RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 RAPGEF3O95398 923 aa22.96■■□□□ 1.27
LGMN-215ENST00000557315 ARHGAP5Q13017 1502 aa22.95■■□□□ 1.26
LGMN-215ENST00000557315 ZMYM4Q5VZL5 1548 aa22.93■■□□□ 1.26
LGMN-215ENST00000557315 GPATCH8Q9UKJ3 1502 aaKnown RBP22.93■■□□□ 1.26
LGMN-215ENST00000557315 DENND4BO75064 1496 aaPredicted RBP22.93■■□□□ 1.26
LGMN-215ENST00000557315 ADGRL1O94910 1474 aa22.93■■□□□ 1.26
LGMN-215ENST00000557315 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
LGMN-215ENST00000557315 ABCC1P33527 1531 aa22.91■■□□□ 1.26
LGMN-215ENST00000557315 ARHGEF12Q9NZN5 1544 aa22.91■■□□□ 1.26
LGMN-215ENST00000557315 POGZQ7Z3K3 1410 aa22.91■■□□□ 1.26
LGMN-215ENST00000557315 SCAPERQ9BY12 1400 aa22.9■■□□□ 1.26
LGMN-215ENST00000557315 SAMD9LQ8IVG5 1584 aa22.89■■□□□ 1.26
LGMN-215ENST00000557315 MAP3K1Q13233 1512 aa22.89■■□□□ 1.26
LGMN-215ENST00000557315 ARHGEF40Q8TER5 1519 aa22.88■■□□□ 1.25
LGMN-215ENST00000557315 ITSN2Q9NZM3 1697 aa22.88■■□□□ 1.25
LGMN-215ENST00000557315 SIGLEC1Q9BZZ2 1709 aa22.88■■□□□ 1.25
LGMN-215ENST00000557315 LRRC9Q6ZRR7 1453 aa22.87■■□□□ 1.25
LGMN-215ENST00000557315 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
LGMN-215ENST00000557315 KDM5CP41229 1560 aa22.86■■□□□ 1.25
LGMN-215ENST00000557315 SUPT6HQ7KZ85 1726 aaKnown RBP22.85■■□□□ 1.25
LGMN-215ENST00000557315 NCOA2Q15596 1464 aa22.84■■□□□ 1.25
LGMN-215ENST00000557315 YEATS2Q9ULM3 1422 aa22.83■■□□□ 1.25
LGMN-215ENST00000557315 KANK4Q5T7N3 995 aaPredicted RBP22.83■■□□□ 1.25
LGMN-215ENST00000557315 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
LGMN-215ENST00000557315 ZFYVE16Q7Z3T8 1539 aa22.79■■□□□ 1.24
LGMN-215ENST00000557315 SYCP2Q9BX26 1530 aa22.79■■□□□ 1.24
LGMN-215ENST00000557315 CCNB3Q8WWL7 1395 aa22.78■■□□□ 1.24
LGMN-215ENST00000557315 ZNF518AQ6AHZ1 1483 aa22.78■■□□□ 1.24
LGMN-215ENST00000557315 MAGI2Q86UL8 1455 aa22.76■■□□□ 1.23
LGMN-215ENST00000557315 HECW2Q9P2P5 1572 aa22.76■■□□□ 1.23
LGMN-215ENST00000557315 AFAP1Q8N556 730 aa22.75■■□□□ 1.23
LGMN-215ENST00000557315 ABCA6Q8N139 1617 aa22.75■■□□□ 1.23
LGMN-215ENST00000557315 KIDINS220Q9ULH0 1771 aa22.74■■□□□ 1.23
LGMN-215ENST00000557315 DIP2CQ9Y2E4 1556 aa22.73■■□□□ 1.23
LGMN-215ENST00000557315 ZNF644Q9H582 1327 aaPredicted RBP22.72■■□□□ 1.23
LGMN-215ENST00000557315 ADAMTSL3P82987 1691 aa22.71■■□□□ 1.23
LGMN-215ENST00000557315 BCORL1Q5H9F3 1711 aa22.71■■□□□ 1.23
LGMN-215ENST00000557315 KIAA1107Q9UPP5 1409 aa22.71■■□□□ 1.23
LGMN-215ENST00000557315 MBD5Q9P267 1494 aa22.71■■□□□ 1.23
LGMN-215ENST00000557315 MLH3Q9UHC1 1453 aa22.71■■□□□ 1.23
LGMN-215ENST00000557315 CFDP1Q9UEE9 299 aaPredicted RBP22.7■■□□□ 1.22
LGMN-215ENST00000557315 ZNF777Q9ULD5 760 aaPredicted RBP22.69■■□□□ 1.22
LGMN-215ENST00000557315 INO80Q9ULG1 1556 aaPredicted RBP22.67■■□□□ 1.22
LGMN-215ENST00000557315 CAMSAP2Q08AD1 1489 aa22.66■■□□□ 1.22
LGMN-215ENST00000557315 PLEKHH2Q8IVE3 1493 aa22.66■■□□□ 1.22
LGMN-215ENST00000557315 HNRNPMP52272 730 aaKnown RBP eCLIP22.66■■□□□ 1.22
LGMN-215ENST00000557315 ATP10AO60312 1499 aa22.65■■□□□ 1.22
LGMN-215ENST00000557315 REREQ9P2R6 1566 aa22.64■■□□□ 1.22
LGMN-215ENST00000557315 MADDQ8WXG6 1647 aa22.63■■□□□ 1.21
LGMN-215ENST00000557315 C9orf84Q5VXU9 1444 aa22.63■■□□□ 1.21
LGMN-215ENST00000557315 MYOM3Q5VTT5 1437 aa22.62■■□□□ 1.21
LGMN-215ENST00000557315 ATP7AQ04656 1500 aa22.61■■□□□ 1.21
LGMN-215ENST00000557315 ARHGEF5Q12774 1597 aa22.59■■□□□ 1.21
LGMN-215ENST00000557315 MIA2Q96PC5 1412 aa22.57■■□□□ 1.2
LGMN-215ENST00000557315 PLXNC1O60486 1568 aa22.56■■□□□ 1.2
LGMN-215ENST00000557315 CCDC141Q6ZP82 1450 aa22.55■■□□□ 1.2
LGMN-215ENST00000557315 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
LGMN-215ENST00000557315 AGLP35573 1532 aa22.54■■□□□ 1.2
LGMN-215ENST00000557315 RIMS1Q86UR5 1692 aaKnown RBP22.54■■□□□ 1.2
LGMN-215ENST00000557315 PTPN23Q9H3S7 1636 aa22.53■■□□□ 1.2
LGMN-215ENST00000557315 SPAG9O60271 1321 aaKnown RBP22.53■■□□□ 1.2
LGMN-215ENST00000557315 APLP2Q06481 763 aa22.52■■□□□ 1.2
LGMN-215ENST00000557315 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
LGMN-215ENST00000557315 PTPRMP28827 1452 aa22.51■■□□□ 1.19
LGMN-215ENST00000557315 ARID4BQ4LE39 1312 aaPredicted RBP22.51■■□□□ 1.19
LGMN-215ENST00000557315 FGD6Q6ZV73 1430 aa22.5■■□□□ 1.19
LGMN-215ENST00000557315 TCOF1Q13428 1488 aaKnown RBP22.5■■□□□ 1.19
LGMN-215ENST00000557315 MAST1Q9Y2H9 1570 aa22.49■■□□□ 1.19
LGMN-215ENST00000557315 RTEL1-TNFRSF6BF6WH68 1400 aa22.48■■□□□ 1.19
LGMN-215ENST00000557315 CROCC2H7BZ55 1655 aa22.48■■□□□ 1.19
LGMN-215ENST00000557315 A2MP01023 1474 aa22.46■■□□□ 1.19
LGMN-215ENST00000557315 DNMT1P26358 1616 aaKnown RBP22.44■■□□□ 1.18
LGMN-215ENST00000557315 MYT1LQ9UL68 1186 aa22.44■■□□□ 1.18
LGMN-215ENST00000557315 MLECQ14165 292 aa22.43■■□□□ 1.18
LGMN-215ENST00000557315 ILDR1Q86SU0 546 aaPredicted RBP22.43■■□□□ 1.18
LGMN-215ENST00000557315 ABCC5O15440 1437 aa22.42■■□□□ 1.18
LGMN-215ENST00000557315 RSPH4AQ5TD94 716 aa22.39■■□□□ 1.17
LGMN-215ENST00000557315 SHANK2Q9UPX8 1470 aa22.38■■□□□ 1.17
LGMN-215ENST00000557315 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
LGMN-215ENST00000557315 DAPK1P53355 1430 aa22.37■■□□□ 1.17
LGMN-215ENST00000557315 DHX29Q7Z478 1369 aaKnown RBP22.36■■□□□ 1.17
LGMN-215ENST00000557315 C3P01024 1663 aa22.35■■□□□ 1.17
LGMN-215ENST00000557315 MROH2AA6NES4 1674 aa22.31■■□□□ 1.16
LGMN-215ENST00000557315 CLTCQ00610 1675 aaKnown RBP22.3■■□□□ 1.16
LGMN-215ENST00000557315 MROH1Q8NDA8 1641 aa22.3■■□□□ 1.16
LGMN-215ENST00000557315 RNF17Q9BXT8 1623 aaKnown RBP22.29■■□□□ 1.16
LGMN-215ENST00000557315 PTPRKQ15262 1439 aa22.29■■□□□ 1.16
LGMN-215ENST00000557315 TSPY4P0CV99 314 aa22.28■■□□□ 1.16
LGMN-215ENST00000557315 TSPY10P0CW01 314 aa22.28■■□□□ 1.16
LGMN-215ENST00000557315 EIF2AK4Q9P2K8 1649 aaKnown RBP22.28■■□□□ 1.16
LGMN-215ENST00000557315 CEBPAP49715 358 aaPredicted RBP22.27■■□□□ 1.16
LGMN-215ENST00000557315 LMTK3Q96Q04 1460 aa22.27■■□□□ 1.16
LGMN-215ENST00000557315 ADGRL2O95490 1459 aa22.26■■□□□ 1.15
LGMN-215ENST00000557315 DUOX2Q9NRD8 1548 aa22.25■■□□□ 1.15
LGMN-215ENST00000557315 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
LGMN-215ENST00000557315 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
LGMN-215ENST00000557315 NCOA1Q15788 1441 aa22.22■■□□□ 1.15
LGMN-215ENST00000557315 KIF3BO15066 747 aa22.21■■□□□ 1.15
LGMN-215ENST00000557315 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
LGMN-215ENST00000557315 RRBP1Q9P2E9 1410 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms