RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 FGD6Q6ZV73 1430 aa15.52■□□□□ 0.08
GABRB3-212ENST00000557641 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
GABRB3-212ENST00000557641 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
GABRB3-212ENST00000557641 ZCCHC11Q5TAX3 1644 aaKnown RBP15.51■□□□□ 0.07
GABRB3-212ENST00000557641 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
GABRB3-212ENST00000557641 KIF14Q15058 1648 aa15.5■□□□□ 0.07
GABRB3-212ENST00000557641 ABCC10Q5T3U5 1492 aa15.47■□□□□ 0.07
GABRB3-212ENST00000557641 ZBTB22O15209 634 aa15.47■□□□□ 0.07
GABRB3-212ENST00000557641 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
GABRB3-212ENST00000557641 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.06
GABRB3-212ENST00000557641 WDR7Q9Y4E6 1490 aa15.46■□□□□ 0.06
GABRB3-212ENST00000557641 GPATCH8Q9UKJ3 1502 aaKnown RBP15.45■□□□□ 0.06
GABRB3-212ENST00000557641 FAM50AQ14320 339 aaKnown RBP15.45■□□□□ 0.06
GABRB3-212ENST00000557641 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
GABRB3-212ENST00000557641 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
GABRB3-212ENST00000557641 ASXL2Q76L83 1435 aa15.43■□□□□ 0.06
GABRB3-212ENST00000557641 ITSN2Q9NZM3 1697 aa15.43■□□□□ 0.06
GABRB3-212ENST00000557641 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
GABRB3-212ENST00000557641 PTPN23Q9H3S7 1636 aa15.41■□□□□ 0.06
GABRB3-212ENST00000557641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.4■□□□□ 0.06
GABRB3-212ENST00000557641 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
GABRB3-212ENST00000557641 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
GABRB3-212ENST00000557641 MYCNP04198 464 aaPredicted RBP15.38■□□□□ 0.05
GABRB3-212ENST00000557641 PLCH2O75038 1416 aa15.37■□□□□ 0.05
GABRB3-212ENST00000557641 RSPH4AQ5TD94 716 aa15.36■□□□□ 0.05
GABRB3-212ENST00000557641 ARAP3Q8WWN8 1544 aa15.36■□□□□ 0.05
GABRB3-212ENST00000557641 EFCAB2Q5VUJ9 269 aa15.35■□□□□ 0.05
GABRB3-212ENST00000557641 CAMSAP2Q08AD1 1489 aa15.34■□□□□ 0.05
GABRB3-212ENST00000557641 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
GABRB3-212ENST00000557641 TTC37Q6PGP7 1564 aa15.34■□□□□ 0.05
GABRB3-212ENST00000557641 ITGAEP38570 1179 aa15.34■□□□□ 0.05
GABRB3-212ENST00000557641 PREX2Q70Z35 1606 aa15.34■□□□□ 0.05
GABRB3-212ENST00000557641 CDC42BPAQ5VT25 1732 aa15.34■□□□□ 0.05
GABRB3-212ENST00000557641 ABCA9Q8IUA7 1624 aa15.33■□□□□ 0.04
GABRB3-212ENST00000557641 ZNF777Q9ULD5 760 aaPredicted RBP15.33■□□□□ 0.04
GABRB3-212ENST00000557641 HRCP23327 699 aa15.32■□□□□ 0.04
GABRB3-212ENST00000557641 ZNF644Q9H582 1327 aaPredicted RBP15.32■□□□□ 0.04
GABRB3-212ENST00000557641 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
GABRB3-212ENST00000557641 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
GABRB3-212ENST00000557641 MYO5CQ9NQX4 1742 aa15.31■□□□□ 0.04
GABRB3-212ENST00000557641 DAPK1P53355 1430 aa15.3■□□□□ 0.04
GABRB3-212ENST00000557641 AKNAQ7Z591 1439 aa15.3■□□□□ 0.04
GABRB3-212ENST00000557641 ABCC5O15440 1437 aa15.29■□□□□ 0.04
GABRB3-212ENST00000557641 ROCK1Q13464 1354 aa15.29■□□□□ 0.04
GABRB3-212ENST00000557641 ACIN1Q9UKV3 1341 aaKnown RBP15.29■□□□□ 0.04
GABRB3-212ENST00000557641 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
GABRB3-212ENST00000557641 SETD5Q9C0A6 1442 aa15.28■□□□□ 0.04
GABRB3-212ENST00000557641 CDC42BPBQ9Y5S2 1711 aa15.28■□□□□ 0.04
GABRB3-212ENST00000557641 HFM1A2PYH4 1435 aa15.27■□□□□ 0.04
GABRB3-212ENST00000557641 PTPRKQ15262 1439 aa15.27■□□□□ 0.04
GABRB3-212ENST00000557641 DNAJC5Q9H3Z4 198 aa15.27■□□□□ 0.04
GABRB3-212ENST00000557641 GLI2P10070 1586 aa15.27■□□□□ 0.03
GABRB3-212ENST00000557641 ARHGEF5Q12774 1597 aa15.27■□□□□ 0.03
GABRB3-212ENST00000557641 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
GABRB3-212ENST00000557641 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
GABRB3-212ENST00000557641 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
GABRB3-212ENST00000557641 MBD5Q9P267 1494 aa15.26■□□□□ 0.03
GABRB3-212ENST00000557641 SHANK2Q9UPX8 1470 aa15.26■□□□□ 0.03
GABRB3-212ENST00000557641 SAMD9LQ8IVG5 1584 aa15.25■□□□□ 0.03
GABRB3-212ENST00000557641 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
GABRB3-212ENST00000557641 FANCAO15360 1455 aa15.24■□□□□ 0.03
GABRB3-212ENST00000557641 CCDC141Q6ZP82 1450 aa15.24■□□□□ 0.03
GABRB3-212ENST00000557641 HNRNPMP52272 730 aaKnown RBP eCLIP15.23■□□□□ 0.03
GABRB3-212ENST00000557641 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
GABRB3-212ENST00000557641 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
GABRB3-212ENST00000557641 ANKRD30AQ9BXX3 1397 aa15.22■□□□□ 0.03
GABRB3-212ENST00000557641 RAB3GAP2Q9H2M9 1393 aa15.22■□□□□ 0.03
GABRB3-212ENST00000557641 NAIPQ13075 1403 aa15.21■□□□□ 0.03
GABRB3-212ENST00000557641 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
GABRB3-212ENST00000557641 CFAP74Q9C0B2 1584 aa15.2■□□□□ 0.02
GABRB3-212ENST00000557641 ABCC1P33527 1531 aa15.2■□□□□ 0.02
GABRB3-212ENST00000557641 SYCP2Q9BX26 1530 aa15.2■□□□□ 0.02
GABRB3-212ENST00000557641 NEO1Q92859 1461 aa15.2■□□□□ 0.02
GABRB3-212ENST00000557641 NCOA1Q15788 1441 aa15.19■□□□□ 0.02
GABRB3-212ENST00000557641 C9orf84Q5VXU9 1444 aa15.19■□□□□ 0.02
GABRB3-212ENST00000557641 FAM69CQ0P6D2 419 aa15.19■□□□□ 0.02
GABRB3-212ENST00000557641 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
GABRB3-212ENST00000557641 DIP2BQ9P265 1576 aa15.18■□□□□ 0.02
GABRB3-212ENST00000557641 CROCC2H7BZ55 1655 aa15.17■□□□□ 0.02
GABRB3-212ENST00000557641 MAST1Q9Y2H9 1570 aa15.17■□□□□ 0.02
GABRB3-212ENST00000557641 ADGRL1O94910 1474 aa15.17■□□□□ 0.02
GABRB3-212ENST00000557641 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
GABRB3-212ENST00000557641 RRP7BPQ9NSQ0 103 aa15.17■□□□□ 0.02
GABRB3-212ENST00000557641 MAP3K4Q9Y6R4 1608 aa15.17■□□□□ 0.02
GABRB3-212ENST00000557641 ARHGEF12Q9NZN5 1544 aa15.17■□□□□ 0.02
GABRB3-212ENST00000557641 RTEL1-TNFRSF6BF6WH68 1400 aa15.16■□□□□ 0.02
GABRB3-212ENST00000557641 SCAPERQ9BY12 1400 aa15.16■□□□□ 0.02
GABRB3-212ENST00000557641 CLSPNQ9HAW4 1339 aa15.16■□□□□ 0.02
GABRB3-212ENST00000557641 GCC2Q8IWJ2 1684 aa15.14■□□□□ 0.01
GABRB3-212ENST00000557641 ADGBQ8N7X0 1667 aa15.14■□□□□ 0.01
GABRB3-212ENST00000557641 TEX14Q8IWB6 1497 aa15.14■□□□□ 0.01
GABRB3-212ENST00000557641 TRAPPC8Q9Y2L5 1435 aa15.13■□□□□ 0.01
GABRB3-212ENST00000557641 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
GABRB3-212ENST00000557641 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
GABRB3-212ENST00000557641 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
GABRB3-212ENST00000557641 KIF15Q9NS87 1388 aa15.11■□□□□ 0.01
GABRB3-212ENST00000557641 ANKRD50Q9ULJ7 1429 aa15.09■□□□□ 0.01
GABRB3-212ENST00000557641 AFAP1Q8N556 730 aa15.09■□□□□ 0.01
GABRB3-212ENST00000557641 PLXNC1O60486 1568 aa15.09■□□□□ 0.01
GABRB3-212ENST00000557641 POGZQ7Z3K3 1410 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms