RNA–Protein interactions for RNA: ENST00000558033.5

ALDH1A3-204, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 3

Gene ALDH1A3, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-204ENST00000558033 CDC42BPBQ9Y5S2 1711 aa31.66■■■□□ 2.66
ALDH1A3-204ENST00000558033 ZMYM4Q5VZL5 1548 aa31.66■■■□□ 2.66
ALDH1A3-204ENST00000558033 ARHGEF40Q8TER5 1519 aa31.66■■■□□ 2.66
ALDH1A3-204ENST00000558033 POGZQ7Z3K3 1410 aa31.65■■■□□ 2.66
ALDH1A3-204ENST00000558033 PREX2Q70Z35 1606 aa31.64■■■□□ 2.65
ALDH1A3-204ENST00000558033 CDC42BPAQ5VT25 1732 aa31.6■■■□□ 2.65
ALDH1A3-204ENST00000558033 YEATS2Q9ULM3 1422 aa31.58■■■□□ 2.65
ALDH1A3-204ENST00000558033 ZFYVE16Q7Z3T8 1539 aa31.57■■■□□ 2.64
ALDH1A3-204ENST00000558033 MAGI2Q86UL8 1455 aa31.54■■■□□ 2.64
ALDH1A3-204ENST00000558033 ADAMTSL3P82987 1691 aa31.51■■■□□ 2.64
ALDH1A3-204ENST00000558033 SIGLEC1Q9BZZ2 1709 aa31.51■■■□□ 2.63
ALDH1A3-204ENST00000558033 MTUS2Q5JR59 1369 aa31.51■■■□□ 2.63
ALDH1A3-204ENST00000558033 ABCC1P33527 1531 aa31.5■■■□□ 2.63
ALDH1A3-204ENST00000558033 BCORL1Q5H9F3 1711 aa31.5■■■□□ 2.63
ALDH1A3-204ENST00000558033 ZNF518AQ6AHZ1 1483 aa31.5■■■□□ 2.63
ALDH1A3-204ENST00000558033 ARHGEF12Q9NZN5 1544 aa31.49■■■□□ 2.63
ALDH1A3-204ENST00000558033 GPATCH8Q9UKJ3 1502 aaKnown RBP31.49■■■□□ 2.63
ALDH1A3-204ENST00000558033 KDM5CP41229 1560 aa31.48■■■□□ 2.63
ALDH1A3-204ENST00000558033 AFAP1Q8N556 730 aa31.48■■■□□ 2.63
ALDH1A3-204ENST00000558033 ARID4BQ4LE39 1312 aaPredicted RBP31.48■■■□□ 2.63
ALDH1A3-204ENST00000558033 EHBP1L1Q8N3D4 1523 aa31.46■■■□□ 2.63
ALDH1A3-204ENST00000558033 ITSN2Q9NZM3 1697 aa31.45■■■□□ 2.63
ALDH1A3-204ENST00000558033 VPS8Q8N3P4 1428 aa31.45■■■□□ 2.63
ALDH1A3-204ENST00000558033 TRAPPC8Q9Y2L5 1435 aa31.43■■■□□ 2.62
ALDH1A3-204ENST00000558033 SAMD9LQ8IVG5 1584 aa31.43■■■□□ 2.62
ALDH1A3-204ENST00000558033 CCNB3Q8WWL7 1395 aa31.41■■■□□ 2.62
ALDH1A3-204ENST00000558033 MADDQ8WXG6 1647 aa31.4■■■□□ 2.62
ALDH1A3-204ENST00000558033 ATP10AO60312 1499 aa31.4■■■□□ 2.62
ALDH1A3-204ENST00000558033 HECW2Q9P2P5 1572 aa31.39■■■□□ 2.62
ALDH1A3-204ENST00000558033 TIAM1Q13009 1591 aa31.39■■■□□ 2.61
ALDH1A3-204ENST00000558033 ZNF777Q9ULD5 760 aaPredicted RBP31.38■■■□□ 2.61
ALDH1A3-204ENST00000558033 PTPRMP28827 1452 aa31.36■■■□□ 2.61
ALDH1A3-204ENST00000558033 SYCP2Q9BX26 1530 aa31.35■■■□□ 2.61
ALDH1A3-204ENST00000558033 C9orf84Q5VXU9 1444 aa31.35■■■□□ 2.61
ALDH1A3-204ENST00000558033 MLH3Q9UHC1 1453 aa31.34■■■□□ 2.61
ALDH1A3-204ENST00000558033 CFDP1Q9UEE9 299 aaPredicted RBP31.34■■■□□ 2.61
ALDH1A3-204ENST00000558033 DIP2CQ9Y2E4 1556 aa31.34■■■□□ 2.61
ALDH1A3-204ENST00000558033 ABCA6Q8N139 1617 aa31.32■■■□□ 2.6
ALDH1A3-204ENST00000558033 RIMS1Q86UR5 1692 aaKnown RBP31.29■■■□□ 2.6
ALDH1A3-204ENST00000558033 HNRNPMP52272 730 aaKnown RBP eCLIP31.29■■■□□ 2.6
ALDH1A3-204ENST00000558033 MYT1LQ9UL68 1186 aa31.29■■■□□ 2.6
ALDH1A3-204ENST00000558033 KIDINS220Q9ULH0 1771 aa31.29■■■□□ 2.6
ALDH1A3-204ENST00000558033 SUPT6HQ7KZ85 1726 aaKnown RBP31.29■■■□□ 2.6
ALDH1A3-204ENST00000558033 NCOA2Q15596 1464 aa31.28■■■□□ 2.6
ALDH1A3-204ENST00000558033 KIAA1107Q9UPP5 1409 aa31.27■■■□□ 2.6
ALDH1A3-204ENST00000558033 MLECQ14165 292 aa31.27■■■□□ 2.6
ALDH1A3-204ENST00000558033 PLEKHH2Q8IVE3 1493 aa31.26■■■□□ 2.59
ALDH1A3-204ENST00000558033 LRRC9Q6ZRR7 1453 aa31.25■■■□□ 2.59
ALDH1A3-204ENST00000558033 ZNF644Q9H582 1327 aaPredicted RBP31.24■■■□□ 2.59
ALDH1A3-204ENST00000558033 REREQ9P2R6 1566 aa31.24■■■□□ 2.59
ALDH1A3-204ENST00000558033 MAP3K1Q13233 1512 aa31.22■■■□□ 2.59
ALDH1A3-204ENST00000558033 FER1L4A9Z1Z3 1794 aa31.21■■■□□ 2.59
ALDH1A3-204ENST00000558033 KANK4Q5T7N3 995 aaPredicted RBP31.19■■■□□ 2.58
ALDH1A3-204ENST00000558033 SPAG9O60271 1321 aaKnown RBP31.17■■■□□ 2.58
ALDH1A3-204ENST00000558033 MBD5Q9P267 1494 aa31.16■■■□□ 2.58
ALDH1A3-204ENST00000558033 INO80Q9ULG1 1556 aaPredicted RBP31.16■■■□□ 2.58
ALDH1A3-204ENST00000558033 ATP7AQ04656 1500 aa31.14■■■□□ 2.58
ALDH1A3-204ENST00000558033 AGLP35573 1532 aa31.14■■■□□ 2.57
ALDH1A3-204ENST00000558033 CAMSAP2Q08AD1 1489 aa31.1■■■□□ 2.57
ALDH1A3-204ENST00000558033 PLPPR3Q6T4P5 718 aa31.09■■■□□ 2.57
ALDH1A3-204ENST00000558033 PLXNC1O60486 1568 aa31.02■■■□□ 2.56
ALDH1A3-204ENST00000558033 CCDC141Q6ZP82 1450 aa31.01■■■□□ 2.56
ALDH1A3-204ENST00000558033 LMTK3Q96Q04 1460 aa31.01■■■□□ 2.56
ALDH1A3-204ENST00000558033 A2MP01023 1474 aa31.01■■■□□ 2.55
ALDH1A3-204ENST00000558033 CEBPAP49715 358 aaPredicted RBP30.98■■■□□ 2.55
ALDH1A3-204ENST00000558033 RTEL1-TNFRSF6BF6WH68 1400 aa30.98■■■□□ 2.55
ALDH1A3-204ENST00000558033 MYOM3Q5VTT5 1437 aa30.98■■■□□ 2.55
ALDH1A3-204ENST00000558033 ADGBQ8N7X0 1667 aa30.97■■■□□ 2.55
ALDH1A3-204ENST00000558033 APLP2Q06481 763 aa30.97■■■□□ 2.55
ALDH1A3-204ENST00000558033 ARHGEF5Q12774 1597 aa30.96■■■□□ 2.55
ALDH1A3-204ENST00000558033 MIA2Q96PC5 1412 aa30.92■■■□□ 2.54
ALDH1A3-204ENST00000558033 C3P01024 1663 aa30.91■■■□□ 2.54
ALDH1A3-204ENST00000558033 RSPH4AQ5TD94 716 aa30.91■■■□□ 2.54
ALDH1A3-204ENST00000558033 ESF1Q9H501 851 aaKnown RBP30.86■■■□□ 2.53
ALDH1A3-204ENST00000558033 CNTLNQ9NXG0 1405 aa30.86■■■□□ 2.53
ALDH1A3-204ENST00000558033 DHX29Q7Z478 1369 aaKnown RBP30.85■■■□□ 2.53
ALDH1A3-204ENST00000558033 PREX1Q8TCU6 1659 aa30.84■■■□□ 2.53
ALDH1A3-204ENST00000558033 HSPA2P54652 639 aa30.84■■■□□ 2.53
ALDH1A3-204ENST00000558033 MROH2AA6NES4 1674 aa30.82■■■□□ 2.52
ALDH1A3-204ENST00000558033 TSPY4P0CV99 314 aa30.82■■■□□ 2.52
ALDH1A3-204ENST00000558033 TSPY10P0CW01 314 aa30.82■■■□□ 2.52
ALDH1A3-204ENST00000558033 MAST1Q9Y2H9 1570 aa30.81■■■□□ 2.52
ALDH1A3-204ENST00000558033 GGT6Q6P531 493 aa30.81■■■□□ 2.52
ALDH1A3-204ENST00000558033 CLTCQ00610 1675 aaKnown RBP30.81■■■□□ 2.52
ALDH1A3-204ENST00000558033 PTPN23Q9H3S7 1636 aa30.8■■■□□ 2.52
ALDH1A3-204ENST00000558033 SETD1BQ9UPS6 1966 aaKnown RBP30.79■■■□□ 2.52
ALDH1A3-204ENST00000558033 FGD6Q6ZV73 1430 aa30.77■■■□□ 2.52
ALDH1A3-204ENST00000558033 ZMYM3Q14202 1370 aa30.76■■■□□ 2.51
ALDH1A3-204ENST00000558033 KIF3BO15066 747 aa30.73■■■□□ 2.51
ALDH1A3-204ENST00000558033 UHRF1BP1Q6BDS2 1440 aa30.73■■■□□ 2.51
ALDH1A3-204ENST00000558033 TCOF1Q13428 1488 aaKnown RBP30.72■■■□□ 2.51
ALDH1A3-204ENST00000558033 ABCC5O15440 1437 aa30.71■■■□□ 2.51
ALDH1A3-204ENST00000558033 CROCC2H7BZ55 1655 aa30.71■■■□□ 2.51
ALDH1A3-204ENST00000558033 PPP6R1Q9UPN7 881 aa30.69■■■□□ 2.5
ALDH1A3-204ENST00000558033 NPATQ14207 1427 aa30.67■■■□□ 2.5
ALDH1A3-204ENST00000558033 DNMT1P26358 1616 aaKnown RBP30.66■■■□□ 2.5
ALDH1A3-204ENST00000558033 SHANK2Q9UPX8 1470 aa30.66■■■□□ 2.5
ALDH1A3-204ENST00000558033 DAPK1P53355 1430 aa30.64■■■□□ 2.5
ALDH1A3-204ENST00000558033 PTPRKQ15262 1439 aa30.64■■■□□ 2.49
ALDH1A3-204ENST00000558033 KDM5DQ9BY66 1539 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms