05
ALPK3-202ENST00000558077 YEATS2Q9ULM3 1422 aa21.63■■□□□ 1.05
ALPK3-202ENST00000558077 TIAM1Q13009 1591 aa21.62■■□□□ 1.05
ALPK3-202ENST00000558077 ABCC1P33527 1531 aa21.61■■□□□ 1.05
ALPK3-202ENST00000558077 MAGI2Q86UL8 1455 aa21.6■■□□□ 1.05
ALPK3-202ENST00000558077 AFAP1Q8N556 730 aa21.6■■□□□ 1.05
ALPK3-202ENST00000558077 KDM5CP41229 1560 aa21.59■■□□□ 1.05
ALPK3-202ENST00000558077 SAMD9LQ8IVG5 1584 aa21.59■■□□□ 1.05
ALPK3-202ENST00000558077 SIGLEC1Q9BZZ2 1709 aa21.59■■□□□ 1.05
ALPK3-202ENST00000558077 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
ALPK3-202ENST00000558077 TRAPPC8Q9Y2L5 1435 aa21.58■■□□□ 1.05
ALPK3-202ENST00000558077 ITSN2Q9NZM3 1697 aa21.57■■□□□ 1.04
ALPK3-202ENST00000558077 MAP3K1Q13233 1512 aa21.57■■□□□ 1.04
ALPK3-202ENST00000558077 CCNB3Q8WWL7 1395 aa21.57■■□□□ 1.04
ALPK3-202ENST00000558077 ZNF518AQ6AHZ1 1483 aa21.57■■□□□ 1.04
ALPK3-202ENST00000558077 ADAMTSL3P82987 1691 aa21.55■■□□□ 1.04
ALPK3-202ENST00000558077 LRRC9Q6ZRR7 1453 aa21.54■■□□□ 1.04
ALPK3-202ENST00000558077 KANK4Q5T7N3 995 aaPredicted RBP21.54■■□□□ 1.04
ALPK3-202ENST00000558077 NCOA2Q15596 1464 aa21.53■■□□□ 1.04
ALPK3-202ENST00000558077 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.04
ALPK3-202ENST00000558077 CFDP1Q9UEE9 299 aaPredicted RBP21.52■■□□□ 1.04
ALPK3-202ENST00000558077 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
ALPK3-202ENST00000558077 SUPT6HQ7KZ85 1726 aaKnown RBP21.52■■□□□ 1.03
ALPK3-202ENST00000558077 MLH3Q9UHC1 1453 aa21.52■■□□□ 1.03
ALPK3-202ENST00000558077 KIAA1107Q9UPP5 1409 aa21.5■■□□□ 1.03
ALPK3-202ENST00000558077 ATP10AO60312 1499 aa21.5■■□□□ 1.03
ALPK3-202ENST00000558077 ZNF644Q9H582 1327 aaPredicted RBP21.5■■□□□ 1.03
ALPK3-202ENST00000558077 SYCP2Q9BX26 1530 aa21.5■■□□□ 1.03
ALPK3-202ENST00000558077 HNRNPMP52272 730 aaKnown RBP eCLIP21.49■■□□□ 1.03
ALPK3-202ENST00000558077 FBXO41Q8TF61 875 aa21.49■■□□□ 1.03
ALPK3-202ENST00000558077 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
ALPK3-202ENST00000558077 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
ALPK3-202ENST00000558077 DIP2CQ9Y2E4 1556 aa21.47■■□□□ 1.03
ALPK3-202ENST00000558077 ABCA6Q8N139 1617 aa21.46■■□□□ 1.03
ALPK3-202ENST00000558077 ARID4BQ4LE39 1312 aaPredicted RBP21.46■■□□□ 1.03
ALPK3-202ENST00000558077 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
ALPK3-202ENST00000558077 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.03
ALPK3-202ENST00000558077 MBD5Q9P267 1494 aa21.45■■□□□ 1.03
ALPK3-202ENST00000558077 MADDQ8WXG6 1647 aa21.43■■□□□ 1.02
ALPK3-202ENST00000558077 REREQ9P2R6 1566 aa21.42■■□□□ 1.02
ALPK3-202ENST00000558077 PTPRMP28827 1452 aa21.39■■□□□ 1.02
ALPK3-202ENST00000558077 INO80Q9ULG1 1556 aaPredicted RBP21.38■■□□□ 1.01
ALPK3-202ENST00000558077 SPAG9O60271 1321 aaKnown RBP21.37■■□□□ 1.01
ALPK3-202ENST00000558077 CAMSAP2Q08AD1 1489 aa21.37■■□□□ 1.01
ALPK3-202ENST00000558077 MYT1LQ9UL68 1186 aa21.36■■□□□ 1.01
ALPK3-202ENST00000558077 AGLP35573 1532 aa21.35■■□□□ 1.01
ALPK3-202ENST00000558077 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
ALPK3-202ENST00000558077 RIMS1Q86UR5 1692 aaKnown RBP21.35■■□□□ 1.01
ALPK3-202ENST00000558077 MLECQ14165 292 aa21.34■■□□□ 1.01
ALPK3-202ENST00000558077 MYOM3Q5VTT5 1437 aa21.33■■□□□ 1.01
ALPK3-202ENST00000558077 APLP2Q06481 763 aa21.32■■□□□ 1
ALPK3-202ENST00000558077 MIA2Q96PC5 1412 aa21.31■■□□□ 1
ALPK3-202ENST00000558077 FER1L4A9Z1Z3 1794 aa21.31■■□□□ 1
ALPK3-202ENST00000558077 ARHGEF5Q12774 1597 aa21.3■■□□□ 1
ALPK3-202ENST00000558077 RTEL1-TNFRSF6BF6WH68 1400 aa21.29■■□□□ 1
ALPK3-202ENST00000558077 CCDC141Q6ZP82 1450 aa21.29■■□□□ 1
ALPK3-202ENST00000558077 PLXNC1O60486 1568 aa21.28■■□□□ 1
ALPK3-202ENST00000558077 RSPH4AQ5TD94 716 aa21.27■■□□□ 1
ALPK3-202ENST00000558077 A2MP01023 1474 aa21.26■□□□□ 0.99
ALPK3-202ENST00000558077 ADGBQ8N7X0 1667 aa21.24■□□□□ 0.99
ALPK3-202ENST00000558077 MAST1Q9Y2H9 1570 aa21.2■□□□□ 0.98
ALPK3-202ENST00000558077 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.98
ALPK3-202ENST00000558077 DHX29Q7Z478 1369 aaKnown RBP21.2■□□□□ 0.98
ALPK3-202ENST00000558077 FGD6Q6ZV73 1430 aa21.2■□□□□ 0.98
ALPK3-202ENST00000558077 CEBPAP49715 358 aaPredicted RBP21.19■□□□□ 0.98
ALPK3-202ENST00000558077 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
ALPK3-202ENST00000558077 TSPY4P0CV99 314 aa21.17■□□□□ 0.98
ALPK3-202ENST00000558077 TSPY10P0CW01 314 aa21.17■□□□□ 0.98
ALPK3-202ENST00000558077 ABCC5O15440 1437 aa21.16■□□□□ 0.98
ALPK3-202ENST00000558077 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
ALPK3-202ENST00000558077 LMTK3Q96Q04 1460 aa21.15■□□□□ 0.98
ALPK3-202ENST00000558077 C3P01024 1663 aa21.15■□□□□ 0.98
ALPK3-202ENST00000558077 SETD1BQ9UPS6 1966 aaKnown RBP21.12■□□□□ 0.97
ALPK3-202ENST00000558077 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
ALPK3-202ENST00000558077 CROCC2H7BZ55 1655 aa21.11■□□□□ 0.97
ALPK3-202ENST00000558077 CNTLNQ9NXG0 1405 aa21.11■□□□□ 0.97
ALPK3-202ENST00000558077 MROH2AA6NES4 1674 aa21.1■□□□□ 0.97
ALPK3-202ENST00000558077 GGT6Q6P531 493 aa21.1■□□□□ 0.97
ALPK3-202ENST00000558077 DAPK1P53355 1430 aa21.1■□□□□ 0.97
ALPK3-202ENST00000558077 SHANK2Q9UPX8 1470 aa21.09■□□□□ 0.97
ALPK3-202ENST00000558077 CLTCQ00610 1675 aaKnown RBP21.09■□□□□ 0.97
ALPK3-202ENST00000558077 KIF3BO15066 747 aa21.08■□□□□ 0.97
ALPK3-202ENST00000558077 PPP6R1Q9UPN7 881 aa21.08■□□□□ 0.97
ALPK3-202ENST00000558077 ZMYM3Q14202 1370 aa21.07■□□□□ 0.96
ALPK3-202ENST00000558077 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
ALPK3-202ENST00000558077 ESF1Q9H501 851 aaKnown RBP21.05■□□□□ 0.96
ALPK3-202ENST00000558077 PREX1Q8TCU6 1659 aa21.04■□□□□ 0.96
ALPK3-202ENST00000558077 HSPA2P54652 639 aa21.03■□□□□ 0.96
ALPK3-202ENST00000558077 DUOX2Q9NRD8 1548 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms