RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 ADCY10Q96PN6 1610 aa14.55□□□□□ -0.08
RD3L-201ENST00000557640 DIP2BQ9P265 1576 aa14.55□□□□□ -0.08
RD3L-201ENST00000557640 ATN1P54259 1190 aaPredicted RBP14.54□□□□□ -0.08
RD3L-201ENST00000557640 FAM163AQ96GL9 167 aaPredicted RBP14.53□□□□□ -0.08
RD3L-201ENST00000557640 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.08
RD3L-201ENST00000557640 SCUBE2Q9NQ36 999 aa14.52□□□□□ -0.09
RD3L-201ENST00000557640 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
RD3L-201ENST00000557640 MAPKBP1O60336 1514 aa14.49□□□□□ -0.09
RD3L-201ENST00000557640 KIF12Q96FN5 646 aa14.48□□□□□ -0.09
RD3L-201ENST00000557640 TSPOAP1O95153 1857 aa14.47□□□□□ -0.09
RD3L-201ENST00000557640 ABCC10Q5T3U5 1492 aa14.47□□□□□ -0.09
RD3L-201ENST00000557640 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
RD3L-201ENST00000557640 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
RD3L-201ENST00000557640 KDM6BO15054 1643 aa14.42□□□□□ -0.1
RD3L-201ENST00000557640 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
RD3L-201ENST00000557640 PPRC1Q5VV67 1664 aaKnown RBP14.42□□□□□ -0.1
RD3L-201ENST00000557640 PROM2Q8N271 834 aa14.41□□□□□ -0.1
RD3L-201ENST00000557640 MAP3K13O43283 966 aa14.4□□□□□ -0.1
RD3L-201ENST00000557640 TRPC6Q9Y210 931 aa14.4□□□□□ -0.1
RD3L-201ENST00000557640 LCE2DQ5TA82 110 aaPredicted RBP14.39□□□□□ -0.11
RD3L-201ENST00000557640 MIER1Q8N108 512 aa14.39□□□□□ -0.11
RD3L-201ENST00000557640 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
RD3L-201ENST00000557640 CUL7Q14999 1698 aa14.38□□□□□ -0.11
RD3L-201ENST00000557640 POTEFA5A3E0 1075 aa14.37□□□□□ -0.11
RD3L-201ENST00000557640 TIE1P35590 1138 aa14.36□□□□□ -0.11
RD3L-201ENST00000557640 SEC24BO95487 1268 aa14.35□□□□□ -0.11
RD3L-201ENST00000557640 FAM69CQ0P6D2 419 aa14.34□□□□□ -0.11
RD3L-201ENST00000557640 KIAA0586Q9BVV6 1533 aa14.34□□□□□ -0.11
RD3L-201ENST00000557640 RASEFQ8IZ41 740 aa14.33□□□□□ -0.12
RD3L-201ENST00000557640 KDM4FA0A1W2PPD8 638 aa14.31□□□□□ -0.12
RD3L-201ENST00000557640 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
RD3L-201ENST00000557640 ABCC2Q92887 1545 aa14.28□□□□□ -0.12
RD3L-201ENST00000557640 COLQQ9Y215 455 aaPredicted RBP14.28□□□□□ -0.12
RD3L-201ENST00000557640 IGF1RP08069 1367 aa14.27□□□□□ -0.12
RD3L-201ENST00000557640 GLI2P10070 1586 aa14.25□□□□□ -0.13
RD3L-201ENST00000557640 IQGAP2Q13576 1575 aa14.25□□□□□ -0.13
RD3L-201ENST00000557640 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
RD3L-201ENST00000557640 DISP1Q96F81 1524 aa14.22□□□□□ -0.13
RD3L-201ENST00000557640 ASXL2Q76L83 1435 aa14.22□□□□□ -0.13
RD3L-201ENST00000557640 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
RD3L-201ENST00000557640 ZCCHC11Q5TAX3 1644 aaKnown RBP14.22□□□□□ -0.13
RD3L-201ENST00000557640 ADGRL1O94910 1474 aa14.21□□□□□ -0.13
RD3L-201ENST00000557640 COL17A1Q9UMD9 1497 aaPredicted RBP14.21□□□□□ -0.13
RD3L-201ENST00000557640 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
RD3L-201ENST00000557640 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
RD3L-201ENST00000557640 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
RD3L-201ENST00000557640 PTPRGP23470 1445 aa14.19□□□□□ -0.14
RD3L-201ENST00000557640 UHRF1BP1LA0JNW5 1464 aa14.18□□□□□ -0.14
RD3L-201ENST00000557640 KIAA0556O60303 1618 aa14.17□□□□□ -0.14
RD3L-201ENST00000557640 IER5LQ5T953 404 aa14.17□□□□□ -0.14
RD3L-201ENST00000557640 CDAN1Q8IWY9 1227 aa14.17□□□□□ -0.14
RD3L-201ENST00000557640 TNIKQ9UKE5 1360 aa14.17□□□□□ -0.14
RD3L-201ENST00000557640 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
RD3L-201ENST00000557640 TTBK1Q5TCY1 1321 aaPredicted RBP14.15□□□□□ -0.14
RD3L-201ENST00000557640 EPRSP07814 1512 aaKnown RBP14.15□□□□□ -0.14
RD3L-201ENST00000557640 HECW2Q9P2P5 1572 aa14.15□□□□□ -0.14
RD3L-201ENST00000557640 PLB1Q6P1J6 1458 aa14.15□□□□□ -0.14
RD3L-201ENST00000557640 CARMIL1Q5VZK9 1371 aa14.15□□□□□ -0.14
RD3L-201ENST00000557640 KDM5BQ9UGL1 1544 aa14.15□□□□□ -0.14
RD3L-201ENST00000557640 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
RD3L-201ENST00000557640 UGGT2Q9NYU1 1516 aa14.13□□□□□ -0.15
RD3L-201ENST00000557640 CTTNBP2Q8WZ74 1663 aa14.12□□□□□ -0.15
RD3L-201ENST00000557640 UACAQ9BZF9 1416 aa14.12□□□□□ -0.15
RD3L-201ENST00000557640 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
RD3L-201ENST00000557640 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
RD3L-201ENST00000557640 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
RD3L-201ENST00000557640 IFNL1Q8IU54 200 aa14.09□□□□□ -0.15
RD3L-201ENST00000557640 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
RD3L-201ENST00000557640 KIF21BO75037 1637 aa14.07□□□□□ -0.16
RD3L-201ENST00000557640 NUBP1P53384 320 aa14.06□□□□□ -0.16
RD3L-201ENST00000557640 CFAP43Q8NDM7 1665 aa14.05□□□□□ -0.16
RD3L-201ENST00000557640 ST18O60284 1047 aa14.05□□□□□ -0.16
RD3L-201ENST00000557640 PLCG2P16885 1265 aa14.05□□□□□ -0.16
RD3L-201ENST00000557640 WDR7Q9Y4E6 1490 aa14.05□□□□□ -0.16
RD3L-201ENST00000557640 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
RD3L-201ENST00000557640 ABCA8O94911 1581 aa14.04□□□□□ -0.16
RD3L-201ENST00000557640 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
RD3L-201ENST00000557640 RAPGEF2Q9Y4G8 1499 aa14.03□□□□□ -0.16
RD3L-201ENST00000557640 MAGI3Q5TCQ9 1506 aa13.97□□□□□ -0.17
RD3L-201ENST00000557640 IRX5P78411 483 aaPredicted RBP13.94□□□□□ -0.18
RD3L-201ENST00000557640 FRMPD1Q5SYB0 1578 aa13.94□□□□□ -0.18
RD3L-201ENST00000557640 ADAMTSL3P82987 1691 aa13.92□□□□□ -0.18
RD3L-201ENST00000557640 CD109Q6YHK3 1445 aa13.91□□□□□ -0.18
RD3L-201ENST00000557640 OCEL1Q9H607 264 aa13.91□□□□□ -0.18
RD3L-201ENST00000557640 ABCA9Q8IUA7 1624 aa13.9□□□□□ -0.18
RD3L-201ENST00000557640 DCAF8Q5TAQ9 597 aa13.89□□□□□ -0.19
RD3L-201ENST00000557640 GOLGA3Q08378 1498 aa13.87□□□□□ -0.19
RD3L-201ENST00000557640 PRXQ9BXM0 1461 aa13.87□□□□□ -0.19
RD3L-201ENST00000557640 ARAP3Q8WWN8 1544 aa13.87□□□□□ -0.19
RD3L-201ENST00000557640 SAMD9Q5K651 1589 aa13.87□□□□□ -0.19
RD3L-201ENST00000557640 BCORL1Q5H9F3 1711 aa13.87□□□□□ -0.19
RD3L-201ENST00000557640 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
RD3L-201ENST00000557640 MADDQ8WXG6 1647 aa13.86□□□□□ -0.19
RD3L-201ENST00000557640 SNPHO15079 494 aa13.86□□□□□ -0.19
RD3L-201ENST00000557640 PYGBP11216 843 aa13.86□□□□□ -0.19
RD3L-201ENST00000557640 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
RD3L-201ENST00000557640 TMEM121BQ9BXQ6 578 aaPredicted RBP13.85□□□□□ -0.19
RD3L-201ENST00000557640 ATP10BO94823 1461 aa13.83□□□□□ -0.2
RD3L-201ENST00000557640 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
RD3L-201ENST00000557640 PTPRMP28827 1452 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms