RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 RAPGEF3O95398 923 aa17.32■□□□□ 0.36
PSMC6-215ENST00000557517 BCORL1Q5H9F3 1711 aa17.31■□□□□ 0.36
PSMC6-215ENST00000557517 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
PSMC6-215ENST00000557517 ATP1B4Q9UN42 357 aaPredicted RBP17.3■□□□□ 0.36
PSMC6-215ENST00000557517 CDK11AQ9UQ88 783 aaPredicted RBP17.3■□□□□ 0.36
PSMC6-215ENST00000557517 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
PSMC6-215ENST00000557517 MADDQ8WXG6 1647 aa17.28■□□□□ 0.36
PSMC6-215ENST00000557517 FRMPD1Q5SYB0 1578 aa17.28■□□□□ 0.36
PSMC6-215ENST00000557517 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
PSMC6-215ENST00000557517 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
PSMC6-215ENST00000557517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.24■□□□□ 0.35
PSMC6-215ENST00000557517 PLCH2O75038 1416 aa17.23■□□□□ 0.35
PSMC6-215ENST00000557517 FANCAO15360 1455 aa17.22■□□□□ 0.35
PSMC6-215ENST00000557517 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.34
PSMC6-215ENST00000557517 DENND4BO75064 1496 aaPredicted RBP17.2■□□□□ 0.34
PSMC6-215ENST00000557517 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
PSMC6-215ENST00000557517 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
PSMC6-215ENST00000557517 CASKIN1Q8WXD9 1431 aa17.18■□□□□ 0.34
PSMC6-215ENST00000557517 TROQ12816 1431 aaPredicted RBP17.17■□□□□ 0.34
PSMC6-215ENST00000557517 HECW1Q76N89 1606 aa17.17■□□□□ 0.34
PSMC6-215ENST00000557517 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
PSMC6-215ENST00000557517 CLIP1P30622 1438 aa17.14■□□□□ 0.33
PSMC6-215ENST00000557517 SCAPERQ9BY12 1400 aa17.14■□□□□ 0.33
PSMC6-215ENST00000557517 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
PSMC6-215ENST00000557517 TTC37Q6PGP7 1564 aa17.14■□□□□ 0.33
PSMC6-215ENST00000557517 ZMYM4Q5VZL5 1548 aa17.11■□□□□ 0.33
PSMC6-215ENST00000557517 MAGI2Q86UL8 1455 aa17.11■□□□□ 0.33
PSMC6-215ENST00000557517 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
PSMC6-215ENST00000557517 HSPA2P54652 639 aa17.09■□□□□ 0.33
PSMC6-215ENST00000557517 CCDC18Q5T9S5 1454 aa17.09■□□□□ 0.33
PSMC6-215ENST00000557517 CFAP74Q9C0B2 1584 aa17.09■□□□□ 0.33
PSMC6-215ENST00000557517 POGZQ7Z3K3 1410 aa17.07■□□□□ 0.32
PSMC6-215ENST00000557517 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
PSMC6-215ENST00000557517 CERKQ8TCT0 537 aa17.07■□□□□ 0.32
PSMC6-215ENST00000557517 YEATS2Q9ULM3 1422 aa17.06■□□□□ 0.32
PSMC6-215ENST00000557517 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
PSMC6-215ENST00000557517 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
PSMC6-215ENST00000557517 FER1L4A9Z1Z3 1794 aa17.04■□□□□ 0.32
PSMC6-215ENST00000557517 KIF14Q15058 1648 aa17.03■□□□□ 0.32
PSMC6-215ENST00000557517 ATP10AO60312 1499 aa17.01■□□□□ 0.31
PSMC6-215ENST00000557517 ARHGAP5Q13017 1502 aa17■□□□□ 0.31
PSMC6-215ENST00000557517 ZNF518AQ6AHZ1 1483 aa16.99■□□□□ 0.31
PSMC6-215ENST00000557517 PREX1Q8TCU6 1659 aa16.99■□□□□ 0.31
PSMC6-215ENST00000557517 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
PSMC6-215ENST00000557517 LRRIQ1Q96JM4 1722 aa16.99■□□□□ 0.31
PSMC6-215ENST00000557517 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
PSMC6-215ENST00000557517 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
PSMC6-215ENST00000557517 GPATCH8Q9UKJ3 1502 aaKnown RBP16.96■□□□□ 0.31
PSMC6-215ENST00000557517 MLH3Q9UHC1 1453 aa16.96■□□□□ 0.31
PSMC6-215ENST00000557517 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.3
PSMC6-215ENST00000557517 MLECQ14165 292 aa16.95■□□□□ 0.3
PSMC6-215ENST00000557517 MYO5CQ9NQX4 1742 aa16.94■□□□□ 0.3
PSMC6-215ENST00000557517 ILDR2Q71H61 639 aa16.94■□□□□ 0.3
PSMC6-215ENST00000557517 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
PSMC6-215ENST00000557517 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
PSMC6-215ENST00000557517 C9orf84Q5VXU9 1444 aa16.94■□□□□ 0.3
PSMC6-215ENST00000557517 SOCS7O14512 581 aa16.93■□□□□ 0.3
PSMC6-215ENST00000557517 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
PSMC6-215ENST00000557517 KDM5CP41229 1560 aa16.93■□□□□ 0.3
PSMC6-215ENST00000557517 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
PSMC6-215ENST00000557517 DISP3Q9P2K9 1392 aa16.92■□□□□ 0.3
PSMC6-215ENST00000557517 SETD1BQ9UPS6 1966 aaKnown RBP16.92■□□□□ 0.3
PSMC6-215ENST00000557517 HNRNPMP52272 730 aaKnown RBP eCLIP16.92■□□□□ 0.3
PSMC6-215ENST00000557517 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
PSMC6-215ENST00000557517 KIAA1107Q9UPP5 1409 aa16.91■□□□□ 0.3
PSMC6-215ENST00000557517 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
PSMC6-215ENST00000557517 KCNA4P22459 653 aa16.89■□□□□ 0.29
PSMC6-215ENST00000557517 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
PSMC6-215ENST00000557517 ABCC1P33527 1531 aa16.88■□□□□ 0.29
PSMC6-215ENST00000557517 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
PSMC6-215ENST00000557517 PREX2Q70Z35 1606 aa16.88■□□□□ 0.29
PSMC6-215ENST00000557517 SPAG9O60271 1321 aaKnown RBP16.86■□□□□ 0.29
PSMC6-215ENST00000557517 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
PSMC6-215ENST00000557517 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
PSMC6-215ENST00000557517 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
PSMC6-215ENST00000557517 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
PSMC6-215ENST00000557517 PTPRTO14522 1441 aa16.84■□□□□ 0.29
PSMC6-215ENST00000557517 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
PSMC6-215ENST00000557517 REREQ9P2R6 1566 aa16.84■□□□□ 0.29
PSMC6-215ENST00000557517 AGLP35573 1532 aa16.83■□□□□ 0.28
PSMC6-215ENST00000557517 DIP2CQ9Y2E4 1556 aa16.82■□□□□ 0.28
PSMC6-215ENST00000557517 SAMD9LQ8IVG5 1584 aa16.81■□□□□ 0.28
PSMC6-215ENST00000557517 CDC42BPAQ5VT25 1732 aa16.81■□□□□ 0.28
PSMC6-215ENST00000557517 LTBP4Q8N2S1 1624 aa16.81■□□□□ 0.28
PSMC6-215ENST00000557517 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
PSMC6-215ENST00000557517 VPS8Q8N3P4 1428 aa16.8■□□□□ 0.28
PSMC6-215ENST00000557517 RSPH4AQ5TD94 716 aa16.8■□□□□ 0.28
PSMC6-215ENST00000557517 MBD5Q9P267 1494 aa16.8■□□□□ 0.28
PSMC6-215ENST00000557517 C3P01024 1663 aa16.79■□□□□ 0.28
PSMC6-215ENST00000557517 EHBP1L1Q8N3D4 1523 aa16.79■□□□□ 0.28
PSMC6-215ENST00000557517 SYCP2Q9BX26 1530 aa16.78■□□□□ 0.28
PSMC6-215ENST00000557517 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.28
PSMC6-215ENST00000557517 ABCA6Q8N139 1617 aa16.77■□□□□ 0.27
PSMC6-215ENST00000557517 ITSN2Q9NZM3 1697 aa16.76■□□□□ 0.27
PSMC6-215ENST00000557517 KANK4Q5T7N3 995 aaPredicted RBP16.76■□□□□ 0.27
PSMC6-215ENST00000557517 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
PSMC6-215ENST00000557517 NCOA2Q15596 1464 aa16.75■□□□□ 0.27
PSMC6-215ENST00000557517 RTEL1-TNFRSF6BF6WH68 1400 aa16.75■□□□□ 0.27
PSMC6-215ENST00000557517 TIAM1Q13009 1591 aa16.74■□□□□ 0.27
PSMC6-215ENST00000557517 CAPN15O75808 1086 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms