RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 LMTK3Q96Q04 1460 aa23.49■■□□□ 1.35
SLIRP-210ENST00000557431 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
SLIRP-210ENST00000557431 MLECQ14165 292 aa23.44■■□□□ 1.34
SLIRP-210ENST00000557431 SCAPERQ9BY12 1400 aa23.43■■□□□ 1.34
SLIRP-210ENST00000557431 PLCH2O75038 1416 aa23.42■■□□□ 1.34
SLIRP-210ENST00000557431 POGZQ7Z3K3 1410 aa23.42■■□□□ 1.34
SLIRP-210ENST00000557431 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
SLIRP-210ENST00000557431 CDC42BPBQ9Y5S2 1711 aa23.39■■□□□ 1.34
SLIRP-210ENST00000557431 HSPA2P54652 639 aa23.39■■□□□ 1.33
SLIRP-210ENST00000557431 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
SLIRP-210ENST00000557431 MAGI2Q86UL8 1455 aa23.36■■□□□ 1.33
SLIRP-210ENST00000557431 ARHGAP5Q13017 1502 aa23.34■■□□□ 1.33
SLIRP-210ENST00000557431 FBXO41Q8TF61 875 aa23.33■■□□□ 1.33
SLIRP-210ENST00000557431 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
SLIRP-210ENST00000557431 ATP10AO60312 1499 aa23.3■■□□□ 1.32
SLIRP-210ENST00000557431 ARHGEF12Q9NZN5 1544 aa23.3■■□□□ 1.32
SLIRP-210ENST00000557431 PREX1Q8TCU6 1659 aa23.29■■□□□ 1.32
SLIRP-210ENST00000557431 EFCAB2Q5VUJ9 269 aa23.29■■□□□ 1.32
SLIRP-210ENST00000557431 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
SLIRP-210ENST00000557431 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
SLIRP-210ENST00000557431 CDC42BPAQ5VT25 1732 aa23.28■■□□□ 1.32
SLIRP-210ENST00000557431 KDM5CP41229 1560 aa23.28■■□□□ 1.32
SLIRP-210ENST00000557431 ABCA6Q8N139 1617 aa23.28■■□□□ 1.32
SLIRP-210ENST00000557431 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
SLIRP-210ENST00000557431 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
SLIRP-210ENST00000557431 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
SLIRP-210ENST00000557431 CLIP1P30622 1438 aa23.25■■□□□ 1.31
SLIRP-210ENST00000557431 ZNF518AQ6AHZ1 1483 aa23.24■■□□□ 1.31
SLIRP-210ENST00000557431 CEBPAP49715 358 aaPredicted RBP23.24■■□□□ 1.31
SLIRP-210ENST00000557431 AFAP1Q8N556 730 aa23.24■■□□□ 1.31
SLIRP-210ENST00000557431 MYT1LQ9UL68 1186 aa23.22■■□□□ 1.31
SLIRP-210ENST00000557431 C3P01024 1663 aa23.21■■□□□ 1.31
SLIRP-210ENST00000557431 ABCC1P33527 1531 aa23.2■■□□□ 1.3
SLIRP-210ENST00000557431 STRCQ7RTU9 1775 aa23.19■■□□□ 1.3
SLIRP-210ENST00000557431 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
SLIRP-210ENST00000557431 TRAPPC8Q9Y2L5 1435 aa23.18■■□□□ 1.3
SLIRP-210ENST00000557431 SETD1BQ9UPS6 1966 aaKnown RBP23.18■■□□□ 1.3
SLIRP-210ENST00000557431 CASKIN1Q8WXD9 1431 aa23.16■■□□□ 1.3
SLIRP-210ENST00000557431 CCDC18Q5T9S5 1454 aa23.16■■□□□ 1.3
SLIRP-210ENST00000557431 REREQ9P2R6 1566 aa23.14■■□□□ 1.29
SLIRP-210ENST00000557431 SAMD9LQ8IVG5 1584 aa23.11■■□□□ 1.29
SLIRP-210ENST00000557431 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
SLIRP-210ENST00000557431 SUPT6HQ7KZ85 1726 aaKnown RBP23.11■■□□□ 1.29
SLIRP-210ENST00000557431 FYCO1Q9BQS8 1478 aa23.08■■□□□ 1.29
SLIRP-210ENST00000557431 SYCP2Q9BX26 1530 aa23.07■■□□□ 1.28
SLIRP-210ENST00000557431 CERKQ8TCT0 537 aa23.06■■□□□ 1.28
SLIRP-210ENST00000557431 ZNF777Q9ULD5 760 aaPredicted RBP23.05■■□□□ 1.28
SLIRP-210ENST00000557431 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
SLIRP-210ENST00000557431 AGLP35573 1532 aa23.04■■□□□ 1.28
SLIRP-210ENST00000557431 GPATCH8Q9UKJ3 1502 aaKnown RBP23■■□□□ 1.27
SLIRP-210ENST00000557431 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
SLIRP-210ENST00000557431 MROH2AA6NES4 1674 aa22.97■■□□□ 1.27
SLIRP-210ENST00000557431 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.275e-9■■■■■ 34.7
SLIRP-210ENST00000557431 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
SLIRP-210ENST00000557431 INO80Q9ULG1 1556 aaPredicted RBP22.96■■□□□ 1.27
SLIRP-210ENST00000557431 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
SLIRP-210ENST00000557431 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
SLIRP-210ENST00000557431 PLXNC1O60486 1568 aa22.9■■□□□ 1.26
SLIRP-210ENST00000557431 TIAM1Q13009 1591 aa22.9■■□□□ 1.26
SLIRP-210ENST00000557431 ADGBQ8N7X0 1667 aa22.88■■□□□ 1.25
SLIRP-210ENST00000557431 CAMSAP1Q5T5Y3 1602 aa22.88■■□□□ 1.25
SLIRP-210ENST00000557431 CNTLNQ9NXG0 1405 aa22.88■■□□□ 1.25
SLIRP-210ENST00000557431 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
SLIRP-210ENST00000557431 MYO3AQ8NEV4 1616 aa22.87■■□□□ 1.25
SLIRP-210ENST00000557431 MTUS2Q5JR59 1369 aa22.87■■□□□ 1.25
SLIRP-210ENST00000557431 CFDP1Q9UEE9 299 aaPredicted RBP22.86■■□□□ 1.25
SLIRP-210ENST00000557431 DMRT2Q9Y5R5 561 aa22.85■■□□□ 1.25
SLIRP-210ENST00000557431 LTBP4Q8N2S1 1624 aa22.85■■□□□ 1.25
SLIRP-210ENST00000557431 A2MP01023 1474 aa22.85■■□□□ 1.25
SLIRP-210ENST00000557431 ZNF142P52746 1687 aaPredicted RBP22.84■■□□□ 1.25
SLIRP-210ENST00000557431 PTPRTO14522 1441 aa22.84■■□□□ 1.25
SLIRP-210ENST00000557431 NCOA1Q15788 1441 aa22.84■■□□□ 1.25
SLIRP-210ENST00000557431 ZNF644Q9H582 1327 aaPredicted RBP22.83■■□□□ 1.25
SLIRP-210ENST00000557431 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
SLIRP-210ENST00000557431 ZMYM3Q14202 1370 aa22.83■■□□□ 1.25
SLIRP-210ENST00000557431 PLEKHH2Q8IVE3 1493 aa22.82■■□□□ 1.24
SLIRP-210ENST00000557431 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
SLIRP-210ENST00000557431 GGT6Q6P531 493 aa22.79■■□□□ 1.24
SLIRP-210ENST00000557431 NPATQ14207 1427 aa22.79■■□□□ 1.24
SLIRP-210ENST00000557431 CEP170BQ9Y4F5 1589 aaPredicted RBP22.78■■□□□ 1.24
SLIRP-210ENST00000557431 NCKAP5LQ9HCH0 1330 aa22.77■■□□□ 1.24
SLIRP-210ENST00000557431 MBD5Q9P267 1494 aa22.75■■□□□ 1.23
SLIRP-210ENST00000557431 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
SLIRP-210ENST00000557431 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
SLIRP-210ENST00000557431 DISP3Q9P2K9 1392 aa22.71■■□□□ 1.23
SLIRP-210ENST00000557431 POLR1AO95602 1720 aaPredicted RBP22.7■■□□□ 1.22
SLIRP-210ENST00000557431 CAMSAP2Q08AD1 1489 aa22.69■■□□□ 1.22
SLIRP-210ENST00000557431 ZNF335Q9H4Z2 1342 aaPredicted RBP22.69■■□□□ 1.22
SLIRP-210ENST00000557431 DNMT1P26358 1616 aaKnown RBP22.68■■□□□ 1.22
SLIRP-210ENST00000557431 NCOA2Q15596 1464 aa22.68■■□□□ 1.22
SLIRP-210ENST00000557431 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
SLIRP-210ENST00000557431 ILDR2Q71H61 639 aa22.67■■□□□ 1.22
SLIRP-210ENST00000557431 CFAP65Q6ZU64 1925 aaKnown RBP22.67■■□□□ 1.22
SLIRP-210ENST00000557431 PLA2R1Q13018 1463 aa22.65■■□□□ 1.22
SLIRP-210ENST00000557431 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
SLIRP-210ENST00000557431 CCDC141Q6ZP82 1450 aa22.65■■□□□ 1.22
SLIRP-210ENST00000557431 RTEL1-TNFRSF6BF6WH68 1400 aa22.64■■□□□ 1.21
SLIRP-210ENST00000557431 IQSEC2Q5JU85 1478 aa22.63■■□□□ 1.21
SLIRP-210ENST00000557431 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
SLIRP-210ENST00000557431 A2ML1A8K2U0 1454 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms