RNA–Protein interactions for RNA: ENST00000557711.5

ACTR10-216, Transcript of actin related protein 10 homolog, humanhuman

TSL 1 (best)

Gene ACTR10, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-216ENST00000557711 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
ACTR10-216ENST00000557711 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
ACTR10-216ENST00000557711 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.61
ACTR10-216ENST00000557711 CHGAP10645 457 aaKnown RBP11.26□□□□□ -0.61
ACTR10-216ENST00000557711 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
ACTR10-216ENST00000557711 KIF3CO14782 793 aa11.22□□□□□ -0.61
ACTR10-216ENST00000557711 PPP1R37O75864 691 aa11.21□□□□□ -0.61
ACTR10-216ENST00000557711 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
ACTR10-216ENST00000557711 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
ACTR10-216ENST00000557711 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
ACTR10-216ENST00000557711 DNAJC5Q9H3Z4 198 aa11.2□□□□□ -0.62
ACTR10-216ENST00000557711 ERBB3P21860 1342 aa11.19□□□□□ -0.62
ACTR10-216ENST00000557711 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
ACTR10-216ENST00000557711 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
ACTR10-216ENST00000557711 RYDENQ9NUL5 291 aaKnown RBP11.16□□□□□ -0.62
ACTR10-216ENST00000557711 NKX1-1Q15270 411 aaPredicted RBP11.13□□□□□ -0.63
ACTR10-216ENST00000557711 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
ACTR10-216ENST00000557711 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
ACTR10-216ENST00000557711 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
ACTR10-216ENST00000557711 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
ACTR10-216ENST00000557711 SPNS2Q8IVW8 549 aa11.12□□□□□ -0.63
ACTR10-216ENST00000557711 SLC34A2O95436 690 aa11.09□□□□□ -0.63
ACTR10-216ENST00000557711 DCAF8L2P0C7V8 631 aa11.09□□□□□ -0.63
ACTR10-216ENST00000557711 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
ACTR10-216ENST00000557711 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.64
ACTR10-216ENST00000557711 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
ACTR10-216ENST00000557711 ZNF687Q8N1G0 1237 aa11.05□□□□□ -0.64
ACTR10-216ENST00000557711 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
ACTR10-216ENST00000557711 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
ACTR10-216ENST00000557711 FOXK1P85037 733 aa11.04□□□□□ -0.64
ACTR10-216ENST00000557711 NUDT7P0C024 238 aa11.03□□□□□ -0.64
ACTR10-216ENST00000557711 PLPP6Q8IY26 295 aa11.01□□□□□ -0.65
ACTR10-216ENST00000557711 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
ACTR10-216ENST00000557711 DSG2Q14126 1118 aa10.99□□□□□ -0.65
ACTR10-216ENST00000557711 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
ACTR10-216ENST00000557711 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
ACTR10-216ENST00000557711 CRISPLD2Q9H0B8 497 aa10.95□□□□□ -0.66
ACTR10-216ENST00000557711 TBC1D12O60347 775 aa10.93□□□□□ -0.66
ACTR10-216ENST00000557711 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
ACTR10-216ENST00000557711 PDE4AP27815 886 aa10.91□□□□□ -0.66
ACTR10-216ENST00000557711 PBX2P40425 430 aa10.91□□□□□ -0.66
ACTR10-216ENST00000557711 PPP1R15BQ5SWA1 713 aa10.91□□□□□ -0.66
ACTR10-216ENST00000557711 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
ACTR10-216ENST00000557711 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.67
ACTR10-216ENST00000557711 KDM4FA0A1W2PPD8 638 aa10.89□□□□□ -0.67
ACTR10-216ENST00000557711 PTGER2P43116 358 aa10.88□□□□□ -0.67
ACTR10-216ENST00000557711 LSM11P83369 360 aaKnown RBP eCLIP10.87□□□□□ -0.67
ACTR10-216ENST00000557711 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
ACTR10-216ENST00000557711 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
ACTR10-216ENST00000557711 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
ACTR10-216ENST00000557711 RNF166Q96A37 237 aaPredicted RBP10.85□□□□□ -0.67
ACTR10-216ENST00000557711 DDX27Q96GQ7 796 aaKnown RBP10.84□□□□□ -0.67
ACTR10-216ENST00000557711 MYT1LQ9UL68 1186 aa10.84□□□□□ -0.67
ACTR10-216ENST00000557711 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
ACTR10-216ENST00000557711 POTEEQ6S8J3 1075 aa10.82□□□□□ -0.68
ACTR10-216ENST00000557711 PPP4R3BQ5MIZ7 849 aa10.82□□□□□ -0.68
ACTR10-216ENST00000557711 BBXQ8WY36 941 aaPredicted RBP10.82□□□□□ -0.68
ACTR10-216ENST00000557711 AXIN2Q9Y2T1 843 aa10.82□□□□□ -0.68
ACTR10-216ENST00000557711 MFSD10Q14728 455 aa10.81□□□□□ -0.68
ACTR10-216ENST00000557711 ARHGAP33O14559 1287 aa10.8□□□□□ -0.68
ACTR10-216ENST00000557711 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.68
ACTR10-216ENST00000557711 CADPS2Q86UW7 1296 aa10.76□□□□□ -0.69
ACTR10-216ENST00000557711 KCNH8Q96L42 1107 aa10.74□□□□□ -0.69
ACTR10-216ENST00000557711 ADGRD1Q6QNK2 874 aa10.73□□□□□ -0.69
ACTR10-216ENST00000557711 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
ACTR10-216ENST00000557711 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
ACTR10-216ENST00000557711 EVI5O60447 810 aa10.72□□□□□ -0.69
ACTR10-216ENST00000557711 PSEN2P49810 448 aa10.72□□□□□ -0.69
ACTR10-216ENST00000557711 TK2O00142 265 aa10.71□□□□□ -0.69
ACTR10-216ENST00000557711 MAP3K9P80192 1104 aa10.71□□□□□ -0.69
ACTR10-216ENST00000557711 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
ACTR10-216ENST00000557711 SPRYD3Q8NCJ5 442 aa10.7□□□□□ -0.7
ACTR10-216ENST00000557711 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
ACTR10-216ENST00000557711 FOSBP53539 338 aa10.69□□□□□ -0.7
ACTR10-216ENST00000557711 JPH4Q96JJ6 628 aa10.69□□□□□ -0.7
ACTR10-216ENST00000557711 KCNK17Q96T54 332 aa10.69□□□□□ -0.7
ACTR10-216ENST00000557711 EMILIN3Q9NT22 766 aa10.69□□□□□ -0.7
ACTR10-216ENST00000557711 BCL2L12Q9HB09 334 aa10.68□□□□□ -0.7
ACTR10-216ENST00000557711 NISCHQ9Y2I1 1504 aa10.65□□□□□ -0.71
ACTR10-216ENST00000557711 CAMK2BQ13554 666 aa10.65□□□□□ -0.71
ACTR10-216ENST00000557711 HRO43593 1189 aa10.64□□□□□ -0.71
ACTR10-216ENST00000557711 PTPREP23469 700 aa10.64□□□□□ -0.71
ACTR10-216ENST00000557711 ZDHHC16Q969W1 377 aa10.64□□□□□ -0.71
ACTR10-216ENST00000557711 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
ACTR10-216ENST00000557711 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
ACTR10-216ENST00000557711 PAXIP1Q6ZW49 1069 aaPredicted RBP10.6□□□□□ -0.71
ACTR10-216ENST00000557711 SLC4A5Q9BY07 1137 aa10.6□□□□□ -0.71
ACTR10-216ENST00000557711 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
ACTR10-216ENST00000557711 VPS9D1Q9Y2B5 631 aa10.6□□□□□ -0.71
ACTR10-216ENST00000557711 DPYSL4O14531 572 aa10.58□□□□□ -0.72
ACTR10-216ENST00000557711 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
ACTR10-216ENST00000557711 PHF14O94880 888 aa10.56□□□□□ -0.72
ACTR10-216ENST00000557711 FBXW7Q969H0 707 aa10.56□□□□□ -0.72
ACTR10-216ENST00000557711 HCSTQ9UBK5 93 aa10.56□□□□□ -0.72
ACTR10-216ENST00000557711 TYW1BQ6NUM6 668 aa10.56□□□□□ -0.72
ACTR10-216ENST00000557711 ZBED2Q9BTP6 218 aa10.56□□□□□ -0.72
ACTR10-216ENST00000557711 PPP1R3GB7ZBB8 358 aa10.52□□□□□ -0.72
ACTR10-216ENST00000557711 KCTD12Q96CX2 325 aaKnown RBP10.52□□□□□ -0.72
ACTR10-216ENST00000557711 EPAS1Q99814 870 aa10.52□□□□□ -0.72
ACTR10-216ENST00000557711 BHMG1C9JSJ3 638 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms