RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ARHGAP5Q13017 1502 aa39.93■■■■□ 3.98
SMAD6-202ENST00000557916 CFAP74Q9C0B2 1584 aa39.93■■■■□ 3.98
SMAD6-202ENST00000557916 GPATCH8Q9UKJ3 1502 aaKnown RBP39.92■■■■□ 3.98
SMAD6-202ENST00000557916 AKNAQ7Z591 1439 aa39.92■■■■□ 3.98
SMAD6-202ENST00000557916 PREX2Q70Z35 1606 aa39.91■■■■□ 3.98
SMAD6-202ENST00000557916 CDC42BPAQ5VT25 1732 aa39.9■■■■□ 3.98
SMAD6-202ENST00000557916 CDC42BPBQ9Y5S2 1711 aa39.89■■■■□ 3.98
SMAD6-202ENST00000557916 CFDP1Q9UEE9 299 aaPredicted RBP39.82■■■■□ 3.97
SMAD6-202ENST00000557916 ADGRL1O94910 1474 aa39.8■■■■□ 3.96
SMAD6-202ENST00000557916 ZNF777Q9ULD5 760 aaPredicted RBP39.79■■■■□ 3.96
SMAD6-202ENST00000557916 RAPGEF3O95398 923 aa39.77■■■■□ 3.96
SMAD6-202ENST00000557916 SCAPERQ9BY12 1400 aa39.76■■■■□ 3.96
SMAD6-202ENST00000557916 DENND4BO75064 1496 aaPredicted RBP39.76■■■■□ 3.96
SMAD6-202ENST00000557916 ITSN2Q9NZM3 1697 aa39.75■■■■□ 3.95
SMAD6-202ENST00000557916 SAMD9LQ8IVG5 1584 aa39.66■■■■□ 3.94
SMAD6-202ENST00000557916 ABCC1P33527 1531 aa39.65■■■■□ 3.94
SMAD6-202ENST00000557916 MYOM3Q5VTT5 1437 aa39.64■■■■□ 3.94
SMAD6-202ENST00000557916 PPARGC1BQ86YN6 1023 aaKnown RBP39.64■■■■□ 3.94
SMAD6-202ENST00000557916 POGZQ7Z3K3 1410 aa39.64■■■■□ 3.94
SMAD6-202ENST00000557916 FRMPD1Q5SYB0 1578 aa39.63■■■■□ 3.94
SMAD6-202ENST00000557916 ZNF644Q9H582 1327 aaPredicted RBP39.62■■■■□ 3.93
SMAD6-202ENST00000557916 RICTORQ6R327 1708 aa39.61■■■■□ 3.93
SMAD6-202ENST00000557916 ARHGEF12Q9NZN5 1544 aa39.61■■■■□ 3.93
SMAD6-202ENST00000557916 PLEKHH2Q8IVE3 1493 aa39.61■■■■□ 3.93
SMAD6-202ENST00000557916 KIAA1107Q9UPP5 1409 aa39.58■■■■□ 3.93
SMAD6-202ENST00000557916 HNRNPMP52272 730 aaKnown RBP eCLIP39.57■■■■□ 3.93
SMAD6-202ENST00000557916 AFAP1Q8N556 730 aa39.57■■■■□ 3.92
SMAD6-202ENST00000557916 MIA2Q96PC5 1412 aa39.56■■■■□ 3.92
SMAD6-202ENST00000557916 ZNF518AQ6AHZ1 1483 aa39.56■■■■□ 3.92
SMAD6-202ENST00000557916 SYCP2Q9BX26 1530 aa39.55■■■■□ 3.92
SMAD6-202ENST00000557916 TRAPPC8Q9Y2L5 1435 aa39.55■■■■□ 3.92
SMAD6-202ENST00000557916 CAMSAP2Q08AD1 1489 aa39.52■■■■□ 3.92
SMAD6-202ENST00000557916 ZMYM4Q5VZL5 1548 aa39.5■■■■□ 3.91
SMAD6-202ENST00000557916 FGD6Q6ZV73 1430 aa39.46■■■■□ 3.91
SMAD6-202ENST00000557916 KDM5CP41229 1560 aa39.45■■■■□ 3.91
SMAD6-202ENST00000557916 MBD5Q9P267 1494 aa39.44■■■■□ 3.9
SMAD6-202ENST00000557916 MAGI2Q86UL8 1455 aa39.44■■■■□ 3.9
SMAD6-202ENST00000557916 MYT1LQ9UL68 1186 aa39.4■■■■□ 3.9
SMAD6-202ENST00000557916 PTPN23Q9H3S7 1636 aa39.38■■■■□ 3.9
SMAD6-202ENST00000557916 ZFYVE16Q7Z3T8 1539 aa39.38■■■■□ 3.89
SMAD6-202ENST00000557916 YEATS2Q9ULM3 1422 aa39.37■■■■□ 3.89
SMAD6-202ENST00000557916 RSPH4AQ5TD94 716 aa39.37■■■■□ 3.89
SMAD6-202ENST00000557916 MLH3Q9UHC1 1453 aa39.36■■■■□ 3.89
SMAD6-202ENST00000557916 SPAG9O60271 1321 aaKnown RBP39.36■■■■□ 3.89
SMAD6-202ENST00000557916 HECW2Q9P2P5 1572 aa39.35■■■■□ 3.89
SMAD6-202ENST00000557916 ARHGEF40Q8TER5 1519 aa39.34■■■■□ 3.89
SMAD6-202ENST00000557916 TCOF1Q13428 1488 aaKnown RBP39.33■■■■□ 3.89
SMAD6-202ENST00000557916 CCDC141Q6ZP82 1450 aa39.33■■■■□ 3.89
SMAD6-202ENST00000557916 ARHGEF5Q12774 1597 aa39.32■■■■□ 3.88
SMAD6-202ENST00000557916 FAM50AQ14320 339 aaKnown RBP39.26■■■■□ 3.88
SMAD6-202ENST00000557916 TSPY4P0CV99 314 aa39.24■■■■□ 3.87
SMAD6-202ENST00000557916 TSPY10P0CW01 314 aa39.24■■■■□ 3.87
SMAD6-202ENST00000557916 KIDINS220Q9ULH0 1771 aa39.24■■■■□ 3.87
SMAD6-202ENST00000557916 ATP10AO60312 1499 aa39.24■■■■□ 3.87
SMAD6-202ENST00000557916 ATP7AQ04656 1500 aa39.23■■■■□ 3.87
SMAD6-202ENST00000557916 INO80Q9ULG1 1556 aaPredicted RBP39.21■■■■□ 3.87
SMAD6-202ENST00000557916 DIP2CQ9Y2E4 1556 aa39.2■■■■□ 3.87
SMAD6-202ENST00000557916 RTEL1-TNFRSF6BF6WH68 1400 aa39.2■■■■□ 3.87
SMAD6-202ENST00000557916 ABCA6Q8N139 1617 aa39.19■■■■□ 3.86
SMAD6-202ENST00000557916 C9orf84Q5VXU9 1444 aa39.17■■■■□ 3.86
SMAD6-202ENST00000557916 ARID4BQ4LE39 1312 aaPredicted RBP39.16■■■■□ 3.86
SMAD6-202ENST00000557916 ABCC5O15440 1437 aa39.16■■■■□ 3.86
SMAD6-202ENST00000557916 DAPK1P53355 1430 aa39.14■■■■□ 3.86
SMAD6-202ENST00000557916 DNMT1P26358 1616 aaKnown RBP39.12■■■■□ 3.85
SMAD6-202ENST00000557916 MAST1Q9Y2H9 1570 aa39.08■■■■□ 3.85
SMAD6-202ENST00000557916 RRBP1Q9P2E9 1410 aaKnown RBP39.08■■■■□ 3.85
SMAD6-202ENST00000557916 SHANK2Q9UPX8 1470 aa39.07■■■■□ 3.84
SMAD6-202ENST00000557916 REREQ9P2R6 1566 aa39.06■■■■□ 3.84
SMAD6-202ENST00000557916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.06■■■■□ 3.84
SMAD6-202ENST00000557916 SIGLEC1Q9BZZ2 1709 aa39.05■■■■□ 3.84
SMAD6-202ENST00000557916 CROCC2H7BZ55 1655 aa39.05■■■■□ 3.84
SMAD6-202ENST00000557916 A2MP01023 1474 aa39.02■■■■□ 3.84
SMAD6-202ENST00000557916 CHIC2Q9UKJ5 165 aa39■■■■□ 3.83
SMAD6-202ENST00000557916 ADGBQ8N7X0 1667 aa39■■■■□ 3.83
SMAD6-202ENST00000557916 KDM4FA0A1W2PPD8 638 aa38.98■■■■□ 3.83
SMAD6-202ENST00000557916 DHX29Q7Z478 1369 aaKnown RBP38.96■■■■□ 3.83
SMAD6-202ENST00000557916 AGLP35573 1532 aa38.95■■■■□ 3.83
SMAD6-202ENST00000557916 MLECQ14165 292 aa38.95■■■■□ 3.83
SMAD6-202ENST00000557916 ITGAEP38570 1179 aa38.94■■■■□ 3.82
SMAD6-202ENST00000557916 PLXNC1O60486 1568 aa38.93■■■■□ 3.82
SMAD6-202ENST00000557916 BCORL1Q5H9F3 1711 aa38.93■■■■□ 3.82
SMAD6-202ENST00000557916 ANKRD30AQ9BXX3 1397 aa38.91■■■■□ 3.82
SMAD6-202ENST00000557916 PTPRKQ15262 1439 aa38.91■■■■□ 3.82
SMAD6-202ENST00000557916 RRP7BPQ9NSQ0 103 aa38.9■■■■□ 3.82
SMAD6-202ENST00000557916 KIF15Q9NS87 1388 aa38.88■■■■□ 3.81
SMAD6-202ENST00000557916 NCOA1Q15788 1441 aa38.87■■■■□ 3.81
SMAD6-202ENST00000557916 ADGRL2O95490 1459 aa38.86■■■■□ 3.81
SMAD6-202ENST00000557916 ADAMTSL3P82987 1691 aa38.84■■■■□ 3.81
SMAD6-202ENST00000557916 DUOX2Q9NRD8 1548 aa38.82■■■■□ 3.81
SMAD6-202ENST00000557916 KIF3BO15066 747 aa38.8■■■■□ 3.8
SMAD6-202ENST00000557916 ROCK1Q13464 1354 aa38.76■■■■□ 3.8
SMAD6-202ENST00000557916 GGT6Q6P531 493 aa38.76■■■■□ 3.8
SMAD6-202ENST00000557916 MADDQ8WXG6 1647 aa38.76■■■■□ 3.8
SMAD6-202ENST00000557916 ERBINQ96RT1 1412 aa38.71■■■■□ 3.79
SMAD6-202ENST00000557916 ESF1Q9H501 851 aaKnown RBP38.69■■■■□ 3.78
SMAD6-202ENST00000557916 EIF2AK4Q9P2K8 1649 aaKnown RBP38.68■■■■□ 3.78
SMAD6-202ENST00000557916 FER1L4A9Z1Z3 1794 aa38.68■■■■□ 3.78
SMAD6-202ENST00000557916 RIMS1Q86UR5 1692 aaKnown RBP38.65■■■■□ 3.78
SMAD6-202ENST00000557916 AEBP2Q6ZN18 517 aaPredicted RBP38.64■■■■□ 3.78
SMAD6-202ENST00000557916 PPP6R1Q9UPN7 881 aa38.64■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms